Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_F01
         (1195 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    56   6e-10
AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          30   0.046
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    24   3.0  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    24   3.0  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    23   4.0  
AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.            23   5.3  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 56.0 bits (129), Expect = 6e-10
 Identities = 33/65 (50%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
 Frame = +2

Query: 155 HSVGPAAMG------TVVAGXLKVLGINGLRVVDAXVMPKIIRGNTNAPVVMIAEIAADL 316
           H  G A MG       VV+  LKV GI GLRV DA V P++I GN  A V M+ E AAD 
Sbjct: 544 HQTGTAKMGPSYDPMAVVSPRLKVHGIRGLRVADASVQPQVISGNPVASVNMVGERAADF 603

Query: 317 IKEHY 331
           IKE +
Sbjct: 604 IKEDW 608



 Score = 22.6 bits (46), Expect = 7.0
 Identities = 10/40 (25%), Positives = 19/40 (47%)
 Frame = +3

Query: 6   LAPTRAFLTTSLSXQKLHALLKPXGXSLQSFHSACIGFNV 125
           L+  RAF+T   +   LH ++      +++ +    G NV
Sbjct: 263 LSSARAFITPFENRSNLHVIVNATVTKVRTLNKRATGVNV 302


>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 29.9 bits (64), Expect = 0.046
 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 53  IARVAQTLXLXLAVISQRVHWIQCLSRALVP-SAWHSVGPAA 175
           +AR  Q L +  AVI     WI  LS +L P   W S GP A
Sbjct: 3   VARPMQALSIRHAVILASFVWIYALSLSLPPLFGWGSYGPEA 44


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 88  KLQPQGLSNACNFCXERE 35
           K+ P  LS  CN C E++
Sbjct: 62  KILPDALSTGCNKCNEKQ 79


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 23.8 bits (49), Expect = 3.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 88  KLQPQGLSNACNFCXERE 35
           K+ P  LS  CN C E++
Sbjct: 62  KILPDALSTGCNKCNEKQ 79


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 88  KLQPQGLSNACNFCXEREV 32
           +L P+ L+N CN C  R++
Sbjct: 55  ELLPEVLNNHCNRCTSRQI 73


>AB252421-1|BAE80739.1|  122|Apis mellifera GB15078 protein.
          Length = 122

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -2

Query: 171 AGPTECQADGTSALDR 124
           AG  ECQAD   A+DR
Sbjct: 95  AGYYECQADNQYAVDR 110


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,125
Number of Sequences: 438
Number of extensions: 3707
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 40729338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)