Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_E23
         (1137 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass...    34   0.16 
Z78418-1|CAB01696.1|  245|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z81130-4|CAB03414.2|  512|Caenorhabditis elegans Hypothetical pr...    31   1.5  
Z95621-1|CAB09130.1|  357|Caenorhabditis elegans Hypothetical pr...    31   2.0  
Z35597-4|CAA84647.2|  548|Caenorhabditis elegans Hypothetical pr...    29   6.1  

>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 278 protein.
          Length = 1130

 Score = 34.3 bits (75), Expect = 0.16
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +2

Query: 362 LNEKXGN-EKQLQXTWKVLTVLKNNNQPIIRKXQLMRTHFGDYRAKMASEEKKLSKNVLR 538
           L +K  N EK++Q   K L  +K      IR+   + + F +YR K   +E++L +    
Sbjct: 340 LEKKLHNKEKEVQTLTKELDQVKTETNDKIRRLTEVTSEFAEYRKKFQQQEEELRRKARL 399

Query: 539 ITLIYA 556
           +T++ A
Sbjct: 400 LTVVEA 405


>Z78418-1|CAB01696.1|  245|Caenorhabditis elegans Hypothetical
           protein F25D7.1 protein.
          Length = 245

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -2

Query: 656 TLCYQFCYFLLNTVVNVWFDAKLGNHYLPWFISG 555
           ++ Y +C    +T+V+ WF  +    YLPW + G
Sbjct: 127 SVLYVWCQVNKDTIVSFWFGMRFPARYLPWVLWG 160


>Z81130-4|CAB03414.2|  512|Caenorhabditis elegans Hypothetical
           protein T23G11.5 protein.
          Length = 512

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
 Frame = +2

Query: 182 LSNLINXXPQPTSLHNXGKSTSLQQPCKIXKHASEGVAPEX--SLRQFQLELCWCI---Q 346
           L  L++  PQ  SL     S  ++   +    A++G+  E   + RQ   ELCW +   +
Sbjct: 383 LKQLVDAAPQVVSLDTTADSRCIEMYEEKQLMATQGMLREDVSAERQRVAELCWRLHNCK 442

Query: 347 QLXRTLNEKXGNEK---QLQXTWKVLTVLKN-NNQPIIRKXQLMRTHFGDYRAKMASEEK 514
           QL     E+  N+K   + +  W     L+      ++ +   +R+   D RA++  E +
Sbjct: 443 QLVNENEEENTNKKIDFEEEQEWTERCKLEEAARSALLEEITRLRSTCADLRARL--EME 500

Query: 515 KLSKNVLR 538
            LSK V++
Sbjct: 501 SLSKEVMK 508


>Z95621-1|CAB09130.1|  357|Caenorhabditis elegans Hypothetical
           protein VC27A7L.1 protein.
          Length = 357

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
 Frame = +3

Query: 675 TYRETLRITILKKQTKTVQKNLSSLFQ--VLNLNLISMSMIVDFHFV 809
           T    L++  + K TKT+ +NL  LFQ  +LN N  ++  +  F FV
Sbjct: 269 TIHSKLKVVDMSKNTKTMHRNLLGLFQSSILN-NFTAVIAVAAFSFV 314


>Z35597-4|CAA84647.2|  548|Caenorhabditis elegans Hypothetical
           protein C36E8.4 protein.
          Length = 548

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +3

Query: 570 WKIVVAQFGIKPHIHNSIKKKITKLVTQSLLSPMTTYRETLR 695
           W  V  QF I   IH+++   IT+ + Q L S  +  ++T+R
Sbjct: 110 WTNVAEQFDIHATIHSNLGSAITEDIIQPLRSIQSNQQKTIR 151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,965,697
Number of Sequences: 27780
Number of extensions: 264452
Number of successful extensions: 607
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3078165110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)