BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_E18
(1247 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT010012-1|AAQ22481.1| 809|Drosophila melanogaster RE18408p pro... 400 e-111
AE014296-1106|AAF50668.2| 809|Drosophila melanogaster CG10173-P... 400 e-111
AY515709-1|AAR99659.1| 721|Drosophila melanogaster bestrophin 1... 253 3e-67
AY061546-1|AAL29094.1| 721|Drosophila melanogaster LP05915p pro... 253 3e-67
AF218817-1|AAF32327.1| 721|Drosophila melanogaster Dbest protein. 253 3e-67
AE014297-1109|AAF54503.1| 721|Drosophila melanogaster CG6264-PA... 253 3e-67
BT023181-1|AAY55597.1| 535|Drosophila melanogaster IP03329p pro... 246 5e-65
BT023144-1|AAY55560.1| 535|Drosophila melanogaster IP03529p pro... 246 5e-65
AE014296-2496|AAF49648.1| 535|Drosophila melanogaster CG12327-P... 246 5e-65
AE014296-2495|AAF49649.2| 460|Drosophila melanogaster CG7259-PA... 190 5e-48
BT025894-1|ABG02138.1| 113|Drosophila melanogaster IP02836p pro... 50 9e-06
AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC... 31 3.3
AY118377-1|AAM48406.1| 1265|Drosophila melanogaster RE24170p pro... 30 7.6
>BT010012-1|AAQ22481.1| 809|Drosophila melanogaster RE18408p protein.
Length = 809
Score = 400 bits (984), Expect = e-111
Identities = 188/250 (75%), Positives = 208/250 (83%), Gaps = 5/250 (2%)
Frame = +1
Query: 343 MTISYAGEVPNGSSFGCFWRILCKWRGSVYKLVWREXXXXXXXXXXXXXXXRFALTEQQQ 522
MT+SYAGEVPNGSSFGCFW+IL KWRGSVYKL+WRE RF LTE QQ
Sbjct: 1 MTVSYAGEVPNGSSFGCFWKILWKWRGSVYKLIWRELVAYLCLYYTINVIYRFGLTESQQ 60
Query: 523 RVFEKVRQYFGAQSESIPMSFVLGFYVSLVVKRWWEQYKLLPWPDTLALFISAGIPGAD- 699
+F+K+R YFG QSESIPMSFVLGFYV+LVVKRWWEQY+LLPWPDTLALFISA IP ++
Sbjct: 61 AIFKKIRLYFGQQSESIPMSFVLGFYVNLVVKRWWEQYRLLPWPDTLALFISAAIPNSNG 120
Query: 700 ----ETGRLMRRNIVRYAILAYVITLQRVSLRVKRRFPTWQHVVDSGLMLESERKVFEKM 867
ETGRLMRRNI+RY +LAYVITLQR+SLRVKRRFPT QH+VD+GLM ESE K+FE +
Sbjct: 121 GVNNETGRLMRRNIMRYMVLAYVITLQRISLRVKRRFPTTQHLVDAGLMHESEMKIFEAL 180
Query: 868 DGKSPMSKYWMPLVWATNIINRARKEGLITSDHIVQTXLVELSDIXRXWGALMGYDTXCV 1047
+ KSPMSKYWMPLVWATNIINRARK+GLI SDHIVQT LVELSDI R G L+GYDT CV
Sbjct: 181 NQKSPMSKYWMPLVWATNIINRARKDGLIASDHIVQTILVELSDIRRRLGGLIGYDTVCV 240
Query: 1048 PLVYTQXVTL 1077
PLVYTQ VTL
Sbjct: 241 PLVYTQVVTL 250
>AE014296-1106|AAF50668.2| 809|Drosophila melanogaster CG10173-PA
protein.
Length = 809
Score = 400 bits (984), Expect = e-111
Identities = 188/250 (75%), Positives = 208/250 (83%), Gaps = 5/250 (2%)
Frame = +1
Query: 343 MTISYAGEVPNGSSFGCFWRILCKWRGSVYKLVWREXXXXXXXXXXXXXXXRFALTEQQQ 522
MT+SYAGEVPNGSSFGCFW+IL KWRGSVYKL+WRE RF LTE QQ
Sbjct: 1 MTVSYAGEVPNGSSFGCFWKILWKWRGSVYKLIWRELVAYLCLYYTINVIYRFGLTESQQ 60
Query: 523 RVFEKVRQYFGAQSESIPMSFVLGFYVSLVVKRWWEQYKLLPWPDTLALFISAGIPGAD- 699
+F+K+R YFG QSESIPMSFVLGFYV+LVVKRWWEQY+LLPWPDTLALFISA IP ++
Sbjct: 61 AIFKKIRLYFGQQSESIPMSFVLGFYVNLVVKRWWEQYRLLPWPDTLALFISAAIPNSNG 120
Query: 700 ----ETGRLMRRNIVRYAILAYVITLQRVSLRVKRRFPTWQHVVDSGLMLESERKVFEKM 867
ETGRLMRRNI+RY +LAYVITLQR+SLRVKRRFPT QH+VD+GLM ESE K+FE +
Sbjct: 121 GVNNETGRLMRRNIMRYMVLAYVITLQRISLRVKRRFPTTQHLVDAGLMHESEMKIFEAL 180
Query: 868 DGKSPMSKYWMPLVWATNIINRARKEGLITSDHIVQTXLVELSDIXRXWGALMGYDTXCV 1047
+ KSPMSKYWMPLVWATNIINRARK+GLI SDHIVQT LVELSDI R G L+GYDT CV
Sbjct: 181 NQKSPMSKYWMPLVWATNIINRARKDGLIASDHIVQTILVELSDIRRRLGGLIGYDTVCV 240
Query: 1048 PLVYTQXVTL 1077
PLVYTQ VTL
Sbjct: 241 PLVYTQVVTL 250
>AY515709-1|AAR99659.1| 721|Drosophila melanogaster bestrophin 1
protein.
Length = 721
Score = 253 bits (620), Expect = 3e-67
Identities = 119/252 (47%), Positives = 160/252 (63%), Gaps = 1/252 (0%)
Frame = +1
Query: 343 MTISYAGEVPNGSSFGCFWRILCKWRGSVYKLVWREXXXXXXXXXXXXXXXRFALTEQQQ 522
MTI+Y GEV FGCF ++L +WRGS+YKLVW + RF L Q+
Sbjct: 1 MTITYTGEVATCRGFGCFLKLLLRWRGSIYKLVWLDLLAFLTIYYAINMVYRFGLNPAQK 60
Query: 523 RVFEKVRQYFGAQSESIPMSFVLGFYVSLVVKRWWEQYKLLPWPDTLALFISAGIPGADE 702
FE + QY + E IP+SFVLGFYVS+V+ RWW QY +PWPD +A+F+S+ + G DE
Sbjct: 61 ETFEAIVQYCDSYRELIPLSFVLGFYVSIVMTRWWNQYTSIPWPDPIAVFVSSNVHGQDE 120
Query: 703 TGRLMRRNIVRYAILAYVITLQRVSLRVKRRFPTWQHVVDSGLMLESERKVFEKMDGKSP 882
GR+MRR I+RY L + L VS RVK+RFP ++V++GL+ ++E+ + E M+ P
Sbjct: 121 RGRMMRRTIMRYVCLCLTMVLANVSPRVKKRFPGLNNLVEAGLLNDNEKTIIETMNKAFP 180
Query: 883 M-SKYWMPLVWATNIINRARKEGLITSDHIVQTXLVELSDIXRXWGALMGYDTXCVPLVY 1059
SK+W+P+VWA +II RARKEG I D V+T + EL+ G L+ YDT VPLVY
Sbjct: 181 RPSKHWLPIVWAASIITRARKEGRIRDDFAVKTIIDELNKFRGQCGLLISYDTISVPLVY 240
Query: 1060 TQXVTLSXVHLF 1095
TQ VTL+ F
Sbjct: 241 TQVVTLAVYSYF 252
>AY061546-1|AAL29094.1| 721|Drosophila melanogaster LP05915p protein.
Length = 721
Score = 253 bits (620), Expect = 3e-67
Identities = 119/252 (47%), Positives = 160/252 (63%), Gaps = 1/252 (0%)
Frame = +1
Query: 343 MTISYAGEVPNGSSFGCFWRILCKWRGSVYKLVWREXXXXXXXXXXXXXXXRFALTEQQQ 522
MTI+Y GEV FGCF ++L +WRGS+YKLVW + RF L Q+
Sbjct: 1 MTITYTGEVATCRGFGCFLKLLLRWRGSIYKLVWLDLLAFLTIYYAINMVYRFGLNPAQK 60
Query: 523 RVFEKVRQYFGAQSESIPMSFVLGFYVSLVVKRWWEQYKLLPWPDTLALFISAGIPGADE 702
FE + QY + E IP+SFVLGFYVS+V+ RWW QY +PWPD +A+F+S+ + G DE
Sbjct: 61 ETFEAIVQYCDSYRELIPLSFVLGFYVSIVMTRWWNQYTSIPWPDPIAVFVSSNVHGQDE 120
Query: 703 TGRLMRRNIVRYAILAYVITLQRVSLRVKRRFPTWQHVVDSGLMLESERKVFEKMDGKSP 882
GR+MRR I+RY L + L VS RVK+RFP ++V++GL+ ++E+ + E M+ P
Sbjct: 121 RGRMMRRTIMRYVCLCLTMVLANVSPRVKKRFPGLNNLVEAGLLNDNEKTIIETMNKAFP 180
Query: 883 M-SKYWMPLVWATNIINRARKEGLITSDHIVQTXLVELSDIXRXWGALMGYDTXCVPLVY 1059
SK+W+P+VWA +II RARKEG I D V+T + EL+ G L+ YDT VPLVY
Sbjct: 181 RPSKHWLPIVWAASIITRARKEGRIRDDFAVKTIIDELNKFRGQCGLLISYDTISVPLVY 240
Query: 1060 TQXVTLSXVHLF 1095
TQ VTL+ F
Sbjct: 241 TQVVTLAVYSYF 252
>AF218817-1|AAF32327.1| 721|Drosophila melanogaster Dbest protein.
Length = 721
Score = 253 bits (620), Expect = 3e-67
Identities = 119/252 (47%), Positives = 160/252 (63%), Gaps = 1/252 (0%)
Frame = +1
Query: 343 MTISYAGEVPNGSSFGCFWRILCKWRGSVYKLVWREXXXXXXXXXXXXXXXRFALTEQQQ 522
MTI+Y GEV FGCF ++L +WRGS+YKLVW + RF L Q+
Sbjct: 1 MTITYTGEVATCRGFGCFLKLLLRWRGSIYKLVWLDLLAFLTIYYAINMVYRFGLNPAQK 60
Query: 523 RVFEKVRQYFGAQSESIPMSFVLGFYVSLVVKRWWEQYKLLPWPDTLALFISAGIPGADE 702
FE + QY + E IP+SFVLGFYVS+V+ RWW QY +PWPD +A+F+S+ + G DE
Sbjct: 61 ETFEAIVQYCDSYRELIPLSFVLGFYVSIVMTRWWNQYTSIPWPDPIAVFVSSNVHGQDE 120
Query: 703 TGRLMRRNIVRYAILAYVITLQRVSLRVKRRFPTWQHVVDSGLMLESERKVFEKMDGKSP 882
GR+MRR I+RY L + L VS RVK+RFP ++V++GL+ ++E+ + E M+ P
Sbjct: 121 RGRMMRRTIMRYVCLCLTMVLANVSPRVKKRFPGLNNLVEAGLLNDNEKTIIETMNKAFP 180
Query: 883 M-SKYWMPLVWATNIINRARKEGLITSDHIVQTXLVELSDIXRXWGALMGYDTXCVPLVY 1059
SK+W+P+VWA +II RARKEG I D V+T + EL+ G L+ YDT VPLVY
Sbjct: 181 RPSKHWLPIVWAASIITRARKEGRIRDDFAVKTIIDELNKFRGQCGLLISYDTISVPLVY 240
Query: 1060 TQXVTLSXVHLF 1095
TQ VTL+ F
Sbjct: 241 TQVVTLAVYSYF 252
>AE014297-1109|AAF54503.1| 721|Drosophila melanogaster CG6264-PA
protein.
Length = 721
Score = 253 bits (620), Expect = 3e-67
Identities = 119/252 (47%), Positives = 160/252 (63%), Gaps = 1/252 (0%)
Frame = +1
Query: 343 MTISYAGEVPNGSSFGCFWRILCKWRGSVYKLVWREXXXXXXXXXXXXXXXRFALTEQQQ 522
MTI+Y GEV FGCF ++L +WRGS+YKLVW + RF L Q+
Sbjct: 1 MTITYTGEVATCRGFGCFLKLLLRWRGSIYKLVWLDLLAFLTIYYAINMVYRFGLNPAQK 60
Query: 523 RVFEKVRQYFGAQSESIPMSFVLGFYVSLVVKRWWEQYKLLPWPDTLALFISAGIPGADE 702
FE + QY + E IP+SFVLGFYVS+V+ RWW QY +PWPD +A+F+S+ + G DE
Sbjct: 61 ETFEAIVQYCDSYRELIPLSFVLGFYVSIVMTRWWNQYTSIPWPDPIAVFVSSNVHGQDE 120
Query: 703 TGRLMRRNIVRYAILAYVITLQRVSLRVKRRFPTWQHVVDSGLMLESERKVFEKMDGKSP 882
GR+MRR I+RY L + L VS RVK+RFP ++V++GL+ ++E+ + E M+ P
Sbjct: 121 RGRMMRRTIMRYVCLCLTMVLANVSPRVKKRFPGLNNLVEAGLLNDNEKTIIETMNKAFP 180
Query: 883 M-SKYWMPLVWATNIINRARKEGLITSDHIVQTXLVELSDIXRXWGALMGYDTXCVPLVY 1059
SK+W+P+VWA +II RARKEG I D V+T + EL+ G L+ YDT VPLVY
Sbjct: 181 RPSKHWLPIVWAASIITRARKEGRIRDDFAVKTIIDELNKFRGQCGLLISYDTISVPLVY 240
Query: 1060 TQXVTLSXVHLF 1095
TQ VTL+ F
Sbjct: 241 TQVVTLAVYSYF 252
>BT023181-1|AAY55597.1| 535|Drosophila melanogaster IP03329p protein.
Length = 535
Score = 246 bits (602), Expect = 5e-65
Identities = 113/252 (44%), Positives = 158/252 (62%), Gaps = 1/252 (0%)
Frame = +1
Query: 343 MTISYAGEVPNGSSFGCFWRILCKWRGSVYKLVWREXXXXXXXXXXXXXXXRFALTEQQQ 522
MT+SY EV S FGCFW++L +WR S+YK++W + R+AL + +
Sbjct: 1 MTVSYTAEVATCSHFGCFWKLLMRWRASIYKIIWVDLLAFLSCFYFMAVIYRYALRDVDK 60
Query: 523 RVFEKVRQYFGAQSESIPMSFVLGFYVSLVVKRWWEQYKLLPWPDTLALFISAGIPGADE 702
VFE + Y + S IP+SFVLGFYV ++++RWW QY +PWPD LA+++SA + G DE
Sbjct: 61 PVFEDIVMYCHSYSNLIPLSFVLGFYVGIIIERWWNQYITVPWPDPLAVYVSALVRGQDE 120
Query: 703 TGRLMRRNIVRYAILAYVITLQRVSLRVKRRFPTWQHVVDSGLMLESERKVFEKMDGKSP 882
GRLMRR I+RY LA + L +S +KRRFPT+ +++ GL+ +E + + MD K P
Sbjct: 121 HGRLMRRTIMRYVCLALTMVLSMISPVIKRRFPTYDQLIEVGLLNANEANIMKAMDVKFP 180
Query: 883 M-SKYWMPLVWATNIINRARKEGLITSDHIVQTXLVELSDIXRXWGALMGYDTXCVPLVY 1059
KYWMP+VWA +I+ RARKEG I D +++ + EL+ L+ YDT VPLVY
Sbjct: 181 KHPKYWMPIVWAASIVTRARKEGRIWDDFSLKSMIDELNKFRAGCNMLIHYDTISVPLVY 240
Query: 1060 TQXVTLSXVHLF 1095
TQ VTL+ F
Sbjct: 241 TQVVTLAVYSYF 252
>BT023144-1|AAY55560.1| 535|Drosophila melanogaster IP03529p protein.
Length = 535
Score = 246 bits (602), Expect = 5e-65
Identities = 113/252 (44%), Positives = 158/252 (62%), Gaps = 1/252 (0%)
Frame = +1
Query: 343 MTISYAGEVPNGSSFGCFWRILCKWRGSVYKLVWREXXXXXXXXXXXXXXXRFALTEQQQ 522
MT+SY EV S FGCFW++L +WR S+YK++W + R+AL + +
Sbjct: 1 MTVSYTAEVATCSHFGCFWKLLMRWRASIYKIIWVDLLAFLSCFYFMAVIYRYALRDVDK 60
Query: 523 RVFEKVRQYFGAQSESIPMSFVLGFYVSLVVKRWWEQYKLLPWPDTLALFISAGIPGADE 702
VFE + Y + S IP+SFVLGFYV ++++RWW QY +PWPD LA+++SA + G DE
Sbjct: 61 PVFEDIVMYCHSYSNLIPLSFVLGFYVGIIIERWWNQYITVPWPDPLAVYVSALVRGQDE 120
Query: 703 TGRLMRRNIVRYAILAYVITLQRVSLRVKRRFPTWQHVVDSGLMLESERKVFEKMDGKSP 882
GRLMRR I+RY LA + L +S +KRRFPT+ +++ GL+ +E + + MD K P
Sbjct: 121 HGRLMRRTIMRYVCLALTMVLSMISPVIKRRFPTYDQLIEVGLLNANEANIMKAMDVKFP 180
Query: 883 M-SKYWMPLVWATNIINRARKEGLITSDHIVQTXLVELSDIXRXWGALMGYDTXCVPLVY 1059
KYWMP+VWA +I+ RARKEG I D +++ + EL+ L+ YDT VPLVY
Sbjct: 181 KHPKYWMPIVWAASIVTRARKEGRIWDDFSLKSMIDELNKFRAGCNMLIHYDTISVPLVY 240
Query: 1060 TQXVTLSXVHLF 1095
TQ VTL+ F
Sbjct: 241 TQVVTLAVYSYF 252
>AE014296-2496|AAF49648.1| 535|Drosophila melanogaster CG12327-PA
protein.
Length = 535
Score = 246 bits (602), Expect = 5e-65
Identities = 113/252 (44%), Positives = 158/252 (62%), Gaps = 1/252 (0%)
Frame = +1
Query: 343 MTISYAGEVPNGSSFGCFWRILCKWRGSVYKLVWREXXXXXXXXXXXXXXXRFALTEQQQ 522
MT+SY EV S FGCFW++L +WR S+YK++W + R+AL + +
Sbjct: 1 MTVSYTAEVATCSHFGCFWKLLMRWRASIYKIIWVDLLAFLSCFYFMAVIYRYALRDVDK 60
Query: 523 RVFEKVRQYFGAQSESIPMSFVLGFYVSLVVKRWWEQYKLLPWPDTLALFISAGIPGADE 702
VFE + Y + S IP+SFVLGFYV ++++RWW QY +PWPD LA+++SA + G DE
Sbjct: 61 PVFEDIVMYCHSYSNLIPLSFVLGFYVGIIIERWWNQYITVPWPDPLAVYVSALVRGQDE 120
Query: 703 TGRLMRRNIVRYAILAYVITLQRVSLRVKRRFPTWQHVVDSGLMLESERKVFEKMDGKSP 882
GRLMRR I+RY LA + L +S +KRRFPT+ +++ GL+ +E + + MD K P
Sbjct: 121 HGRLMRRTIMRYVCLALTMVLSMISPVIKRRFPTYDQLIEVGLLNANEANIMKAMDVKFP 180
Query: 883 M-SKYWMPLVWATNIINRARKEGLITSDHIVQTXLVELSDIXRXWGALMGYDTXCVPLVY 1059
KYWMP+VWA +I+ RARKEG I D +++ + EL+ L+ YDT VPLVY
Sbjct: 181 KHPKYWMPIVWAASIVTRARKEGRIWDDFSLKSMIDELNKFRAGCNMLIHYDTISVPLVY 240
Query: 1060 TQXVTLSXVHLF 1095
TQ VTL+ F
Sbjct: 241 TQVVTLAVYSYF 252
>AE014296-2495|AAF49649.2| 460|Drosophila melanogaster CG7259-PA
protein.
Length = 460
Score = 190 bits (462), Expect = 5e-48
Identities = 85/176 (48%), Positives = 120/176 (68%), Gaps = 1/176 (0%)
Frame = +1
Query: 571 IPMSFVLGFYVSLVVKRWWEQYKLLPWPDTLALFISAGIPGADETGRLMRRNIVRYAILA 750
IP+SFVLGF+V +V+ RWW+QY +PWPD +A+ IS I G+D+ R+MRR I+RY L
Sbjct: 11 IPLSFVLGFFVRIVMNRWWDQYTTIPWPDGIAILISTSIHGSDDRARVMRRTILRYVCLC 70
Query: 751 YVITLQRVSLRVKRRFPTWQHVVDSGLMLESERKVFEKMDGKSP-MSKYWMPLVWATNII 927
VI +S RVKRRFPT+ ++++G +LE+E+K+ E MD P K+WMP+VWA +I+
Sbjct: 71 QVIVFTMISPRVKRRFPTYTQIIEAGFLLENEKKIIEAMDQAFPSYPKHWMPIVWAASIV 130
Query: 928 NRARKEGLITSDHIVQTXLVELSDIXRXWGALMGYDTXCVPLVYTQXVTLSXVHLF 1095
RAR+E I D+ V+T + EL+ + G L+ YD VPLVYTQ VT++ F
Sbjct: 131 MRARRENKIRDDYAVKTIIDELNQLRGNCGFLLYYDWISVPLVYTQVVTVATYSFF 186
>BT025894-1|ABG02138.1| 113|Drosophila melanogaster IP02836p
protein.
Length = 113
Score = 49.6 bits (113), Expect = 9e-06
Identities = 33/93 (35%), Positives = 44/93 (47%)
Frame = -1
Query: 770 LCSVMT*ARMAYLTIFLLINRPVSSAPGMPAEMNSASVSGHGRSLYCSHQRFTTRLT*KP 591
+ + +T R YL I LI +SS P + + A SG G +Y SH RF T LT P
Sbjct: 1 MVNTITWHRHTYLRIVRLITLALSSEPWILVLIKMAIPSGQGMVVYWSHHRFITILTKNP 60
Query: 590 STNDIGIDSLCAPKYCRTFSNTLCCCSVSAKRY 492
TND G+ +Y S L S + +RY
Sbjct: 61 KTNDNGMREPFFSQYDIMASKNLLPSSFTNRRY 93
>AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC
protein.
Length = 4699
Score = 31.1 bits (67), Expect = 3.3
Identities = 12/54 (22%), Positives = 27/54 (50%)
Frame = -1
Query: 647 GRSLYCSHQRFTTRLT*KPSTNDIGIDSLCAPKYCRTFSNTLCCCSVSAKRYNK 486
G +L H++ + N+ G + +C P++ + F++ C C+ K +N+
Sbjct: 521 GANLRIFHRQKQPEVAHPCRDNNAGCNQICVPQWTKGFASAKCMCTAGYKLHNQ 574
>AY118377-1|AAM48406.1| 1265|Drosophila melanogaster RE24170p protein.
Length = 1265
Score = 29.9 bits (64), Expect = 7.6
Identities = 26/73 (35%), Positives = 36/73 (49%)
Frame = +1
Query: 766 QRVSLRVKRRFPTWQHVVDSGLMLESERKVFEKMDGKSPMSKYWMPLVWATNIINRARKE 945
Q+V L +KRR P+ QHV+ SGL S+ KV E M G + MP + + A
Sbjct: 825 QQVKL-IKRRLPSDQHVIKSGL---SQHKV-EAMRGLAQNISRIMPAMHQATKQSLAAIV 879
Query: 946 GLITSDHIVQTXL 984
I SD+ + L
Sbjct: 880 STIESDNAAEHTL 892
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,362,431
Number of Sequences: 53049
Number of extensions: 1009032
Number of successful extensions: 2668
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2655
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6682378440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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