Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_E16
         (1771 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5BXW2 Cluster: SJCHGC01957 protein; n=3; Eukaryota|Rep...    27   3.2  
UniRef50_A6G312 Cluster: Serine/threonine protein kinase; n=1; P...    36   3.4  
UniRef50_Q5CU66 Cluster: Putative uncharacterized protein; n=2; ...    36   3.4  

>UniRef50_Q5BXW2 Cluster: SJCHGC01957 protein; n=3; Eukaryota|Rep:
            SJCHGC01957 protein - Schistosoma japonicum (Blood fluke)
          Length = 180

 Score = 27.5 bits (58), Expect(2) = 3.2
 Identities = 12/21 (57%), Positives = 12/21 (57%)
 Frame = -2

Query: 1128 PXXFFFFFXFXKKKXFFXFFF 1066
            P  FFFFF F     FF FFF
Sbjct: 1    PFCFFFFFFFFFFFFFFFFFF 21



 Score = 27.5 bits (58), Expect(2) = 3.2
 Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 3/25 (12%)
 Frame = -2

Query: 951 FXXXXXGXPP---PPKKKXXXPPPG 886
           F     G PP   PPKKK   PPPG
Sbjct: 41  FLGGGGGGPPFFAPPKKKGGGPPPG 65


>UniRef50_A6G312 Cluster: Serine/threonine protein kinase; n=1;
           Plesiocystis pacifica SIR-1|Rep: Serine/threonine
           protein kinase - Plesiocystis pacifica SIR-1
          Length = 424

 Score = 35.9 bits (79), Expect = 3.4
 Identities = 16/30 (53%), Positives = 17/30 (56%)
 Frame = -1

Query: 484 PPXGKKXPXXXPXPQNPPPXXGPP*NPGXK 395
           PP GKK P   P  + PPP  GPP  PG K
Sbjct: 344 PPGGKKKPPPPPGKRPPPPSGGPP-PPGGK 372


>UniRef50_Q5CU66 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium parvum Iowa II
          Length = 218

 Score = 35.9 bits (79), Expect = 3.4
 Identities = 21/64 (32%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
 Frame = -1

Query: 484 PPXGKKXPXXXPXPQNPPPXXGPP*NPGXKXXVPXKGXXXGXXENFPRKF-VPLXKXXXX 308
           PP G   P   P P  PPP  GPP  P      P      G   N+P +   P+      
Sbjct: 87  PPVGPPPPVGPPPPVGPPPPVGPP--PPVGPPPPQMFNQMGHPVNYPPQIQQPVFTNAPP 144

Query: 307 FXPP 296
           F PP
Sbjct: 145 FAPP 148


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,796,751
Number of Sequences: 1657284
Number of extensions: 7785519
Number of successful extensions: 67626
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51024
length of database: 575,637,011
effective HSP length: 105
effective length of database: 401,622,191
effective search space used: 194385140444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)