Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_E12
         (1248 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1170 + 34663853-34663928,34664038-34664078,34664317-346643...   152   5e-37
03_02_0352 + 7749902-7751788,7752547-7752615                           31   1.9  

>02_05_1170 +
           34663853-34663928,34664038-34664078,34664317-34664386,
           34664499-34664647,34664784-34664879,34665406-34665476,
           34665637-34665698,34665778-34665841,34665950-34666034,
           34666129-34666255,34666381-34666454,34666539-34666599,
           34666683-34666771,34666897-34667206,34667763-34667815,
           34668299-34668370,34668648-34668914,34669015-34669047,
           34669163-34669245,34669522-34669594,34669834-34670170,
           34670302-34670633,34670816-34671135,34671261-34671612,
           34671691-34671906
          Length = 1170

 Score =  152 bits (369), Expect = 5e-37
 Identities = 85/169 (50%), Positives = 107/169 (63%), Gaps = 1/169 (0%)
 Frame = +3

Query: 393 IVALANLQPLHKVGHHGIELYAEAMGLPLYREIITGTAVDQGKNXKPTDNDEVEDLYRLL 572
           IVALANL P             + M       +I     +QG     T  DEVED++ LL
Sbjct: 477 IVALANLIPEDDAVDELDSYMYQTMKFDAI-SLIGLACREQGLKYNVTTGDEVEDMFALL 535

Query: 573 SKVKEEI-NIEAVAVGAILSDYQRIRVENVCQRLGLVSLAYLWRRNQKELLQEMIYCGID 749
           S+VK +I +I AV+ GAI SDYQR+RVE+VC RLGLVSLAYLW+++Q  LL EMI  GI 
Sbjct: 536 SEVKRQIPSITAVSSGAIASDYQRLRVESVCSRLGLVSLAYLWKQDQTLLLDEMIRRGIV 595

Query: 750 AIIIKVAAMGLDPRIHLGMTIRDIQPHLLVMKEKYGLNMCGXGGRVXNL 896
           AII+KVAAMGL P  HLG  + +++ HLL + E YG+N+CG GG    L
Sbjct: 596 AIIVKVAAMGLKPSAHLGKELAELKCHLLQLNESYGINVCGEGGEYETL 644



 Score = 29.5 bits (63), Expect = 5.8
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 871 GXGGEYXTFTLXCPLXXKKLII 936
           G GGEY T TL CPL     I+
Sbjct: 636 GEGGEYETLTLDCPLFRNARIV 657


>03_02_0352 + 7749902-7751788,7752547-7752615
          Length = 651

 Score = 31.1 bits (67), Expect = 1.9
 Identities = 15/53 (28%), Positives = 28/53 (52%)
 Frame = -3

Query: 883 LPPSPHMLSPYFSFMTSKCGWMSRIVIPKCILGSRPIAATFIMIASIPQYIIS 725
           + P+PH+ S +++F        S  ++ +C+L  RP AA  +  A+ P  + S
Sbjct: 78  IDPAPHISSQFYTFTAE-----SHALMLRCVLAGRPAAADEVRSATPPSVLAS 125


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,377,831
Number of Sequences: 37544
Number of extensions: 430986
Number of successful extensions: 925
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 924
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3852724812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)