Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_E11
         (1176 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0867 - 6600847-6601413,6601954-6602181                           30   4.1  
11_04_0147 - 14095039-14095937,14096914-14097379                       29   5.4  
02_05_0734 + 31318380-31318610,31319422-31319988                       29   5.4  
07_03_1180 - 24601631-24602142,24602518-24602581,24602811-246028...    29   7.1  
04_01_0285 - 3794628-3794801,3794935-3795090,3795232-3795729           29   7.1  
01_01_0272 - 2249662-2249721,2250110-2250335,2250419-2250615,225...    29   7.1  
05_07_0310 + 29135875-29136052,29136206-29136617,29136723-291368...    29   9.4  

>06_01_0867 - 6600847-6601413,6601954-6602181
          Length = 264

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = -3

Query: 439 HCPHWCPCEILDYEFQNVHD*K*SPYHDYCGSCYSNEHIFRQAF 308
           HC  W P  IL   F N      S YHD     Y N++ F Q F
Sbjct: 186 HCGLWLPGNILHVFFSNN-----SAYHDIHHQLYGNKYNFSQPF 224


>11_04_0147 - 14095039-14095937,14096914-14097379
          Length = 454

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +1

Query: 421 GTNVDSDSLSKVLRGLGFSVTVLH-NLRAED 510
           G  +    L+ VLR  GFS+TVLH  LRA D
Sbjct: 17  GHTIPMFHLAAVLRSRGFSITVLHTELRAPD 47


>02_05_0734 + 31318380-31318610,31319422-31319988
          Length = 265

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 17/44 (38%), Positives = 19/44 (43%)
 Frame = -3

Query: 439 HCPHWCPCEILDYEFQNVHD*K*SPYHDYCGSCYSNEHIFRQAF 308
           HC  W P  IL   F N      S YHD     Y N++ F Q F
Sbjct: 187 HCGLWLPGNILHALFNNN-----SAYHDIHHQLYGNKYNFSQPF 225


>07_03_1180 -
           24601631-24602142,24602518-24602581,24602811-24602876,
           24602949-24603070,24603170-24603344,24603466-24603701,
           24603781-24604129,24605009-24605146,24605242-24605289
          Length = 569

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
 Frame = +1

Query: 205 KKNNGSGTEQRKNGNEDEGDAWGSHG---SSQGRRYAKMPVERYAHYYNMNHNNRG 363
           +  NG G  Q  NG    GD +  +G   +  G RY +   E Y +     H   G
Sbjct: 475 QNGNGGGYHQNGNGYHQNGDGYHQNGNRYNQNGNRYHQNGDEYYQNGNGNGHRQNG 530


>04_01_0285 - 3794628-3794801,3794935-3795090,3795232-3795729
          Length = 275

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -1

Query: 906 VSQFFTKRLHKPRATSCVSPRVITWYR*EHNQKVSMNWDSVG 781
           VS   T    +P++ SC +PR + W       +    W SVG
Sbjct: 210 VSWTMTGSKARPKSDSCAAPREVEWGTGNEGDQRGSKWRSVG 251


>01_01_0272 -
           2249662-2249721,2250110-2250335,2250419-2250615,
           2250707-2250955,2251047-2251176,2251473-2251564,
           2251735-2251855,2251940-2252028,2252149-2252271,
           2252379-2252506,2253039-2253147,2253701-2254000
          Length = 607

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = +1

Query: 217 GSGTEQRKNGNEDEGDAWGSHGSSQGRRYAKMPVERYAH 333
           GSG+ ++ NG  +      S GS  G++  K    R+ H
Sbjct: 541 GSGSRKKSNGKHENSSDDDSDGSCDGKKKKKAKKTRFTH 579


>05_07_0310 +
           29135875-29136052,29136206-29136617,29136723-29136867,
           29137944-29138102,29138183-29138242,29138349-29138546
          Length = 383

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +1

Query: 187 KMADEEKKNNGSGTEQRKNGNEDEGDAWGSHGSSQGRRYAKMPV 318
           K A+ E+  N      R  G  D G  +G +  + GRR A  PV
Sbjct: 327 KPAEGERYYNPGRGRGRGRGRGDRGGFYGGYNGNGGRRQAAAPV 370


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,873,987
Number of Sequences: 37544
Number of extensions: 545967
Number of successful extensions: 1284
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1282
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3596576368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)