Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_E09
(1186 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation fa... 175 4e-44
AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation fa... 172 5e-43
AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation fa... 171 8e-43
U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation fact... 137 2e-32
Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical pr... 136 3e-32
AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical... 133 3e-31
AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical... 133 3e-31
AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation i... 133 3e-31
U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation fact... 93 3e-19
AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation i... 93 3e-19
AL132876-5|CAC48119.1| 576|Caenorhabditis elegans Hypothetical ... 29 4.9
Z81461-4|CAB62798.1| 256|Caenorhabditis elegans Hypothetical pr... 29 6.4
AF003150-1|AAB54215.1| 997|Caenorhabditis elegans Hypothetical ... 29 8.5
>AF068714-2|AAC17807.1| 248|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform a protein.
Length = 248
Score = 175 bits (427), Expect = 4e-44
Identities = 79/174 (45%), Positives = 116/174 (66%), Gaps = 3/174 (1%)
Frame = +3
Query: 186 LQNQWSLWFYANXRNKTWXEHLIELTXFDTVEAFWXLYHHIKLPSELRQGHDYAVFKQGI 365
LQN+W+LW+ RNK W + L ++ FDTVE FW LY+HI+ L G DY +FK+GI
Sbjct: 34 LQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGGLNWGSDYYLFKEGI 93
Query: 366 RPMWEXDANKXGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNVRP 542
+PMWE N GGRWL+ ++K++R LD +WL++++ ++GE F E D ICGAVVNVR
Sbjct: 94 KPMWEDVNNVQGGRWLVVVDKQRRTQLLDHYWLELLMAIVGEQFDEYGDYICGAVVNVRQ 153
Query: 543 KVDKIAIWTADAMKQHATIEIGKKLKEQLGIHGK--IGFQVHRDTMVKHSSATK 698
K DK+++WT DA + + IG+ LK++L I + ++VH+D+ + SS K
Sbjct: 154 KGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDSSARTSSTVK 207
>AF068714-3|AAM22022.1| 250|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform c protein.
Length = 250
Score = 172 bits (418), Expect = 5e-43
Identities = 81/176 (46%), Positives = 117/176 (66%), Gaps = 5/176 (2%)
Frame = +3
Query: 186 LQNQWSLWFYANXRNKTWXEHLIELTXFDTVEAFWXLYHHIKLPSELRQGHDYAVFKQGI 365
LQN+W+LW+ RNK W + L ++ FDTVE FW LY+HI+ L G DY +FK+GI
Sbjct: 34 LQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGGLNWGSDYYLFKEGI 93
Query: 366 RPMWEXDANKXGGRWLISLEKK-QRFTD-LDRFWLDVVLLLIGENF-ENSDEICGAVVNV 536
+PMWE N GGRWL+ ++K+ QR T LD +WL++++ ++GE F E D ICGAVVNV
Sbjct: 94 KPMWEDVNNVQGGRWLVVVDKQLQRRTQLLDHYWLELLMAIVGEQFDEYGDYICGAVVNV 153
Query: 537 RPKVDKIAIWTADAMKQHATIEIGKKLKEQLGIHGK--IGFQVHRDTMVKHSSATK 698
R K DK+++WT DA + + IG+ LK++L I + ++VH+D+ + SS K
Sbjct: 154 RQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDSSARTSSTVK 209
>AF068714-4|AAK68676.1| 251|Caenorhabditis elegans Initiation
factor 4e (eif4e) familyprotein 3, isoform b protein.
Length = 251
Score = 171 bits (416), Expect = 8e-43
Identities = 81/177 (45%), Positives = 117/177 (66%), Gaps = 6/177 (3%)
Frame = +3
Query: 186 LQNQWSLWFYANXRNKTWXEHLIELTXFDTVEAFWXLYHHIKLPSELRQGHDYAVFKQGI 365
LQN+W+LW+ RNK W + L ++ FDTVE FW LY+HI+ L G DY +FK+GI
Sbjct: 34 LQNRWALWYLKADRNKEWEDCLKMVSLFDTVEDFWSLYNHIQSAGGLNWGSDYYLFKEGI 93
Query: 366 RPMWEXDANKXGGRWLISLEKK--QRFTD-LDRFWLDVVLLLIGENF-ENSDEICGAVVN 533
+PMWE N GGRWL+ ++K+ QR T LD +WL++++ ++GE F E D ICGAVVN
Sbjct: 94 KPMWEDVNNVQGGRWLVVVDKQKLQRRTQLLDHYWLELLMAIVGEQFDEYGDYICGAVVN 153
Query: 534 VRPKVDKIAIWTADAMKQHATIEIGKKLKEQLGIHGK--IGFQVHRDTMVKHSSATK 698
VR K DK+++WT DA + + IG+ LK++L I + ++VH+D+ + SS K
Sbjct: 154 VRQKGDKVSLWTRDATRDDVNLRIGQVLKQKLSIPDTEILRYEVHKDSSARTSSTVK 210
>U41550-3|AAA83286.1| 228|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 2 protein.
Length = 228
Score = 137 bits (331), Expect = 2e-32
Identities = 61/150 (40%), Positives = 91/150 (60%), Gaps = 1/150 (0%)
Frame = +3
Query: 183 RLQNQWSLWFYANXRNKTWXEHLIELTXFDTVEAFWXLYHHIKLPSELRQGHDYAVFKQG 362
+L+ W+ W+ + RNK+W E L + F +V FW L+ IK PS L DY VF+ G
Sbjct: 18 KLKRNWTWWYLNDERNKSWEERLKNVKTFSSVGEFWALHDSIKPPSGLNPPSDYNVFRDG 77
Query: 363 IRPMWEXDANKXGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNVR 539
I PMWE N+ GGRWLI++EK + +D W ++++ +IGE F ++ + +CG V NVR
Sbjct: 78 IEPMWEVPQNQNGGRWLITIEKGRTPEIMDTIWTEILMAMIGEQFSDDIESLCGIVCNVR 137
Query: 540 PKVDKIAIWTADAMKQHATIEIGKKLKEQL 629
K KI++WT ++ A + IG LK+ L
Sbjct: 138 GKGSKISVWTTNSADDGANLRIGGVLKQVL 167
>Z81546-5|CAB04454.2| 212|Caenorhabditis elegans Hypothetical
protein F53A2.6 protein.
Length = 212
Score = 136 bits (329), Expect = 3e-32
Identities = 62/149 (41%), Positives = 90/149 (60%), Gaps = 1/149 (0%)
Frame = +3
Query: 186 LQNQWSLWFYANXRNKTWXEHLIELTXFDTVEAFWXLYHHIKLPSELRQGHDYAVFKQGI 365
L+ W+ W+ + RNK+W + L ++ F+TV FW LY I+ PS L DY VF+ I
Sbjct: 14 LKRNWTWWYLNDERNKSWEDRLKKVYTFNTVSEFWALYDAIRPPSGLNALCDYNVFRDDI 73
Query: 366 RPMWEXDANKXGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNVRP 542
+PMWE N GGRWLI ++K + +D WL++++ L+GE F ++ + ICG V NVR
Sbjct: 74 QPMWEVPENSNGGRWLIVIDKGKTPEMVDAIWLEILMALVGEQFGKDMESICGLVCNVRG 133
Query: 543 KVDKIAIWTADAMKQHATIEIGKKLKEQL 629
K KI++WT D + IG LKE+L
Sbjct: 134 KGSKISVWTKDCNDDETNMRIGVVLKEKL 162
>AL117195-24|CAB55035.1| 201|Caenorhabditis elegans Hypothetical
protein Y57A10A.30b protein.
Length = 201
Score = 133 bits (321), Expect = 3e-31
Identities = 73/187 (39%), Positives = 102/187 (54%), Gaps = 11/187 (5%)
Frame = +3
Query: 186 LQNQWSLWFYANXRNKTWXEHLIELTXFDTVEAFWXLYHHIKLPSELRQGHDYAVFKQGI 365
LQ WS WF + RN +W + L ++ F+TV FW Y I PS L DY VF+ I
Sbjct: 11 LQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRDDI 70
Query: 366 RPMWEXDANKXGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNVRP 542
+P WE N GGRWLI + K + LD WL+++L LIGE F ++ + ICG V NVR
Sbjct: 71 QPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNVRG 130
Query: 543 KVDKIAIWTADAMKQHATIEIGKKLKEQL-----GIHGK-----IGFQVHRDTMVKHSSA 692
+ KI++WT + + IG LKE+L H K I +Q HR+ + K +SA
Sbjct: 131 QGSKISVWTKNCNDDDTNMRIGVVLKEKLMAAASKAHSKPLFDVIHYQTHRNCVKKTTSA 190
Query: 693 TKNLYTV 713
K +++
Sbjct: 191 LKYKFSL 197
>AL117195-23|CAB60769.1| 240|Caenorhabditis elegans Hypothetical
protein Y57A10A.30a protein.
Length = 240
Score = 133 bits (321), Expect = 3e-31
Identities = 73/187 (39%), Positives = 102/187 (54%), Gaps = 11/187 (5%)
Frame = +3
Query: 186 LQNQWSLWFYANXRNKTWXEHLIELTXFDTVEAFWXLYHHIKLPSELRQGHDYAVFKQGI 365
LQ WS WF + RN +W + L ++ F+TV FW Y I PS L DY VF+ I
Sbjct: 50 LQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRDDI 109
Query: 366 RPMWEXDANKXGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNVRP 542
+P WE N GGRWLI + K + LD WL+++L LIGE F ++ + ICG V NVR
Sbjct: 110 QPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNVRG 169
Query: 543 KVDKIAIWTADAMKQHATIEIGKKLKEQL-----GIHGK-----IGFQVHRDTMVKHSSA 692
+ KI++WT + + IG LKE+L H K I +Q HR+ + K +SA
Sbjct: 170 QGSKISVWTKNCNDDDTNMRIGVVLKEKLMAAASKAHSKPLFDVIHYQTHRNCVKKTTSA 229
Query: 693 TKNLYTV 713
K +++
Sbjct: 230 LKYKFSL 236
>AF214652-1|AAF62415.1| 201|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 5 protein.
Length = 201
Score = 133 bits (321), Expect = 3e-31
Identities = 73/187 (39%), Positives = 102/187 (54%), Gaps = 11/187 (5%)
Frame = +3
Query: 186 LQNQWSLWFYANXRNKTWXEHLIELTXFDTVEAFWXLYHHIKLPSELRQGHDYAVFKQGI 365
LQ WS WF + RN +W + L ++ F+TV FW Y I PS L DY VF+ I
Sbjct: 11 LQRNWSWWFLNDDRNASWQDRLKKVYTFNTVPEFWAFYEAILPPSGLNDLCDYNVFRDDI 70
Query: 366 RPMWEXDANKXGGRWLISLEKKQRFTDLDRFWLDVVLLLIGENF-ENSDEICGAVVNVRP 542
+P WE N GGRWLI + K + LD WL+++L LIGE F ++ + ICG V NVR
Sbjct: 71 QPKWEAPENWDGGRWLIIINKGKTPEVLDAVWLEILLALIGEQFGKDMESICGLVCNVRG 130
Query: 543 KVDKIAIWTADAMKQHATIEIGKKLKEQL-----GIHGK-----IGFQVHRDTMVKHSSA 692
+ KI++WT + + IG LKE+L H K I +Q HR+ + K +SA
Sbjct: 131 QGSKISVWTKNCNDDDTNMRIGVVLKEKLMAAASKAHSKPLFDVIHYQTHRNCVKKTTSA 190
Query: 693 TKNLYTV 713
K +++
Sbjct: 191 LKYKFSL 197
>U64605-1|AAF98601.1| 212|Caenorhabditis elegans Initiation factor
4e (eif4e) familyprotein 4 protein.
Length = 212
Score = 93.5 bits (222), Expect = 3e-19
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 5/149 (3%)
Frame = +3
Query: 273 TVEAFWXLYHHIKLPSELRQGHDYAVFKQGIRPMWEXDANKXGGRWLISLEKKQRFTDLD 452
+VE FW + H K P+E+ D FK G++P+WE AN GG+W+I L+K
Sbjct: 66 SVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLS----T 121
Query: 453 RFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKE--Q 626
R W ++++ +IGE F DE+CGAV ++R + D I++W +A T I + L+ Q
Sbjct: 122 RIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQ 181
Query: 627 LGIHGKIGFQVHRDTMVKHSS---ATKNL 704
L + + ++ H D + SS TKN+
Sbjct: 182 LPQNTVLEYKRHDDCLRDQSSYRHTTKNI 210
>AF214651-1|AAF62414.1| 212|Caenorhabditis elegans translation
initiation factor eIF4Eisoform 4 protein.
Length = 212
Score = 93.5 bits (222), Expect = 3e-19
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 5/149 (3%)
Frame = +3
Query: 273 TVEAFWXLYHHIKLPSELRQGHDYAVFKQGIRPMWEXDANKXGGRWLISLEKKQRFTDLD 452
+VE FW + H K P+E+ D FK G++P+WE AN GG+W+I L+K
Sbjct: 66 SVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLS----T 121
Query: 453 RFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHATIEIGKKLKE--Q 626
R W ++++ +IGE F DE+CGAV ++R + D I++W +A T I + L+ Q
Sbjct: 122 RIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQ 181
Query: 627 LGIHGKIGFQVHRDTMVKHSS---ATKNL 704
L + + ++ H D + SS TKN+
Sbjct: 182 LPQNTVLEYKRHDDCLRDQSSYRHTTKNI 210
>AL132876-5|CAC48119.1| 576|Caenorhabditis elegans Hypothetical
protein Y105E8A.5 protein.
Length = 576
Score = 29.5 bits (63), Expect = 4.9
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 735 KICNAKTKQCIDSWSQNYA*PLCLCVLGNQSCRVSLAVLSVFS 607
KI N+ T CI +++ A PL + V+G + C + L F+
Sbjct: 180 KIANSATITCIAKLTKSTAEPLDILVIGTEHCEIFLIDSQAFT 222
>Z81461-4|CAB62798.1| 256|Caenorhabditis elegans Hypothetical
protein C04F12.6 protein.
Length = 256
Score = 29.1 bits (62), Expect = 6.4
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 64 RSPLKSXAGXPPAXVXGSPPTXTQPXSXAXVPPVIFXQAPXYKT 195
R+P + + P A G+ P P + A PP+ P Y+T
Sbjct: 61 RTPSAAGSAAPTAPAEGAAPAAGAPAAVAPKPPMAATHDPNYQT 104
>AF003150-1|AAB54215.1| 997|Caenorhabditis elegans Hypothetical
protein T05E7.3 protein.
Length = 997
Score = 28.7 bits (61), Expect = 8.5
Identities = 26/93 (27%), Positives = 40/93 (43%)
Frame = +3
Query: 414 ISLEKKQRFTDLDRFWLDVVLLLIGENFENSDEICGAVVNVRPKVDKIAIWTADAMKQHA 593
I+ K RF++ W DV + +F+ D I K+ I T+ ++ H
Sbjct: 736 ITNPKASRFSESSLSWKDVKMSKTVLSFDVFDRI--------EKIVPFHILTS--IETHI 785
Query: 594 TIEIGKKLKEQLGIHGKIGFQVHRDTMVKHSSA 692
T+E+ K L E + KIG + V H SA
Sbjct: 786 TVELEKMLIEYISNARKIGVSFNLQNSVTHESA 818
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,252,041
Number of Sequences: 27780
Number of extensions: 370343
Number of successful extensions: 781
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3245116438
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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