Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_E08
         (1220 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical pr...    30   3.8  
AF016446-2|AAC24165.1|   70|Caenorhabditis elegans Hypothetical ...    30   3.8  
U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin cyt...    29   5.0  
Z95621-2|CAB09131.1|  330|Caenorhabditis elegans Hypothetical pr...    29   6.7  
Z78019-9|CAB01457.1|  330|Caenorhabditis elegans Hypothetical pr...    29   6.7  

>Z81053-1|CAB02877.1|  385|Caenorhabditis elegans Hypothetical
           protein E02A10.2 protein.
          Length = 385

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 16/42 (38%), Positives = 16/42 (38%)
 Frame = +3

Query: 177 GSGGGCGAKRRAGSPCEGGGKVARWEDSIARLEAVAAGAGGG 302
           G GGGCG     G  C GGG             A   G GGG
Sbjct: 27  GGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGG 68


>AF016446-2|AAC24165.1|   70|Caenorhabditis elegans Hypothetical
           protein C02E7.6 protein.
          Length = 70

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 17/41 (41%), Positives = 18/41 (43%)
 Frame = +3

Query: 177 GSGGGCGAKRRAGSPCEGGGKVARWEDSIARLEAVAAGAGG 299
           G GGGCG        C  GG  A     +A   A AA AGG
Sbjct: 22  GGGGGCGCAPPPPPACGCGGGAAPPPAYVAPAPAYAAPAGG 62


>U58751-5|AAN84882.1|  781|Caenorhabditis elegans Wasp (actin
           cytoskeleton modulator)homolog protein 1, isoform b
           protein.
          Length = 781

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = +3

Query: 648 EPVGCAGGNVSRCELLSARDPAAGRATPFPAPAAP 752
           EP+ C+GG+ S  E  SA   +    TP P P+ P
Sbjct: 300 EPIYCSGGSDSSTESSSATPSSVEADTPPPIPSHP 334


>Z95621-2|CAB09131.1|  330|Caenorhabditis elegans Hypothetical
           protein ZK863.2 protein.
          Length = 330

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +3

Query: 177 GSGGGCGAKRRAGSPCEGG--GKVARWEDSIARLEAVAAGAGGGD 305
           G+ G  GA  + G P + G  G  A +     R  A+A G GGGD
Sbjct: 208 GNPGSAGADGQPGGPGQDGAPGSDAAYCPCPPRSGAIAGGGGGGD 252


>Z78019-9|CAB01457.1|  330|Caenorhabditis elegans Hypothetical
           protein ZK863.2 protein.
          Length = 330

 Score = 29.1 bits (62), Expect = 6.7
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +3

Query: 177 GSGGGCGAKRRAGSPCEGG--GKVARWEDSIARLEAVAAGAGGGD 305
           G+ G  GA  + G P + G  G  A +     R  A+A G GGGD
Sbjct: 208 GNPGSAGADGQPGGPGQDGAPGSDAAYCPCPPRSGAIAGGGGGGD 252


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,378,637
Number of Sequences: 27780
Number of extensions: 298535
Number of successful extensions: 1329
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3370329934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)