Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_E07
         (1176 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0252 + 2060214-2060587,2060710-2061166                           33   0.33 
08_01_0251 - 2057136-2057589,2057962-2058332                           33   0.58 
12_02_0785 + 23135764-23135973,23136061-23136713,23136822-231369...    31   2.3  
11_01_0090 + 679162-679472,679579-679588                               30   4.1  
09_02_0531 + 10312743-10313293,10314313-10315030                       30   4.1  
05_03_0428 + 13899295-13899669                                         30   4.1  
03_02_0780 - 11131064-11131276,11131444-11131516,11134152-11134513     30   4.1  
10_01_0019 - 228990-229009,229513-229814,229830-230440                 29   5.4  
04_03_0570 - 17242362-17242694,17242714-17242758                       29   5.4  
02_04_0413 + 22681957-22682035,22682253-22682788                       29   7.1  
05_06_0026 - 25024807-25025300,25025432-25025495,25025567-250256...    29   9.4  

>08_01_0252 + 2060214-2060587,2060710-2061166
          Length = 276

 Score = 33.5 bits (73), Expect = 0.33
 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
 Frame = +3

Query: 885  QCIR-LAPVACASCVTKTPDEICKKCDTAKALAMENSKTKCNXNNXGSYAPKNRDERGEV 1061
            QC R LAP ACA C++ T  +  K C  A+   ++ S           Y P   + R  +
Sbjct: 206  QCTRDLAPPACAQCLSSTVSKFDKACGAAQGCQIDYSSCWARYEIYPFYFPLEANGRATI 265

Query: 1062 KTMPY 1076
                Y
Sbjct: 266  DMNKY 270


>08_01_0251 - 2057136-2057589,2057962-2058332
          Length = 274

 Score = 32.7 bits (71), Expect = 0.58
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
 Frame = +3

Query: 885  QCIR-LAPVACASCVTKTPDEICKKCDTAKALAMENSKTKCNXNNXGSYAPKNRDERGEV 1061
            QC R LAP ACA C+++   +  K C++A+   ++ S           Y P     R  +
Sbjct: 204  QCTRDLAPPACARCLSEIVSKFDKTCNSAQGCQIDYSSCWARYEIYPFYFPLEAGSRATI 263

Query: 1062 KTMPY 1076
                Y
Sbjct: 264  DMSKY 268


>12_02_0785 +
           23135764-23135973,23136061-23136713,23136822-23136903,
           23137031-23137113,23137229-23137361,23137493-23137664,
           23137929-23138656
          Length = 686

 Score = 30.7 bits (66), Expect = 2.3
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +3

Query: 831 LPSTSTDKKDCSCKLTHCQCIRLAPVACASCVTKTPDEICKKC 959
           L  +S D     C+ +HC   R+  + C++C   T D +C+ C
Sbjct: 359 LCGSSFDDYSPRCRCSHC---RMLVLVCSTCQDSTKDYVCELC 398


>11_01_0090 + 679162-679472,679579-679588
          Length = 106

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
 Frame = +3

Query: 723 ALAQKDPSHSCASTEEQTKCVGCSQPSCLYG---QCDGHLPSTSTDKKDCS 866
           A    D   +CA  ++QT  +G  +P  + G   +CD ++P   +   DCS
Sbjct: 53  AATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCDVNIPYAISPSTDCS 103


>09_02_0531 + 10312743-10313293,10314313-10315030
          Length = 422

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 12/38 (31%), Positives = 23/38 (60%)
 Frame = +3

Query: 633 FVCSRYGRPKRDISTIIHILNDLLCATPPIALAQKDPS 746
           FV +R    + D+ +   +L +++CA PP+ L + +PS
Sbjct: 258 FVNTRRPSTESDVYSFGVVLLEIVCAKPPVVLQENEPS 295


>05_03_0428 + 13899295-13899669
          Length = 124

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 16/71 (22%), Positives = 27/71 (38%)
 Frame = +3

Query: 726 LAQKDPSHSCASTEEQTKCVGCSQPSCLYGQCDGHLPSTSTDKKDCSCKLTHCQCIRLAP 905
           L ++D         + T+ VGC      Y    G   ++   ++  +C  +   C   AP
Sbjct: 39  LCKRDRITRAMEMFDTTRAVGCEPTIRTYNSLIGGSATSGGSRRHWTCSTSSRSCRSPAP 98

Query: 906 VACASCVTKTP 938
           V C    T+ P
Sbjct: 99  VCCCRHQTRPP 109


>03_02_0780 - 11131064-11131276,11131444-11131516,11134152-11134513
          Length = 215

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 18/64 (28%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
 Frame = +3

Query: 888  CIR-LAPVACASCVTKTPDEICKKCDTAKALAMENSKTKCNXNNXGSYAPKNRDERGEVK 1064
            C R LAP+ACA C++    +    C+ A+   +E S           Y P   D R    
Sbjct: 146  CTRDLAPLACAQCLSTAVSDFGDICNAAEGCQIEYSTCWVRYEIYPFYFPLKTDGRATTD 205

Query: 1065 TMPY 1076
               Y
Sbjct: 206  MTKY 209


>10_01_0019 - 228990-229009,229513-229814,229830-230440
          Length = 310

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +3

Query: 708 ATPPIALAQKDPSHSCASTEEQTKCVGCSQPSCLYGQC 821
           A PP+AL +K P+ S A   + ++CV  +     + +C
Sbjct: 246 ACPPLALGKKPPAGSYACVSDNSECVNSTNGPGYFCRC 283


>04_03_0570 - 17242362-17242694,17242714-17242758
          Length = 125

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 4/44 (9%)
 Frame = +3

Query: 756 ASTEEQTKCVGCSQ--PSCLYGQCDG--HLPSTSTDKKDCSCKL 875
           A T   T+C G S+  P  + G+  G  H+ S S+DK+DC  ++
Sbjct: 2   AKTATTTQCAGSSKAMPRLVSGRSGGGRHMGSGSSDKEDCGQRI 45


>02_04_0413 + 22681957-22682035,22682253-22682788
          Length = 204

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 21/64 (32%), Positives = 23/64 (35%), Gaps = 2/64 (3%)
 Frame = +3

Query: 705 CATPPIALAQKDPS-HS-CASTEEQTKCVGCSQPSCLYGQCDGHLPSTSTDKKDCSCKLT 878
           C  PP       P  H  C  +     C GCS   C  GQC    PS S +     CK  
Sbjct: 89  CPRPPHPPPSPSPCVHPPCCESAAGCCCNGCSGGGCGGGQCP---PSPSCENHHPPCKPG 145

Query: 879 HCQC 890
            C C
Sbjct: 146 CCCC 149


>05_06_0026 -
           25024807-25025300,25025432-25025495,25025567-25025662,
           25025719-25025929,25026616-25026690,25026820-25027037
          Length = 385

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +3

Query: 729 AQKDPSHSCASTEEQTKCVGCSQPSCLYGQCDGHLPSTSTDKKDCSCK 872
           A +D  HS +ST  +  C  C + SCL   CD +   T      C C+
Sbjct: 167 ATEDAHHSSSSTPPRRGC-NCKKSSCLKKYCDCYQDGTGC-SLFCRCE 212


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,395,648
Number of Sequences: 37544
Number of extensions: 515387
Number of successful extensions: 1149
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3596576368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)