Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_E07
(1176 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC094778-1|AAH94778.1| 468|Homo sapiens midnolin protein. 37 0.12
BC015089-1|AAH15089.2| 174|Homo sapiens MIDN protein protein. 37 0.12
U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating... 33 1.5
AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein. 33 1.5
AK131434-1|BAD18580.1| 933|Homo sapiens protein ( Homo sapiens ... 33 1.5
BC126370-1|AAI26371.1| 362|Homo sapiens TMEM129 protein protein. 33 2.0
AJ628245-1|CAF31637.1| 177|Homo sapiens keratin associated prot... 33 2.6
AF348997-1|AAO32957.1| 61|Homo sapiens MTE protein. 33 2.6
AB126080-1|BAD20207.1| 156|Homo sapiens keratin associated prot... 33 2.6
AB126071-1|BAD20198.1| 177|Homo sapiens keratin associated prot... 33 2.6
X55077-1|CAA38905.1| 591|Homo sapiens alpha-2 macroglobulin rec... 32 4.6
X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related prec... 32 4.6
DQ314873-1|ABC40732.1| 4544|Homo sapiens low density lipoprotein... 32 4.6
AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein receptor-re... 32 4.6
AB209498-1|BAD92735.1| 2359|Homo sapiens low density lipoprotein... 32 4.6
M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein. 31 6.1
J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein. 31 6.1
AL450304-5|CAI14877.1| 1609|Homo sapiens laminin, gamma 1 (forme... 31 6.1
AL354953-3|CAH70981.1| 1609|Homo sapiens laminin, gamma 1 (forme... 31 6.1
BC112345-1|AAI12346.1| 955|Homo sapiens chordin, isoform a prot... 31 8.1
BC029879-1|AAH29879.1| 413|Homo sapiens Unknown (protein for IM... 31 8.1
AY358926-1|AAQ89285.1| 954|Homo sapiens chordin protein. 31 8.1
AF209928-1|AAG35767.1| 955|Homo sapiens chordin protein. 31 8.1
AF136634-1|AAF70238.1| 67|Homo sapiens chordin protein. 31 8.1
AF076612-1|AAC69835.1| 801|Homo sapiens chordin protein. 31 8.1
AB208947-1|BAD92184.1| 333|Homo sapiens chordin isoform a varia... 31 8.1
>BC094778-1|AAH94778.1| 468|Homo sapiens midnolin protein.
Length = 468
Score = 37.1 bits (82), Expect = 0.12
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +3
Query: 651 GRPKRDISTIIHILNDLLCAT 713
GRP+RDI TI+ ILNDLL AT
Sbjct: 297 GRPRRDIGTILQILNDLLSAT 317
>BC015089-1|AAH15089.2| 174|Homo sapiens MIDN protein protein.
Length = 174
Score = 37.1 bits (82), Expect = 0.12
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = +3
Query: 651 GRPKRDISTIIHILNDLLCAT 713
GRP+RDI TI+ ILNDLL AT
Sbjct: 3 GRPRRDIGTILQILNDLLSAT 23
>U70136-1|AAB09089.1| 1404|Homo sapiens megakaryocyte stimulating
factor protein.
Length = 1404
Score = 33.5 bits (73), Expect = 1.5
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Frame = +3
Query: 840 TSTDKKDCS-CKLTHCQCIRLAPVACASCVTKTPDEICKKCD-TAKAL-AMENSKTKCNX 1010
TST +D + K+T + LAP + T T EI K + TAK NSK
Sbjct: 961 TSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPK 1020
Query: 1011 NNXGSYAPKNRDERGEVKTMPYAIXPQAXPXP 1106
+ APK + KTMP P+ P P
Sbjct: 1021 PQKPTKAPKKPTSTKKPKTMPRVRKPKTTPTP 1052
>AL133553-1|CAC36090.1| 1404|Homo sapiens proteoglycan 4 protein.
Length = 1404
Score = 33.5 bits (73), Expect = 1.5
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Frame = +3
Query: 840 TSTDKKDCS-CKLTHCQCIRLAPVACASCVTKTPDEICKKCD-TAKAL-AMENSKTKCNX 1010
TST +D + K+T + LAP + T T EI K + TAK NSK
Sbjct: 961 TSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPK 1020
Query: 1011 NNXGSYAPKNRDERGEVKTMPYAIXPQAXPXP 1106
+ APK + KTMP P+ P P
Sbjct: 1021 PQKPTKAPKKPTSTKKPKTMPRVRKPKTTPTP 1052
>AK131434-1|BAD18580.1| 933|Homo sapiens protein ( Homo sapiens cDNA
FLJ16561 fis, clone SYNOV4003981, moderately similar to
Homo sapiens proteoglycan 4, (megakaryocyte stimulating
).
Length = 933
Score = 33.5 bits (73), Expect = 1.5
Identities = 30/92 (32%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Frame = +3
Query: 840 TSTDKKDCS-CKLTHCQCIRLAPVACASCVTKTPDEICKKCD-TAKAL-AMENSKTKCNX 1010
TST +D + K+T + LAP + T T EI K + TAK NSK
Sbjct: 490 TSTTTQDTTPFKITTLKTTTLAPKVTTTKKTITTTEIMNKPEETAKPKDRATNSKATTPK 549
Query: 1011 NNXGSYAPKNRDERGEVKTMPYAIXPQAXPXP 1106
+ APK + KTMP P+ P P
Sbjct: 550 PQKPTKAPKKPTSTKKPKTMPRVRKPKTTPTP 581
>BC126370-1|AAI26371.1| 362|Homo sapiens TMEM129 protein protein.
Length = 362
Score = 33.1 bits (72), Expect = 2.0
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Frame = +3
Query: 636 VCSRYGRP-KRDISTIIH-ILNDLLCATPPIALAQKDPSHSCASTEEQTKCVGCSQPSCL 809
+C + P +R +IH L DL T +L + +P++S S++E C+GC Q
Sbjct: 236 LCEKLRAPIRRAAHVVIHQSLGDLFLETFA-SLVEVNPAYSVPSSQELEACIGCMQT--- 291
Query: 810 YGQCDGHLPSTSTDKKDCSCKLTHCQCIRLAPVACASCVTK 932
+ L T + C+ +C+ P+ C +C+ K
Sbjct: 292 --RASVKLVKTCQEAATGECQQCYCR-----PMWCLTCMGK 325
>AJ628245-1|CAF31637.1| 177|Homo sapiens keratin associated protein
5-8 protein.
Length = 177
Score = 32.7 bits (71), Expect = 2.6
Identities = 20/61 (32%), Positives = 24/61 (39%)
Frame = +3
Query: 750 SCASTEEQTKCVGCSQPSCLYGQCDGHLPSTSTDKKDCSCKLTHCQCIRLAPVACASCVT 929
SC ++ GCSQ SC C +S + C CK CQ PV C S
Sbjct: 100 SCGGSKGGCGSCGCSQSSCCKPCCCSSGCGSSCCQSSC-CKPCCCQSSCCVPVCCQSSCC 158
Query: 930 K 932
K
Sbjct: 159 K 159
>AF348997-1|AAO32957.1| 61|Homo sapiens MTE protein.
Length = 61
Score = 32.7 bits (71), Expect = 2.6
Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Frame = +3
Query: 798 PSCLYGQCDGHLPSTSTDKKDCSCKLTHCQCIRLAPVACA----SCVTKTPDEICKKC 959
P+C +TS+ ++C C C PV CA CV K + C C
Sbjct: 3 PNCSCSTSSSCTCTTSSKSRECKCTSCKTSCCSCCPVGCAKCAQGCVCKGTSDKCSCC 60
>AB126080-1|BAD20207.1| 156|Homo sapiens keratin associated protein
protein.
Length = 156
Score = 32.7 bits (71), Expect = 2.6
Identities = 19/61 (31%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Frame = +3
Query: 750 SCASTEEQTKCVGCSQPSCLYGQCD----GHLPSTSTDKKDCSCKLTHCQCIRLAPVACA 917
SC S++ GCSQ +C C G S+ K C C+ + CQ P C
Sbjct: 69 SCGSSKGGCGSCGCSQSNCCKPCCSSSGCGSFCCQSSCSKPCCCQSSCCQSSCCKPCCCQ 128
Query: 918 S 920
S
Sbjct: 129 S 129
>AB126071-1|BAD20198.1| 177|Homo sapiens keratin associated protein
protein.
Length = 177
Score = 32.7 bits (71), Expect = 2.6
Identities = 20/61 (32%), Positives = 24/61 (39%)
Frame = +3
Query: 750 SCASTEEQTKCVGCSQPSCLYGQCDGHLPSTSTDKKDCSCKLTHCQCIRLAPVACASCVT 929
SC ++ GCSQ SC C +S + C CK CQ PV C S
Sbjct: 100 SCGGSKGGCGSCGCSQSSCCKPCCCSSGCGSSCCQSSC-CKPCCCQSSCCVPVCCQSSCC 158
Query: 930 K 932
K
Sbjct: 159 K 159
>X55077-1|CAA38905.1| 591|Homo sapiens alpha-2 macroglobulin
receptor protein.
Length = 591
Score = 31.9 bits (69), Expect = 4.6
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Frame = +3
Query: 789 CSQPSCLYGQ--CDG-HLPSTSTDKKDCS---------CKLTHCQCIRLAPVACASCVTK 932
C+ C+ G+ CDG H + +D+KDC+ CK HC +R A A C+
Sbjct: 308 CANGRCIAGRWKCDGDHDCADGSDEKDCTPRCDMDQFQCKSGHCIPLRWRCDADADCMDG 367
Query: 933 TPDEIC 950
+ +E C
Sbjct: 368 SDEEAC 373
>X13916-1|CAA32112.1| 4544|Homo sapiens LDL-receptor related precursor
(AA -19 to 4525) protein.
Length = 4544
Score = 31.9 bits (69), Expect = 4.6
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Frame = +3
Query: 789 CSQPSCLYGQ--CDG-HLPSTSTDKKDCS---------CKLTHCQCIRLAPVACASCVTK 932
C+ C+ G+ CDG H + +D+KDC+ CK HC +R A A C+
Sbjct: 3582 CANGRCIAGRWKCDGDHDCADGSDEKDCTPRCDMDQFQCKSGHCIPLRWRCDADADCMDG 3641
Query: 933 TPDEIC 950
+ +E C
Sbjct: 3642 SDEEAC 3647
>DQ314873-1|ABC40732.1| 4544|Homo sapiens low density
lipoprotein-related protein 1 (alpha-2-macroglobulin
receptor) protein.
Length = 4544
Score = 31.9 bits (69), Expect = 4.6
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Frame = +3
Query: 789 CSQPSCLYGQ--CDG-HLPSTSTDKKDCS---------CKLTHCQCIRLAPVACASCVTK 932
C+ C+ G+ CDG H + +D+KDC+ CK HC +R A A C+
Sbjct: 3582 CANGRCIAGRWKCDGDHDCADGSDEKDCTPRCDMDQFQCKSGHCIPLRWRCDADADCMDG 3641
Query: 933 TPDEIC 950
+ +E C
Sbjct: 3642 SDEEAC 3647
>AF058427-1|AAC64265.1| 4544|Homo sapiens lipoprotein receptor-related
protein protein.
Length = 4544
Score = 31.9 bits (69), Expect = 4.6
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Frame = +3
Query: 789 CSQPSCLYGQ--CDG-HLPSTSTDKKDCS---------CKLTHCQCIRLAPVACASCVTK 932
C+ C+ G+ CDG H + +D+KDC+ CK HC +R A A C+
Sbjct: 3582 CANGRCIAGRWKCDGDHDCADGSDEKDCTPRCDMDQFQCKSGHCIPLRWRCDADADCMDG 3641
Query: 933 TPDEIC 950
+ +E C
Sbjct: 3642 SDEEAC 3647
>AB209498-1|BAD92735.1| 2359|Homo sapiens low density
lipoprotein-related protein 1 variant protein.
Length = 2359
Score = 31.9 bits (69), Expect = 4.6
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Frame = +3
Query: 789 CSQPSCLYGQ--CDG-HLPSTSTDKKDCS---------CKLTHCQCIRLAPVACASCVTK 932
C+ C+ G+ CDG H + +D+KDC+ CK HC +R A A C+
Sbjct: 1398 CANGRCIAGRWKCDGDHDCADGSDEKDCTPRCDMDQFQCKSGHCIPLRWRCDADADCMDG 1457
Query: 933 TPDEIC 950
+ +E C
Sbjct: 1458 SDEEAC 1463
>M55210-1|AAA59492.1| 1609|Homo sapiens laminin B2 chain protein.
Length = 1609
Score = 31.5 bits (68), Expect = 6.1
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +3
Query: 738 DPSHSCASTEEQTKCVGCSQPSCLYGQCDGHLPSTSTDKKDCSCKL-THCQCI-RLAPVA 911
DP + + T C + C G TS+D + C C + C + + V
Sbjct: 734 DPETGVCNCRDNTAGPHCEK--CSDGYYGDSTAGTSSDCQPCPCPGGSSCAVVPKTKEVV 791
Query: 912 CASCVTKTPDEICKKCD 962
C +C T T + C+ CD
Sbjct: 792 CTNCPTGTTGKRCELCD 808
>J03202-1|AAA59488.1| 1609|Homo sapiens LAMB2 protein.
Length = 1609
Score = 31.5 bits (68), Expect = 6.1
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +3
Query: 738 DPSHSCASTEEQTKCVGCSQPSCLYGQCDGHLPSTSTDKKDCSCKL-THCQCI-RLAPVA 911
DP + + T C + C G TS+D + C C + C + + V
Sbjct: 734 DPETGVCNCRDNTAGPHCEK--CSDGYYGDSTAGTSSDCQPCPCPGGSSCAVVPKTKEVV 791
Query: 912 CASCVTKTPDEICKKCD 962
C +C T T + C+ CD
Sbjct: 792 CTNCPTGTTGKRCELCD 808
>AL450304-5|CAI14877.1| 1609|Homo sapiens laminin, gamma 1 (formerly
LAMB2) protein.
Length = 1609
Score = 31.5 bits (68), Expect = 6.1
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +3
Query: 738 DPSHSCASTEEQTKCVGCSQPSCLYGQCDGHLPSTSTDKKDCSCKL-THCQCI-RLAPVA 911
DP + + T C + C G TS+D + C C + C + + V
Sbjct: 734 DPETGVCNCRDNTAGPHCEK--CSDGYYGDSTAGTSSDCQPCPCPGGSSCAVVPKTKEVV 791
Query: 912 CASCVTKTPDEICKKCD 962
C +C T T + C+ CD
Sbjct: 792 CTNCPTGTTGKRCELCD 808
>AL354953-3|CAH70981.1| 1609|Homo sapiens laminin, gamma 1 (formerly
LAMB2) protein.
Length = 1609
Score = 31.5 bits (68), Expect = 6.1
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Frame = +3
Query: 738 DPSHSCASTEEQTKCVGCSQPSCLYGQCDGHLPSTSTDKKDCSCKL-THCQCI-RLAPVA 911
DP + + T C + C G TS+D + C C + C + + V
Sbjct: 734 DPETGVCNCRDNTAGPHCEK--CSDGYYGDSTAGTSSDCQPCPCPGGSSCAVVPKTKEVV 791
Query: 912 CASCVTKTPDEICKKCD 962
C +C T T + C+ CD
Sbjct: 792 CTNCPTGTTGKRCELCD 808
>BC112345-1|AAI12346.1| 955|Homo sapiens chordin, isoform a
protein.
Length = 955
Score = 31.1 bits (67), Expect = 8.1
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +3
Query: 861 CSCK----LTHCQCIRLAPVACASCVTKTPDEICKKC 959
C+CK HC+ ++ +ACA V P + CK+C
Sbjct: 814 CTCKGGTGEVHCEKVQCPRLACAQPVRVNPTDCCKQC 850
>BC029879-1|AAH29879.1| 413|Homo sapiens Unknown (protein for
IMAGE:5175884) protein.
Length = 413
Score = 31.1 bits (67), Expect = 8.1
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +3
Query: 861 CSCK----LTHCQCIRLAPVACASCVTKTPDEICKKC 959
C+CK HC+ ++ +ACA V P + CK+C
Sbjct: 272 CTCKGGTGEVHCEKVQCPRLACAQPVRVNPTDCCKQC 308
>AY358926-1|AAQ89285.1| 954|Homo sapiens chordin protein.
Length = 954
Score = 31.1 bits (67), Expect = 8.1
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +3
Query: 861 CSCK----LTHCQCIRLAPVACASCVTKTPDEICKKC 959
C+CK HC+ ++ +ACA V P + CK+C
Sbjct: 814 CTCKGGTGEVHCEKVQCPRLACAQPVRVNPTDCCKQC 850
>AF209928-1|AAG35767.1| 955|Homo sapiens chordin protein.
Length = 955
Score = 31.1 bits (67), Expect = 8.1
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +3
Query: 861 CSCK----LTHCQCIRLAPVACASCVTKTPDEICKKC 959
C+CK HC+ ++ +ACA V P + CK+C
Sbjct: 814 CTCKGGTGEVHCEKVQCPRLACAQPVRVNPTDCCKQC 850
>AF136634-1|AAF70238.1| 67|Homo sapiens chordin protein.
Length = 67
Score = 31.1 bits (67), Expect = 8.1
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +3
Query: 861 CSCK----LTHCQCIRLAPVACASCVTKTPDEICKKC 959
C+CK HC+ ++ +ACA V P + CK+C
Sbjct: 31 CTCKGGTGEVHCEKVQCPRLACAQPVRVNPTDCCKQC 67
>AF076612-1|AAC69835.1| 801|Homo sapiens chordin protein.
Length = 801
Score = 31.1 bits (67), Expect = 8.1
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +3
Query: 861 CSCK----LTHCQCIRLAPVACASCVTKTPDEICKKC 959
C+CK HC+ ++ +ACA V P + CK+C
Sbjct: 660 CTCKGGTGEVHCEKVQCPRLACAQPVRVNPTDCCKQC 696
>AB208947-1|BAD92184.1| 333|Homo sapiens chordin isoform a variant
protein.
Length = 333
Score = 31.1 bits (67), Expect = 8.1
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +3
Query: 861 CSCK----LTHCQCIRLAPVACASCVTKTPDEICKKC 959
C+CK HC+ ++ +ACA V P + CK+C
Sbjct: 192 CTCKGGTGEVHCEKVQCPRLACAQPVRVNPTDCCKQC 228
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,748,996
Number of Sequences: 237096
Number of extensions: 2919457
Number of successful extensions: 4917
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4884
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16458822770
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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