Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_E05
         (1220 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            31   0.090
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   0.62 
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    27   0.84 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.84 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    27   1.1  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 30.7 bits (66), Expect = 0.090
 Identities = 17/49 (34%), Positives = 17/49 (34%)
 Frame = +1

Query: 751 PPKXPPPPPXXPXPXXXXXXXXXXXRGXGXXXXXPPXGNXXXGGGXPPP 897
           PP  PPPPP  P P              G     PP  N    GG  PP
Sbjct: 582 PPAPPPPPPMGPPPSPLAGGPL-----GGPAGSRPPLPNLLGFGGAAPP 625



 Score = 29.5 bits (63), Expect = 0.21
 Identities = 19/57 (33%), Positives = 19/57 (33%)
 Frame = -3

Query: 615 LXPFXKNFFXGXPPLXXGXPXPPXXGGXXPPPPXXXGXXXFXGGGGGGAPXXXPPXP 445
           L P    F  G P L    P P       PPPP         GG  GG     PP P
Sbjct: 562 LNPAQLRFPAGFPNLPNAQPPP----APPPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 25.0 bits (52), Expect = 4.5
 Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 7/24 (29%)
 Frame = +3

Query: 438 PPXGXG-------GXXXGPPPPPP 488
           PP G G       G   GPPPPPP
Sbjct: 512 PPHGAGYDGRDLTGGPLGPPPPPP 535



 Score = 24.6 bits (51), Expect = 5.9
 Identities = 9/22 (40%), Positives = 9/22 (40%)
 Frame = +3

Query: 750 PPQKXPPXPPXSXPPXKKKNXP 815
           PP   PP PP   PP      P
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGP 602


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.4 bits (53), Expect = 3.4
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +1

Query: 745 GXPPKXPPPPPXXPXP 792
           G PP  PPPPP    P
Sbjct: 781 GSPPPPPPPPPSSLSP 796



 Score = 23.8 bits (49), Expect(2) = 0.62
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = +2

Query: 467 GAPPPPPP 490
           G+PPPPPP
Sbjct: 781 GSPPPPPP 788



 Score = 22.2 bits (45), Expect(2) = 0.62
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +2

Query: 473 PPPPPPXKXXXP 508
           PPPPPP     P
Sbjct: 785 PPPPPPPSSLSP 796


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 27.5 bits (58), Expect = 0.84
 Identities = 17/53 (32%), Positives = 19/53 (35%)
 Frame = +2

Query: 767 PXPPXXXXPXKKKKXPPXXPGXXGXXXXXPPXGIXPXGXGPPPXRGGXXKXPP 925
           P  P    P      PP  PG        PP  + P G  PPP  G   + PP
Sbjct: 71  PPKPNISIPPPTMNMPPR-PGMIPGMPGAPPLLMGPNGPLPPPMMG--MRPPP 120



 Score = 25.8 bits (54), Expect = 2.6
 Identities = 12/24 (50%), Positives = 12/24 (50%), Gaps = 3/24 (12%)
 Frame = -1

Query: 584 GXPPFX---GGPLXPPXXGGXPPP 522
           G PP      GPL PP  G  PPP
Sbjct: 97  GAPPLLMGPNGPLPPPMMGMRPPP 120


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.5 bits (58), Expect = 0.84
 Identities = 17/60 (28%), Positives = 19/60 (31%)
 Frame = +2

Query: 767 PXPPXXXXPXKKKKXPPXXPGXXGXXXXXPPXGIXPXGXGPPPXRGGXXKXPPXNHXXGP 946
           P PP    P + +  P   PG        PP      G   PP  G      P N   GP
Sbjct: 219 PQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSA---QGMQRPPMMGQPPPIRPPNPMGGP 275



 Score = 25.4 bits (53), Expect = 3.4
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 853 PPXGNXXXGGGXPP 894
           PP GN   GGG PP
Sbjct: 333 PPSGNDNMGGGPPP 346


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 27.1 bits (57), Expect = 1.1
 Identities = 11/21 (52%), Positives = 11/21 (52%)
 Frame = +1

Query: 517 GGGGGXPPXXGGXRGPPXKGG 579
           G GGG P   GG  G P  GG
Sbjct: 206 GSGGGAPGGGGGSSGGPGPGG 226



 Score = 22.2 bits (45), Expect(2) = 4.6
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -3

Query: 489 GGGGGGAPXXXPPXPXGGG 433
           GGGGG +    P    GGG
Sbjct: 213 GGGGGSSGGPGPGGGGGGG 231



 Score = 20.6 bits (41), Expect(2) = 4.6
 Identities = 11/38 (28%), Positives = 12/38 (31%)
 Frame = -3

Query: 585 GXPPLXXGXPXPPXXGGXXPPPPXXXGXXXFXGGGGGG 472
           G P +  G              P   G     GGGGGG
Sbjct: 137 GIPSVAHGGGSGAIHASPNAQNPSSGGRSSSGGGGGGG 174


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,069
Number of Sequences: 2352
Number of extensions: 14002
Number of successful extensions: 81
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 138973980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)