Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_D22
         (1286 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350...    26   3.1  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    26   3.8  

>01_07_0021 -
           40533864-40534583,40534779-40534814,40534909-40535048,
           40535837-40535922,40536430-40536653,40536770-40536865,
           40538766-40538833,40539945-40540055,40540799-40540955
          Length = 545

 Score = 25.8 bits (54), Expect(2) = 3.1
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 408 PPPPXXPPPP 379
           PPPP  PPPP
Sbjct: 431 PPPPEHPPPP 440



 Score = 23.0 bits (47), Expect(2) = 3.1
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 402 PPXXPPPPP 376
           PP  PPPPP
Sbjct: 453 PPPVPPPPP 461


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 25.8 bits (54), Expect(2) = 3.8
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 408 PPPPXXPPPP 379
           PPPP  PPPP
Sbjct: 634 PPPPPPPPPP 643



 Score = 22.6 bits (46), Expect(2) = 3.8
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 405 PPPXXPPPPP 376
           P P  PPPPP
Sbjct: 663 PAPPPPPPPP 672


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,601,158
Number of Sequences: 37544
Number of extensions: 211996
Number of successful extensions: 9854
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5675
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4004040288
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)