Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_D22
         (1286 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113383-1|AAM29388.1|  242|Drosophila melanogaster RE04770p pro...    26   0.93 
AE014296-227|AAF47476.2|  242|Drosophila melanogaster CG9184-PA,...    26   0.93 
BT011463-1|AAR99121.1|  212|Drosophila melanogaster RE25907p pro...    26   0.95 
AE014296-226|AAN11471.1|  212|Drosophila melanogaster CG9184-PB,...    26   0.95 

>AY113383-1|AAM29388.1|  242|Drosophila melanogaster RE04770p
           protein.
          Length = 242

 Score = 25.8 bits (54), Expect(2) = 0.93
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 408 PPPPXXPPPP 379
           PPPP  PPPP
Sbjct: 126 PPPPPGPPPP 135



 Score = 25.8 bits (54), Expect(2) = 0.93
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 405 PPPXXPPPPP 376
           PPP  PPPPP
Sbjct: 132 PPPPGPPPPP 141


>AE014296-227|AAF47476.2|  242|Drosophila melanogaster CG9184-PA,
           isoform A protein.
          Length = 242

 Score = 25.8 bits (54), Expect(2) = 0.93
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 408 PPPPXXPPPP 379
           PPPP  PPPP
Sbjct: 126 PPPPPGPPPP 135



 Score = 25.8 bits (54), Expect(2) = 0.93
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 405 PPPXXPPPPP 376
           PPP  PPPPP
Sbjct: 132 PPPPGPPPPP 141


>BT011463-1|AAR99121.1|  212|Drosophila melanogaster RE25907p
           protein.
          Length = 212

 Score = 25.8 bits (54), Expect(2) = 0.95
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 408 PPPPXXPPPP 379
           PPPP  PPPP
Sbjct: 96  PPPPPGPPPP 105



 Score = 25.8 bits (54), Expect(2) = 0.95
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 405 PPPXXPPPPP 376
           PPP  PPPPP
Sbjct: 102 PPPPGPPPPP 111


>AE014296-226|AAN11471.1|  212|Drosophila melanogaster CG9184-PB,
           isoform B protein.
          Length = 212

 Score = 25.8 bits (54), Expect(2) = 0.95
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 408 PPPPXXPPPP 379
           PPPP  PPPP
Sbjct: 96  PPPPPGPPPP 105



 Score = 25.8 bits (54), Expect(2) = 0.95
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 405 PPPXXPPPPP 376
           PPP  PPPPP
Sbjct: 102 PPPPGPPPPP 111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,138,635
Number of Sequences: 53049
Number of extensions: 310333
Number of successful extensions: 10115
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6101
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6947228805
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)