Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_D22
(1286 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 6.7
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 9.4
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 29 9.4
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 29 9.4
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr... 29 9.4
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 9.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 9.4
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 9.4
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 9.4
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 9.4
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 9.4
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 9.4
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 9.4
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ... 29 9.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 9.4
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 57 PPPPMCPPPPP 67
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 69 PPPPMCPPPPP 79
Score = 25.8 bits (54), Expect(2) = 6.7
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3
Query: 405 PPPXXPPPPP 376
PPP PPPPP
Sbjct: 63 PPPPPPPPPP 72
Score = 21.8 bits (44), Expect(2) = 6.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 408 PPPPXXPPPP 379
PPP PPPP
Sbjct: 40 PPPLPCPPPP 49
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 357 PPPPPPPPPPP 367
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 358 PPPPPPPPPPP 368
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 359 PPPPPPPPPPP 369
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 360 PPPPPPPPPPP 370
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 786 PPPPPVPPPPP 796
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 787 PPPPVPPPPPP 797
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 360 PPPPPPPPPPP 370
>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 818 PPPPPLPPPPP 828
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 302 PPPPPPPPPPP 312
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 302 PPPPPPPPPPP 312
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 134 PPPPPSPPPPP 144
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 135 PPPPSPPPPPP 145
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 136 PPPPHYPPPPP 146
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 143 PPPPHYPPPPP 153
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 66 PPPPICPPPPP 76
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 2 PPPPPPPPPPP 12
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 3 PPPPPPPPPPP 13
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 4 PPPPPPPPPPP 14
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 5 PPPPPPPPPPP 15
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 6 PPPPPPPPPPP 16
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 7 PPPPPPPPPPP 17
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 2 PPPPPPPPPPP 12
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 3 PPPPPPPPPPP 13
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 4 PPPPPPPPPPP 14
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 5 PPPPPPPPPPP 15
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 6 PPPPPPPPPPP 16
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 7 PPPPPPPPPPP 17
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 512 PPPPPPPPPPP 522
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 513 PPPPPPPPPPP 523
>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
protein T08A11.1 protein.
Length = 1872
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 818 PPPPPLPPPPP 828
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 9.4
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3
Query: 408 PPPPXXPPPPP 376
PPPP PPPPP
Sbjct: 1338 PPPPPPPPPPP 1348
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,644,353
Number of Sequences: 27780
Number of extensions: 107037
Number of successful extensions: 2603
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1556
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3599888010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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