SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_D19
         (1245 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    24   2.4  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    24   2.4  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    24   2.4  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    24   2.4  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    24   2.4  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    24   2.4  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    24   2.4  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    24   2.4  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    24   2.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   4.2  

>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 13/44 (29%), Positives = 15/44 (34%)
 Frame = -3

Query: 442 PXFFPPFFXXXXPXPXXXFFFXGXPPPPXXGAPPPXVFPFXXPP 311
           P  FP ++    P P   F       P      PP  FP   PP
Sbjct: 114 PVPFPVYYGNFPPRPMGPFVSMQEQIPRFRYIGPPTPFPRFIPP 157


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 13/44 (29%), Positives = 15/44 (34%)
 Frame = -3

Query: 442 PXFFPPFFXXXXPXPXXXFFFXGXPPPPXXGAPPPXVFPFXXPP 311
           P  FP ++    P P   F       P      PP  FP   PP
Sbjct: 114 PVPFPVYYGNFPPRPMGPFVSMQEQIPRFRYIGPPTPFPRFIPP 157


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 13/44 (29%), Positives = 15/44 (34%)
 Frame = -3

Query: 442 PXFFPPFFXXXXPXPXXXFFFXGXPPPPXXGAPPPXVFPFXXPP 311
           P  FP ++    P P   F       P      PP  FP   PP
Sbjct: 114 PVPFPVYYGNFPPRPMGPFVSMQEQIPRFRYIGPPTPFPRFIPP 157


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 13/44 (29%), Positives = 15/44 (34%)
 Frame = -3

Query: 442 PXFFPPFFXXXXPXPXXXFFFXGXPPPPXXGAPPPXVFPFXXPP 311
           P  FP ++    P P   F       P      PP  FP   PP
Sbjct: 114 PVPFPVYYGNFPPRPMGPFVSMQEQIPRFRYIGPPTPFPRFIPP 157


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 13/44 (29%), Positives = 15/44 (34%)
 Frame = -3

Query: 442 PXFFPPFFXXXXPXPXXXFFFXGXPPPPXXGAPPPXVFPFXXPP 311
           P  FP ++    P P   F       P      PP  FP   PP
Sbjct: 347 PVPFPVYYGNFPPRPMGPFVSIQEQIPRFRYIGPPTSFPRFIPP 390


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 13/44 (29%), Positives = 15/44 (34%)
 Frame = -3

Query: 442 PXFFPPFFXXXXPXPXXXFFFXGXPPPPXXGAPPPXVFPFXXPP 311
           P  FP ++    P P   F       P      PP  FP   PP
Sbjct: 347 PVPFPVYYGNFPPRPMGPFVSIQEQIPRFRYIGPPTSFPRFIPP 390


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 13/44 (29%), Positives = 15/44 (34%)
 Frame = -3

Query: 442 PXFFPPFFXXXXPXPXXXFFFXGXPPPPXXGAPPPXVFPFXXPP 311
           P  FP ++    P P   F       P      PP  FP   PP
Sbjct: 347 PVPFPVYYGNFPPRPMGPFVSIQEQIPRFRYIGPPTSFPRFIPP 390


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 13/44 (29%), Positives = 15/44 (34%)
 Frame = -3

Query: 442 PXFFPPFFXXXXPXPXXXFFFXGXPPPPXXGAPPPXVFPFXXPP 311
           P  FP ++    P P   F       P      PP  FP   PP
Sbjct: 347 PVPFPVYYGNFPPRPMGPFVSIQEQIPRLRYIGPPTSFPRFIPP 390


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 24.2 bits (50), Expect = 2.4
 Identities = 13/44 (29%), Positives = 15/44 (34%)
 Frame = -3

Query: 442 PXFFPPFFXXXXPXPXXXFFFXGXPPPPXXGAPPPXVFPFXXPP 311
           P  FP ++    P P   F       P      PP  FP   PP
Sbjct: 336 PVPFPVYYGNFPPRPMGPFVSIQEQIPRFRYIGPPTSFPRFIPP 379


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 11/29 (37%), Positives = 12/29 (41%)
 Frame = +3

Query: 690 PXGGXKXPPXXGGPXPXXPXXXRXXXGPP 776
           P GG + PP  G P P  P        PP
Sbjct: 404 PAGG-QLPPSAGAPMPPIPNMSNMSGMPP 431


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.314    0.155    0.548 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 292,120
Number of Sequences: 438
Number of extensions: 11972
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42502302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)

- SilkBase 1999-2023 -