Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_D18
         (1183 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.4  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    23   4.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           23   4.5  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   5.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   5.9  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   5.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 3.4
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = -2

Query: 624 SLKVRFTNNIVIFSV*LNVIFRIYH-RFTLVVFLSFFLC*WYCECLLLFY 478
           SL+V   +++V     L  I+  Y    T  V L F LC  Y    LLFY
Sbjct: 37  SLQVGILDSLVFKCYNLRRIYYFYCVSITFNVHLLFLLCSGYFTVHLLFY 86


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 8/43 (18%), Positives = 23/43 (53%)
 Frame = +1

Query: 463 YLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTEN 591
           + N R+K ++   +P+ +  R+K + +     ++  + + T+N
Sbjct: 281 FQNRRMKWKKDNKLPNTKNVRRKTNPAGVTTTTKGKVRAKTQN 323


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.0 bits (47), Expect = 4.5
 Identities = 8/43 (18%), Positives = 23/43 (53%)
 Frame = +1

Query: 463 YLNLRVKQEQTFTIPSAQKKRKKNHKSESVVNSENDIESNTEN 591
           + N R+K ++   +P+ +  R+K + +     ++  + + T+N
Sbjct: 281 FQNRRMKWKKDNKLPNTKNVRRKTNPAGVTTTTKGKVRAKTQN 323


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 514 QKKRKKNHKSESVVNSENDIESNTENNN 597
           +K  K+ H+S    + ++D  SN+EN N
Sbjct: 277 EKIDKEEHESMDDDDDDDDDMSNSENQN 304


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = -2

Query: 180 IYICSFCHFFSIRC 139
           +Y+ +  HFFS++C
Sbjct: 340 LYVLNMEHFFSVKC 353


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -3

Query: 962 LXLQFLAYHDLVQLLDMKQFDFSTLLHCL 876
           + L   AYH  V ++ +K+  +STL   L
Sbjct: 74  ISLYLNAYHVFVTMMTLKRHKWSTLFEIL 102


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,924
Number of Sequences: 336
Number of extensions: 2884
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 34537495
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)