BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_D16
(1277 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 36 0.052
01_03_0005 + 11568545-11569119,11569179-11569191 36 0.052
07_03_1136 + 24218601-24218734,24218769-24219906 34 0.28
02_05_0686 - 30900748-30902167,30903442-30904742 34 0.28
02_04_0400 - 22608519-22608844,22609044-22609122 33 0.37
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 33 0.64
07_01_0479 + 3606663-3607448 32 0.84
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 32 1.1
07_03_1140 - 24258627-24258849,24259967-24260089,24260200-242609... 31 1.5
07_03_0559 + 19475893-19476783 31 1.9
07_03_0560 + 19479597-19480667 31 2.6
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 31 2.6
07_01_0176 - 1244704-1245102 29 5.9
02_05_0962 + 33114226-33114684,33114806-33114853,33115166-331152... 29 5.9
04_04_1182 + 31531426-31531702,31533741-31533997,31534672-315348... 29 7.9
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 29 7.9
03_02_0148 - 5928703-5928931,5929099-5929171,5929288-5929408,592... 29 7.9
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225 29 7.9
01_01_0006 + 26221-26292,26370-26641,27090-27293,27365-27419 29 7.9
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 36.3 bits (80), Expect = 0.052
Identities = 32/108 (29%), Positives = 32/108 (29%), Gaps = 4/108 (3%)
Frame = +3
Query: 948 PPPPRGXXGFXFWGPXPXSPXXXXXXPXXXX----GGXXVXPPPXGGXXGXPPXXGGXPX 1115
PPPP G G P P P P GG PPP G G PP
Sbjct: 1123 PPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNA---- 1178
Query: 1116 XKXXXXXGPXXGPXPXXGXGXGGXXPXXPPPXXXXXKXXXXXXGGXPP 1259
G P P G G G P PP GG PP
Sbjct: 1179 -----HGGVAPPPPPPRGHGGVGGPP--TPPGAPAPPMPPGVPGGPPP 1219
Score = 33.9 bits (74), Expect = 0.28
Identities = 39/172 (22%), Positives = 40/172 (23%), Gaps = 3/172 (1%)
Frame = -1
Query: 1259 GGXPPPXXXXXFXXXXXGGGXXXXXPPPPXPXXGXXXXXGXXXXXXFXXGXPPXXXGXXX 1080
GG P P G PP P P G P G
Sbjct: 1057 GGAPSPPSPPPPQRENTSVGIQGGIPPLPPPLPPTLGDYGVAPPP------PSIGAGAPP 1110
Query: 1079 XPPPXGGXNPXPPPXXXGXXXXXXXGXXXXXPK--XKXPXPPGGGGXXXXXKXXXXXXXX 906
PPP GG PPP G P+ P PP GG
Sbjct: 1111 PPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFR 1170
Query: 905 XXXXXKXXXGGXXXXXXXXXGXXXXXXPPXXP-XKXXFXPPXXGGGXXXPXG 753
GG G PP P PP GG P G
Sbjct: 1171 GGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPG 1222
Score = 33.5 bits (73), Expect = 0.37
Identities = 26/86 (30%), Positives = 26/86 (30%)
Frame = -2
Query: 1204 GGXXGKXPPXPXPXXGXGPXXGPXXXXXFXXGXPPXXGGXPXXPPXGGGXTXXPPXXXXG 1025
GG G PP P G G P P GG P PP GG P G
Sbjct: 1116 GGITGVPPPPPI--GGLGGHQAPPAPPL-----PEGIGGVPPPPPVGGLGGPPAPPPPAG 1168
Query: 1024 XXXXXXGXXGXGPQKXXPXXPRGGGG 947
G P PRG GG
Sbjct: 1169 FRGGTPPPNAHGGVAPPPPPPRGHGG 1194
Score = 31.5 bits (68), Expect = 1.5
Identities = 21/73 (28%), Positives = 21/73 (28%), Gaps = 1/73 (1%)
Frame = -2
Query: 1258 GGXPPXXXXXXFXXXXXGGGXXGKXPPXPXPXXGXGPXXGPXXXXXFXXGX-PPXXGGXP 1082
GG P F G P P P G G GP PP G P
Sbjct: 1158 GGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGP 1217
Query: 1081 XXPPXGGGXTXXP 1043
PP G G P
Sbjct: 1218 PPPPGGRGLPAPP 1230
Score = 30.3 bits (65), Expect = 3.4
Identities = 28/104 (26%), Positives = 28/104 (26%)
Frame = -1
Query: 1259 GGXPPPXXXXXFXXXXXGGGXXXXXPPPPXPXXGXXXXXGXXXXXXFXXGXPPXXXGXXX 1080
GG PPP GG PPPP G P G
Sbjct: 1146 GGVPPPPPV--------GGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGG 1197
Query: 1079 XPPPXGGXNPXPPPXXXGXXXXXXXGXXXXXPKXKXPXPPGGGG 948
P P G P PP G G P PPGG G
Sbjct: 1198 PPTPPGAPAPPMPPGVPGGPPPPPGGRG-------LPAPPGGRG 1234
Score = 29.9 bits (64), Expect = 4.5
Identities = 30/105 (28%), Positives = 30/105 (28%), Gaps = 18/105 (17%)
Frame = +3
Query: 948 PPPPRGXXGFXFWGPXPXSPXXXXXXPXXXXGGXX--VXPPPXGGXXG--------XPPX 1097
PPP G P P S P GG PPP GG G P
Sbjct: 1085 PPPLPPTLGDYGVAPPPPSIGAGAPPPPPPPGGITGVPPPPPIGGLGGHQAPPAPPLPEG 1144
Query: 1098 XGGXPXXKXXXXXGPXXGPXPXXG--------XGXGGXXPXXPPP 1208
GG P G P P G GG P PPP
Sbjct: 1145 IGGVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPP 1189
Score = 29.1 bits (62), Expect = 7.9
Identities = 22/79 (27%), Positives = 23/79 (29%)
Frame = +3
Query: 948 PPPPRGXXGFXFWGPXPXSPXXXXXXPXXXXGGXXVXPPPXGGXXGXPPXXGGXPXXKXX 1127
PP P GF P P + P G V PP PP G P
Sbjct: 1160 PPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPP 1219
Query: 1128 XXXGPXXGPXPXXGXGXGG 1184
G P P G G G
Sbjct: 1220 PPGGRGL-PAPPGGRGVVG 1237
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 36.3 bits (80), Expect = 0.052
Identities = 24/64 (37%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Frame = +1
Query: 895 FXXGXGGGGGGXXXXXKXPPPP---GGXGXXXFGXXXXXPXXXXXXXPXXXGGGXGFXPP 1065
+ G GGGGGG PPPP GG G G P P GGG G
Sbjct: 75 YPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYP------PPTGGGGGGGGGWQ 128
Query: 1066 XGGG 1077
GGG
Sbjct: 129 QGGG 132
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 33.9 bits (74), Expect = 0.28
Identities = 35/127 (27%), Positives = 35/127 (27%), Gaps = 9/127 (7%)
Frame = +1
Query: 754 PXGXXXPPPXXGGXKXXFXGKXGGXXXXXXPXXXXXXXFXPPXXXFFFXXGXGGGG---- 921
P G P P GG G GG P PP G GGGG
Sbjct: 92 PGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPA-----PGGGGGGGAPRR 146
Query: 922 --GGXXXXXKXPPPPGGXGXXXFGXXXXXPXXXXXXXPXXXGGGXGFXP---PXGGGXXX 1086
GG PPGG G GGG G P P GGG
Sbjct: 147 VLGGGGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGG 206
Query: 1087 XPXXXGG 1107
GG
Sbjct: 207 GLGGGGG 213
Score = 33.1 bits (72), Expect = 0.48
Identities = 27/91 (29%), Positives = 28/91 (30%), Gaps = 4/91 (4%)
Frame = -2
Query: 1207 GGGXXGKXPPXPXPXXGXGPXXG--PXXXXXFXXGXPPXXGGXPXXP--PXGGGXTXXPP 1040
GGG G P G G P G PP GG P GGG P
Sbjct: 136 GGGGGGGAPRRVLGGGGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGP 195
Query: 1039 XXXXGXXXXXXGXXGXGPQKXXPXXPRGGGG 947
G G G G + P GGGG
Sbjct: 196 GRAPGGGGGGGGLGGGGGEGGAPERVIGGGG 226
Score = 31.9 bits (69), Expect = 1.1
Identities = 20/55 (36%), Positives = 20/55 (36%)
Frame = -2
Query: 1111 GXPPXXGGXPXXPPXGGGXTXXPPXXXXGXXXXXXGXXGXGPQKXXPXXPRGGGG 947
G PP GG P P GGG PP G G P P GGGG
Sbjct: 89 GLPPGGGGAPG--PLGGGGA-RPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGG 140
Score = 29.5 bits (63), Expect = 5.9
Identities = 32/121 (26%), Positives = 33/121 (27%), Gaps = 7/121 (5%)
Frame = +1
Query: 910 GGGGGGXXXXXKXPPPPGGXGXXXFGXXXXXPXXXXXXXPXXXGGGXGFXP--PXGGGXX 1083
GGGG PPGG G P GGG G P P GGG
Sbjct: 93 GGGGAPGPLGGGGARPPGGGGGGG-----------PPSLPPGAGGGGGARPPAPGGGGGG 141
Query: 1084 XXP-----XXXGGXPXXKXXXXXXPXXXXXPXXGXGGGGXXXXXPPPXXXXXXXXXXXGG 1248
P GG + P G GGGG P GG
Sbjct: 142 GAPRRVLGGGGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGG 201
Query: 1249 G 1251
G
Sbjct: 202 G 202
Score = 29.1 bits (62), Expect = 7.9
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Frame = -2
Query: 1111 GXPPXXGGXPXXPPXGGGXTXXP--PXXXXGXXXXXXGXXGXGPQKXXPXXPRGGGG 947
G P GG PP GGG P P G G G P GGGG
Sbjct: 96 GAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGG 152
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.9 bits (74), Expect = 0.28
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = +3
Query: 948 PPPPRGXXGFXFWGPXPXSPXXXXXXPXXXXGGXXVXPPPXGGXXGXPP 1094
PPPP+G P P P P G PPP GG G PP
Sbjct: 338 PPPPKG--------PPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPP 378
Score = 31.9 bits (69), Expect = 1.1
Identities = 21/78 (26%), Positives = 21/78 (26%)
Frame = -1
Query: 1184 PPPPXPXXGXXXXXGXXXXXXFXXGXPPXXXGXXXXPPPXGGXNPXPPPXXXGXXXXXXX 1005
P PP P PP PPP G P PPP
Sbjct: 311 PAPPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370
Query: 1004 GXXXXXPKXKXPXPPGGG 951
G P P PP GG
Sbjct: 371 GGKKGGP---PPPPPKGG 385
Score = 30.7 bits (66), Expect = 2.6
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = -2
Query: 1189 KXPPXPXPXXGXGPXXGPXXXXXFXXGXPPXXGGXPXXPPXGGGXTXXP 1043
K PP P P G P P P G P PP GG + P
Sbjct: 342 KGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPP 390
Score = 29.9 bits (64), Expect = 4.5
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = +3
Query: 990 PXPXSPXXXXXXPXXXXGGXXVXPPPXGGXXGXPPXXGGXPXXKXXXXXGPXXGPXPXXG 1169
P P P P PPP G PP GP P P G
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPP--PKGPPPPPPAKGPPPPPPPKGPSPPPPPPPG 371
Query: 1170 XGXGGXXPXXPPP 1208
GG P PPP
Sbjct: 372 GKKGG--PPPPPP 382
Score = 29.9 bits (64), Expect = 4.5
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -1
Query: 1106 PPXXXGXXXXPPPXGGXNPXPPPXXXGXXXXXXXGXXXXXPKXKXPXPPGGGG 948
PP PPP G +P PPP G G PK PP G
Sbjct: 346 PPPPAKGPPPPPPPKGPSPPPPPPPGG----KKGGPPPPPPKGGASRPPAAPG 394
Score = 29.5 bits (63), Expect = 5.9
Identities = 22/85 (25%), Positives = 23/85 (27%)
Frame = +3
Query: 948 PPPPRGXXGFXFWGPXPXSPXXXXXXPXXXXGGXXVXPPPXGGXXGXPPXXGGXPXXKXX 1127
PPPP+ P P P P G PPP PP G
Sbjct: 316 PPPPKPAAA----APPPPPPPKAAPPPPPPKGPP---PPPPAKGPPPPPPPKGPSPPPPP 368
Query: 1128 XXXGPXXGPXPXXGXGXGGXXPXXP 1202
G GP P G P P
Sbjct: 369 PPGGKKGGPPPPPPKGGASRPPAAP 393
Score = 29.1 bits (62), Expect = 7.9
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +3
Query: 948 PPPPRGXXGFXFWGPXPXSPXXXXXXPXXXXGGXXVXPPPXGGXXGXPPXXGGXP 1112
PPPP G P P P P G PPP GG PP G P
Sbjct: 344 PPPPPPAKGPPP-PPPPKGPSPPPPPPPGGKKGGPPPPPPKGG-ASRPPAAPGVP 396
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 33.5 bits (73), Expect = 0.37
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +1
Query: 904 GXGGGGGGXXXXXKXPPPPGGXGXXXFGXXXXXPXXXXXXXPXXXGGGXGFXPPXGGG 1077
G GGGGGG GG G G GGG G+ PP GG
Sbjct: 43 GGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGYYPPWNGG 100
Score = 29.9 bits (64), Expect = 4.5
Identities = 21/70 (30%), Positives = 21/70 (30%)
Frame = +1
Query: 904 GXGGGGGGXXXXXKXPPPPGGXGXXXFGXXXXXPXXXXXXXPXXXGGGXGFXPPXGGGXX 1083
G GGGGGG GG G G GGG G GGG
Sbjct: 34 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGGY 93
Query: 1084 XXPXXXGGXP 1113
P G P
Sbjct: 94 YPPWNGGYYP 103
>01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 32.7 bits (71), Expect = 0.64
Identities = 22/75 (29%), Positives = 23/75 (30%)
Frame = +1
Query: 1027 PXXXGGGXGFXPPXGGGXXXXPXXXGGXPXXKXXXXXXPXXXXXPXXGXGGGGXXXXXPP 1206
P GGG G PP G P GG P + GGGG PP
Sbjct: 340 PSSYGGGPGSYPPSYGAPPPNPPYSGGAPGGQGSLPPSYDGGYGGRPMPGGGG--PGAPP 397
Query: 1207 PXXXXXXXXXXXGGG 1251
P GGG
Sbjct: 398 PYHGGGGGGGGGGGG 412
Score = 30.3 bits (65), Expect = 3.4
Identities = 23/86 (26%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Frame = +3
Query: 948 PPPPRGXXGFXFWGPXPXSPXXXXXXPXXXXGGXXVXPPPX-GGXXGXPPXXGGXPXXKX 1124
PPP G + P +P GG PP GG G P GG P
Sbjct: 338 PPPSSYGGGPGSYPPSYGAPPPNPPYSGGAPGGQGSLPPSYDGGYGGRPMPGGGGPGAPP 397
Query: 1125 XXXXGPXXGPXPXXGXGXGGXXPXXP 1202
G G G G G P
Sbjct: 398 PYHGGGGGGGGGGGGGGYTGSAAPEP 423
>07_01_0479 + 3606663-3607448
Length = 261
Score = 32.3 bits (70), Expect = 0.84
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -1
Query: 1184 PPPPXPXXGXXXXXGXXXXXXFXXGXPPXXXGXXXXPPPXGGXNPXPPP 1038
PPPP P G G PP PPP P PPP
Sbjct: 202 PPPPGPFMRGPPPMGPPQVRPGMPGGPPPGMRPGMPPPPFRPGMPPPPP 250
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 31.9 bits (69), Expect = 1.1
Identities = 24/88 (27%), Positives = 25/88 (28%), Gaps = 1/88 (1%)
Frame = +3
Query: 948 PPPPRGXXGFXFWGPXPXSPXXXXXXPXXXXGGXXVXPPPXGGXXGXPPXXGGXPXXKXX 1127
PPPP G +P P P G PP
Sbjct: 302 PPPPHPLPPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAP 361
Query: 1128 XXXGPXXGPXPXXG-XGXGGXXPXXPPP 1208
GP GP P G G GG P PPP
Sbjct: 362 RPPGPGPGPPPPPGAAGRGGGGP--PPP 387
>07_03_1140 - 24258627-24258849,24259967-24260089,24260200-24260921,
24260945-24261073,24261484-24261714
Length = 475
Score = 31.5 bits (68), Expect = 1.5
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Frame = +1
Query: 913 GGGGGXXXXXKXPPPPGGXGXXXFGXXXXXPXXXXXXXP---XXXGGGXGFXPP 1065
GGGGG PPP G G P P GGG G+ PP
Sbjct: 9 GGGGGSLWGPPQPPPSTGGGIPQLPAAAAAPVEGLLDAPFSSSSGGGGGGWPPP 62
>07_03_0559 + 19475893-19476783
Length = 296
Score = 31.1 bits (67), Expect = 1.9
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = +1
Query: 904 GXGGGGGGXXXXXKXPPPPGGXG-XXXFGXXXXXPXXXXXXXPXXXGGGXGFXPPXGGGX 1080
G GGGGGG GG G FG GGG GF GGG
Sbjct: 118 GLGGGGGGGFGGGSGGGVGGGGGQGGGFGAGGGVGGGSGTGGGLGGGGGGGFGGGGGGGI 177
Query: 1081 XXXPXXXGG 1107
GG
Sbjct: 178 GGGGGKGGG 186
>07_03_0560 + 19479597-19480667
Length = 356
Score = 30.7 bits (66), Expect = 2.6
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 1/69 (1%)
Frame = +1
Query: 904 GXGGGGGGXXXXXKXPPPPGGXGXXX-FGXXXXXPXXXXXXXPXXXGGGXGFXPPXGGGX 1080
G GGGGGG GG G FG GGG GF GGG
Sbjct: 123 GLGGGGGGGLGGGGGGGVGGGGGQGGGFGAGGGVGGGSGTGGGLGGGGGGGFGGDGGGGL 182
Query: 1081 XXXPXXXGG 1107
GG
Sbjct: 183 GGGGGKEGG 191
>03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 30.7 bits (66), Expect = 2.6
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = -3
Query: 1209 GGGGPXXXPPPXXXXXXXXXXXXXPXXXXFXXGXXPRXXGXXXXXPPXGGXKPXPPP 1039
G GGP PPP P G PR PP GG +P PPP
Sbjct: 260 GSGGPPRPPPPQVPPPPPQAPPPPPPNAPM--GMPPR-----IPPPPVGGTQPPPPP 309
>07_01_0176 - 1244704-1245102
Length = 132
Score = 29.5 bits (63), Expect = 5.9
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 904 GXGGGGGGXXXXXKXPPPPGGXGXXXFG 987
G GGGGGG PPGG G +G
Sbjct: 39 GGGGGGGGGFFEVPWFGPPGGGGWGAWG 66
>02_05_0962 +
33114226-33114684,33114806-33114853,33115166-33115286,
33115760-33116008,33116149-33116302,33116493-33116985,
33117524-33117596,33118285-33118343
Length = 551
Score = 29.5 bits (63), Expect = 5.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 904 GXGGGGGGXXXXXKXPPPP 960
G GGGGGG PPPP
Sbjct: 53 GGGGGGGGFLRLRSAPPPP 71
>04_04_1182 +
31531426-31531702,31533741-31533997,31534672-31534818,
31535974-31536111
Length = 272
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 904 GXGGGGGGXXXXXKXPPPP 960
G GGGGGG PPPP
Sbjct: 51 GGGGGGGGGMGIPPRPPPP 69
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 29.1 bits (62), Expect = 7.9
Identities = 19/68 (27%), Positives = 21/68 (30%)
Frame = +1
Query: 904 GXGGGGGGXXXXXKXPPPPGGXGXXXFGXXXXXPXXXXXXXPXXXGGGXGFXPPXGGGXX 1083
G GGG GG + G G G P GGG G+ GGG
Sbjct: 15 GRGGGRGGGGGDGRGGGYGGAGGGGVGGRGGRGPPGGGGGRGYEPGGGRGYGGGGGGGGR 74
Query: 1084 XXPXXXGG 1107
GG
Sbjct: 75 GYGGGGGG 82
>03_02_0148 - 5928703-5928931,5929099-5929171,5929288-5929408,
5929907-5929952,5930361-5930571,5930837-5930986,
5931122-5931179,5931285-5931400,5931986-5932091
Length = 369
Score = 29.1 bits (62), Expect = 7.9
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 948 PPPPRGXXGFXFWGPXPXSP 1007
PPPP G W P P SP
Sbjct: 8 PPPPAAAAGVGVWSPAPQSP 27
>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
Length = 467
Score = 29.1 bits (62), Expect = 7.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 904 GXGGGGGGXXXXXKXPPPP 960
G GGGGGG PPPP
Sbjct: 21 GGGGGGGGFSPTAAKPPPP 39
>01_01_0006 + 26221-26292,26370-26641,27090-27293,27365-27419
Length = 200
Score = 29.1 bits (62), Expect = 7.9
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 61 VLELNXVFYFVLTSFKHXTSLPHVIVWYKMVKFGKNKFKALNKLT 195
V +++ Y ++S KH T LPH Y +F K + + +LT
Sbjct: 25 VNDISLADYLAVSSTKHATYLPHTAGRYSAKRFRKAQCPLVERLT 69
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,338,179
Number of Sequences: 37544
Number of extensions: 609939
Number of successful extensions: 4787
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3880
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3969121332
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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