Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_D15
         (1233 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   3.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   3.6  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   6.2  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   6.2  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   6.2  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 312 GLKXHLKSAYPPMXLLELQKLIDXNR 389
           GL   L++AY    LLEL+K    N+
Sbjct: 2   GLPRRLRTAYTNTQLLELEKEFHFNK 27


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.4 bits (48), Expect = 3.6
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 312 GLKXHLKSAYPPMXLLELQKLIDXNR 389
           GL   L++AY    LLEL+K    N+
Sbjct: 133 GLPRRLRTAYTNTQLLELEKEFHFNK 158


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 526 SILIFAAKMSAPSSVKLTPKCFWSGFNVYNPD 431
           +IL FA+     S+      C+++ + +Y PD
Sbjct: 6   AILAFASAFMVLSASAGNVVCYFASWTIYRPD 37


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = -3

Query: 526 SILIFAAKMSAPSSVKLTPKCFWSGFNVYNPD 431
           +IL FA+     S+      C+++ + +Y PD
Sbjct: 6   AILAFASAFMVLSASAGNVVCYFASWTIYRPD 37


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 10/36 (27%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = -1

Query: 837 YLLTYHIVGHFLNLEVYIHISETILIFLE--IFFLD 736
           Y + Y  +  F+NL +     E +L+F+   +FF++
Sbjct: 115 YSINYRRISIFVNLAILGVFGEFVLVFVPDYVFFVE 150


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,722
Number of Sequences: 336
Number of extensions: 4586
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36069111
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)