Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_D15
         (1233 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0139 + 13065468-13065902,13067196-13067279,13068221-13068499     38   0.012
07_03_1192 + 24698355-24698433,24699312-24699391,24700027-247004...    31   2.5  
03_06_0678 - 35480711-35484658                                         29   9.9  

>08_02_0139 + 13065468-13065902,13067196-13067279,13068221-13068499
          Length = 265

 Score = 38.3 bits (85), Expect = 0.012
 Identities = 23/97 (23%), Positives = 42/97 (43%)
 Frame = +3

Query: 489 DGADIFAAKINIEVQWASEQVIAAIEKNGGVITTAYYDPHSLFILKNPQRFFETGQAIPR 668
           D +++   K  ++V   + +  AA+E  GG +   YY+      L  P+ F + G+ +P+
Sbjct: 162 DSSELITMK-TLKVSRTTARAKAAVEAAGGTVRLVYYNNLGFRALLKPEWFAKKGRLLPK 220

Query: 669 RMIPPPDAIEFYTSAATRGYLADPEKISQERLKLSQK 779
              PPP   +   S         P   + E L+ + K
Sbjct: 221 AARPPPKQRDKVDSIGRLPAPTKPLPFTPEELEFAAK 257


>07_03_1192 +
           24698355-24698433,24699312-24699391,24700027-24700483,
           24700641-24700794,24700878-24701155,24701225-24701517
          Length = 446

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 9/46 (19%)
 Frame = +3

Query: 612 LFILKNPQRF-FETGQAIPRRM--------IPPPDAIEFYTSAATR 722
           L   K+P+ F FE G A PRR+        +PPPDA  +  +A+TR
Sbjct: 378 LLFKKDPKSFTFEKGWAFPRRVYFNGDNCVMPPPDAYPWLPNASTR 423


>03_06_0678 - 35480711-35484658
          Length = 1315

 Score = 28.7 bits (61), Expect = 9.9
 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 2/79 (2%)
 Frame = +3

Query: 705  TSAATRGYLADPEKISQ-ERLKLSQKYGYT-LPNLESDPQYDMLTDRKDPRQIFFGLQPG 878
            T A  +  LA  E + + E L++ + Y +  +PNL +  +   +TD  D R I F  Q  
Sbjct: 1078 TQARGQSTLAPSELLPRLESLQIRRCYSFVEVPNLPTSLKLLQITDCHDLRSIIFNQQQD 1137

Query: 879  WVINLKDECILKPKDEELL 935
              + +  E   +P    L+
Sbjct: 1138 TTMLVSAESFAQPDKSSLI 1156


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,578,735
Number of Sequences: 37544
Number of extensions: 427193
Number of successful extensions: 873
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3794526552
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)