Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_D15
(1233 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000891-1|AAH00891.1| 296|Homo sapiens mitochondrial ribosomal... 241 3e-63
CR533531-1|CAG38562.1| 296|Homo sapiens MRPL15 protein. 240 8e-63
AB051619-1|BAB54947.1| 38|Homo sapiens mitochondrial ribosomal... 62 3e-09
AF110377-1|AAD04629.1| 3859|Homo sapiens PCAF-associated factor ... 32 3.7
AF076974-1|AAD09420.1| 3830|Homo sapiens TRRAP protein protein. 32 3.7
AC004991-1|AAC27675.2| 2089|Homo sapiens unknown protein. 32 3.7
D80007-1|BAA11502.1| 1884|Homo sapiens KIAA0185 protein. 31 8.6
BC080560-1|AAH80560.1| 1434|Homo sapiens PDCD11 protein protein. 31 8.6
BC064486-1|AAH64486.1| 1434|Homo sapiens PDCD11 protein protein. 31 8.6
>BC000891-1|AAH00891.1| 296|Homo sapiens mitochondrial ribosomal
protein L15 protein.
Length = 296
Score = 241 bits (591), Expect = 3e-63
Identities = 113/202 (55%), Positives = 143/202 (70%)
Frame = +3
Query: 339 YPPMXLLELQKLIDXNRVXISKPIDIASLIKSGLYTLNPDQKHFGVNLTDDGADIFAAKI 518
Y P+ L LQ LID RV S+PID+ L+ T+ P ++ +GV L ++GAD F AK+
Sbjct: 93 YKPLSLNRLQYLIDLGRVDPSQPIDLTQLVNGRGVTIQPLKRDYGVQLVEEGADTFTAKV 152
Query: 519 NIEVQWASEQVIAAIEKNGGVITTAYYDPHSLFILKNPQRFFETGQAIPRRMIPPPDAIE 698
NIEVQ ASE IAAIEKNGGV+TTA+YDP SL I+ P FF GQ IP+RM+PP + +
Sbjct: 153 NIEVQLASELAIAAIEKNGGVVTTAFYDPRSLDIVCKPVPFFLRGQPIPKRMLPPEELVP 212
Query: 699 FYTSAATRGYLADPEKISQERLKLSQKYGYTLPNLESDPQYDMLTDRKDPRQIFFGLQPG 878
+YT A RGYLADP K + RL+L++KYGY LP++ D + ML RKDPRQIFFGL PG
Sbjct: 213 YYTDAKNRGYLADPAKFPEARLELARKYGYILPDITKDELFKMLCTRKDPRQIFFGLAPG 272
Query: 879 WVINLKDECILKPKDEELLQXY 944
WV+N+ D+ ILKP DE LL+ Y
Sbjct: 273 WVVNMADKKILKPTDENLLKYY 294
>CR533531-1|CAG38562.1| 296|Homo sapiens MRPL15 protein.
Length = 296
Score = 240 bits (587), Expect = 8e-63
Identities = 113/202 (55%), Positives = 142/202 (70%)
Frame = +3
Query: 339 YPPMXLLELQKLIDXNRVXISKPIDIASLIKSGLYTLNPDQKHFGVNLTDDGADIFAAKI 518
Y PM L LQ LID RV S+PID+ L+ T+ P ++ + V L ++GAD F AK+
Sbjct: 93 YKPMSLNRLQYLIDLGRVDPSQPIDLTQLVNGRGVTIQPLKRDYDVQLVEEGADTFTAKV 152
Query: 519 NIEVQWASEQVIAAIEKNGGVITTAYYDPHSLFILKNPQRFFETGQAIPRRMIPPPDAIE 698
NIEVQ ASE IAAIEKNGGV+TTA+YDP SL I+ P FF GQ IP+RM+PP + +
Sbjct: 153 NIEVQLASELAIAAIEKNGGVVTTAFYDPRSLDIVCKPVPFFLRGQPIPKRMLPPEELVP 212
Query: 699 FYTSAATRGYLADPEKISQERLKLSQKYGYTLPNLESDPQYDMLTDRKDPRQIFFGLQPG 878
+YT A RGYLADP K + RL+L++KYGY LP++ D + ML RKDPRQIFFGL PG
Sbjct: 213 YYTDAKNRGYLADPAKFPEARLELARKYGYILPDITKDELFKMLCTRKDPRQIFFGLAPG 272
Query: 879 WVINLKDECILKPKDEELLQXY 944
WV+N+ D+ ILKP DE LL+ Y
Sbjct: 273 WVVNMADKKILKPTDENLLKYY 294
>AB051619-1|BAB54947.1| 38|Homo sapiens mitochondrial ribosomal
protein L15 protein.
Length = 38
Score = 62.5 bits (145), Expect = 3e-09
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +3
Query: 837 RKDPRQIFFGLQPGWVINLKDECILKPKDEELLQXY 944
RKDPRQIFFGL PGWV+N+ D+ ILKP DE LL+ Y
Sbjct: 1 RKDPRQIFFGLAPGWVVNMADKKILKPTDENLLKYY 36
>AF110377-1|AAD04629.1| 3859|Homo sapiens PCAF-associated factor 400
protein.
Length = 3859
Score = 32.3 bits (70), Expect = 3.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 636 RFFETGQAIPRRMIPPPDAIEFYTSAATRGYLADPEKISQE 758
R+FE Q IP +PPP+ + T+ A + +PE+ E
Sbjct: 171 RYFENPQVIPENTVPPPEMVGMITTIAVK---VNPEREDSE 208
>AF076974-1|AAD09420.1| 3830|Homo sapiens TRRAP protein protein.
Length = 3830
Score = 32.3 bits (70), Expect = 3.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 636 RFFETGQAIPRRMIPPPDAIEFYTSAATRGYLADPEKISQE 758
R+FE Q IP +PPP+ + T+ A + +PE+ E
Sbjct: 171 RYFENPQVIPENTVPPPEMVGMITTIAVK---VNPEREDSE 208
>AC004991-1|AAC27675.2| 2089|Homo sapiens unknown protein.
Length = 2089
Score = 32.3 bits (70), Expect = 3.7
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 636 RFFETGQAIPRRMIPPPDAIEFYTSAATRGYLADPEKISQE 758
R+FE Q IP +PPP+ + T+ A + +PE+ E
Sbjct: 171 RYFENPQVIPENTVPPPEMVGMITTIAVK---VNPEREDSE 208
>D80007-1|BAA11502.1| 1884|Homo sapiens KIAA0185 protein.
Length = 1884
Score = 31.1 bits (67), Expect = 8.6
Identities = 21/98 (21%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Frame = +3
Query: 504 FAAKINIEVQWASEQVIAAIEKNGGVITTAYYDPHSLFILKNPQRFFETGQAIPRRMIPP 683
F K N+ +W ++ I ++ T+ S +LK+P + F GQA+ ++ P
Sbjct: 1168 FLKKYNVVKKWLEVEIAPDIRGRIPLLLTSL----SFKVLKHPDKKFRVGQALRATVVGP 1223
Query: 684 PDAIEFYTSAATRGYLADPEKISQER-LKLSQKYGYTL 794
+ F + T + + +++ R +K++ G T+
Sbjct: 1224 DSSKTFLCLSLTGPHKLEEGEVAMGRVVKVTPNEGLTV 1261
>BC080560-1|AAH80560.1| 1434|Homo sapiens PDCD11 protein protein.
Length = 1434
Score = 31.1 bits (67), Expect = 8.6
Identities = 21/98 (21%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Frame = +3
Query: 504 FAAKINIEVQWASEQVIAAIEKNGGVITTAYYDPHSLFILKNPQRFFETGQAIPRRMIPP 683
F K N+ +W ++ I ++ T+ S +LK+P + F GQA+ ++ P
Sbjct: 1155 FLKKYNVVKKWLEVEIAPDIRGRIPLLLTSL----SFKVLKHPDKKFRVGQALRATVVGP 1210
Query: 684 PDAIEFYTSAATRGYLADPEKISQER-LKLSQKYGYTL 794
+ F + T + + +++ R +K++ G T+
Sbjct: 1211 DSSKTFLCLSLTGPHKLEEGEVAMGRVVKVTPNEGLTV 1248
>BC064486-1|AAH64486.1| 1434|Homo sapiens PDCD11 protein protein.
Length = 1434
Score = 31.1 bits (67), Expect = 8.6
Identities = 21/98 (21%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Frame = +3
Query: 504 FAAKINIEVQWASEQVIAAIEKNGGVITTAYYDPHSLFILKNPQRFFETGQAIPRRMIPP 683
F K N+ +W ++ I ++ T+ S +LK+P + F GQA+ ++ P
Sbjct: 1155 FLKKYNVVKKWLEVEIAPDIRGRIPLLLTSL----SFKVLKHPDKKFRVGQALRATVVGP 1210
Query: 684 PDAIEFYTSAATRGYLADPEKISQER-LKLSQKYGYTL 794
+ F + T + + +++ R +K++ G T+
Sbjct: 1211 DSSKTFLCLSLTGPHKLEEGEVAMGRVVKVTPNEGLTV 1248
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,141,520
Number of Sequences: 237096
Number of extensions: 2564673
Number of successful extensions: 3941
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3941
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17504701140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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