Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_D15
         (1233 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC087232-7|AAK09082.1|  298|Caenorhabditis elegans Hypothetical ...   151   1e-36
Z81097-12|CAD56590.1|  457|Caenorhabditis elegans Hypothetical p...    30   3.9  
Z81097-11|CAB03170.2|  485|Caenorhabditis elegans Hypothetical p...    30   3.9  
AF040661-7|AAG24223.1|  439|Caenorhabditis elegans Hypothetical ...    29   5.1  

>AC087232-7|AAK09082.1|  298|Caenorhabditis elegans Hypothetical
           protein Y92H12BR.8 protein.
          Length = 298

 Score =  151 bits (365), Expect = 1e-36
 Identities = 78/196 (39%), Positives = 116/196 (59%)
 Frame = +3

Query: 339 YPPMXLLELQKLIDXNRVXISKPIDIASLIKSGLYTLNPDQKHFGVNLTDDGADIFAAKI 518
           Y P+ L+EL +LID   +   +PIDI++L  +  + +NP  + +G +LT++GAD F   I
Sbjct: 93  YIPLSLVELARLIDLGWINPRQPIDISTLCTTQKFQINPKMRQYGFDLTEEGADSFPYSI 152

Query: 519 NIEVQWASEQVIAAIEKNGGVITTAYYDPHSLFILKNPQRFFETGQAIPRRMIPPPDAIE 698
           +IEVQ+A+   IAA+EK GG + TAYYD  SL    NP+ +FE G+ +P+R  PP   +E
Sbjct: 153 DIEVQYATPSAIAAVEKAGGRVRTAYYDVESLEAAINPKCWFEAGKVVPKRKQPPQSLLE 212

Query: 699 FYTSAATRGYLADPEKISQERLKLSQKYGYTLPNLESDPQYDMLTDRKDPRQIFFGLQPG 878
           +Y  A  RGYL + ++I +ER   +Q  GYTLP   S          K   Q+F G+  G
Sbjct: 213 YYMDAKNRGYLCEEQEIEKERALSAQIRGYTLPPPPSSAAL------KAVDQVFHGIPSG 266

Query: 879 WVINLKDECILKPKDE 926
            V++L D  +   K+E
Sbjct: 267 SVVSLADRKVFVTKNE 282


>Z81097-12|CAD56590.1|  457|Caenorhabditis elegans Hypothetical
           protein K07A1.9b protein.
          Length = 457

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = -3

Query: 505 KMSAPSSVKLTPKCFWSGFNVYNPDFIKLAISMGLDM----XTRXLSINFCNSKSXIGGY 338
           K+ A   V + PKCF + +  YNP++  L++     +     T+ L   + N K    GY
Sbjct: 280 KLIAVCVVDILPKCFSAKYMYYNPEYSFLSLGTYTALREIEQTQRLHAIYSNLKYYYMGY 339

Query: 337 ALFKC 323
            +  C
Sbjct: 340 YIHSC 344


>Z81097-11|CAB03170.2|  485|Caenorhabditis elegans Hypothetical
           protein K07A1.9a protein.
          Length = 485

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
 Frame = -3

Query: 505 KMSAPSSVKLTPKCFWSGFNVYNPDFIKLAISMGLDM----XTRXLSINFCNSKSXIGGY 338
           K+ A   V + PKCF + +  YNP++  L++     +     T+ L   + N K    GY
Sbjct: 308 KLIAVCVVDILPKCFSAKYMYYNPEYSFLSLGTYTALREIEQTQRLHAIYSNLKYYYMGY 367

Query: 337 ALFKC 323
            +  C
Sbjct: 368 YIHSC 372


>AF040661-7|AAG24223.1|  439|Caenorhabditis elegans Hypothetical
           protein W10G11.17 protein.
          Length = 439

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 2/99 (2%)
 Frame = +3

Query: 312 GLKXHLKSAYPPMXLLELQKLIDXNRVXISKPIDIASLIKSGLYTLNPDQKHFGVNLTDD 491
           GL   L  AY  + L+  +   +  R    +  + ASLI  G+ + +P  + F   L  D
Sbjct: 74  GLNPELLVAYKAVGLVYREICGNHGRTLWYRTREDASLI--GVDSFSPICEPFKEQLNPD 131

Query: 492 GADI--FAAKINIEVQWASEQVIAAIEKNGGVITTAYYD 602
            + +   A K+NI +Q  +E    A+ + GG  TT+  D
Sbjct: 132 ESTLSQLALKLNILIQNVTEGFEPALRRGGGGNTTSTED 170


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,574,562
Number of Sequences: 27780
Number of extensions: 399401
Number of successful extensions: 830
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3412067766
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)