Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_D13
         (1303 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.22 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   2.1  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    26   2.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   8.5  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.5 bits (63), Expect = 0.22
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = -2

Query: 477 PXXPXPXAXPXSPXXSPXXXPXPXPPPPPXLXP 379
           P  P     P      P   P P PPPPP + P
Sbjct: 561 PLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGP 593



 Score = 25.0 bits (52), Expect = 4.8
 Identities = 11/26 (42%), Positives = 11/26 (42%), Gaps = 2/26 (7%)
 Frame = -2

Query: 462 PXAXPXSPXXSPXXXPXPXPP--PPP 391
           P   P  P   P   P P PP  PPP
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPPP 595



 Score = 24.6 bits (51), Expect = 6.4
 Identities = 13/30 (43%), Positives = 13/30 (43%)
 Frame = +3

Query: 474 GXPQXXPPPPPPPXXXXG*XPPXGXXXPPP 563
           G P   PPPPPP        PP     PPP
Sbjct: 525 GGPLGPPPPPPPGGAVLN-IPP--QFLPPP 551



 Score = 24.6 bits (51), Expect = 6.4
 Identities = 12/31 (38%), Positives = 12/31 (38%)
 Frame = +3

Query: 480 PQXXPPPPPPPXXXXG*XPPXGXXXPPPKXG 572
           P   PPP PPP    G  PP       P  G
Sbjct: 577 PNAQPPPAPPPPPPMG--PPPSPLAGGPLGG 605


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -2

Query: 444 SPXXSPXXXPXPXPPPPPXLXPTXLSP 364
           SP  S        PPPPP   P+ LSP
Sbjct: 770 SPSRSAFADGIGSPPPPPPPPPSSLSP 796



 Score = 24.2 bits (50), Expect = 8.5
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +3

Query: 474 GXPQXXPPPPPPP 512
           G     PPPPPPP
Sbjct: 779 GIGSPPPPPPPPP 791


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +2

Query: 395 GGGGXGXGXXXGEXXGXXGXAXGXGXXGP 481
           GGGG G G   G      G   G G  GP
Sbjct: 517 GGGGGGSGCVNGSRTVGAGGMAGGGSDGP 545


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 8.5
 Identities = 11/26 (42%), Positives = 11/26 (42%)
 Frame = +1

Query: 829 GAXXXXKRGXXPXXGGGXXXXPGGGG 906
           GA      G  P  GGG    PG GG
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGG 226


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.309    0.143    0.477 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,404
Number of Sequences: 2352
Number of extensions: 8225
Number of successful extensions: 39
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 150010149
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)