Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_D11
(1276 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49127-1|CAA88944.1| 333|Caenorhabditis elegans Hypothetical pr... 285 6e-77
U15420-1|AAA67063.1| 333|Caenorhabditis elegans lactate dehydro... 285 6e-77
L43563-1|AAC41613.1| 333|Caenorhabditis elegans L-lactate dehyd... 285 6e-77
Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z92834-12|CAB07392.5| 424|Caenorhabditis elegans Hypothetical p... 30 3.1
Z81569-2|CAB04602.4| 424|Caenorhabditis elegans Hypothetical pr... 30 3.1
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 30 4.0
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 30 4.0
Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical pr... 29 7.0
>Z49127-1|CAA88944.1| 333|Caenorhabditis elegans Hypothetical protein
F13D12.2 protein.
Length = 333
Score = 285 bits (698), Expect = 6e-77
Identities = 130/223 (58%), Positives = 170/223 (76%)
Frame = +3
Query: 399 KQLFQPVHAQVDATWSKVXIXXXXXXXXXXXFSMLTQNVTNNIALVXMMANKLKGEMMDL 578
K++F + A V+ + KV + +S+L QN+ N + LV ++A+KLKGEMMDL
Sbjct: 6 KEVFAEIAAPVENSHGKVTVVGVGQVGMACAYSILQQNLANELCLVDVVADKLKGEMMDL 65
Query: 579 QHGSAFMXNAKIQSSTDYSITAGSKICVVTAGVRQREGESRLDLVQRNTDVLKQIIPQLI 758
QHG AF + +++ TDYSITAGSK+CVVTAG RQREGE+RL LVQRN ++ K IIPQL+
Sbjct: 66 QHGLAFTRHCTVKADTDYSITAGSKLCVVTAGARQREGETRLSLVQRNVEIFKGIIPQLV 125
Query: 759 KYSPDTILVIASDPVDILTYVTWKISGLPKHRVIGSGTDLDSARFRYLLSDRLGIATTSC 938
KYSPDT +++ S+PVD+LTYVTWK+SGLP+ RV GSGT+LDSARFR+LLS++L IA +SC
Sbjct: 126 KYSPDTCILVVSNPVDVLTYVTWKLSGLPRERVFGSGTNLDSARFRFLLSEKLNIAPSSC 185
Query: 939 HGYIIGEHGXSSVPVWSAVNIAGVRLXDLXNXIGTXXDPENWK 1067
HG+IIGEHG SSV VWS VN+AGV L ++ IG D E+W+
Sbjct: 186 HGWIIGEHGDSSVAVWSGVNVAGVTLHEIKPDIGEKTDNEHWE 228
>U15420-1|AAA67063.1| 333|Caenorhabditis elegans lactate
dehydrogenase protein.
Length = 333
Score = 285 bits (698), Expect = 6e-77
Identities = 130/223 (58%), Positives = 170/223 (76%)
Frame = +3
Query: 399 KQLFQPVHAQVDATWSKVXIXXXXXXXXXXXFSMLTQNVTNNIALVXMMANKLKGEMMDL 578
K++F + A V+ + KV + +S+L QN+ N + LV ++A+KLKGEMMDL
Sbjct: 6 KEVFAEIAAPVENSHGKVTVVGVGQVGMACAYSILQQNLANELCLVDVVADKLKGEMMDL 65
Query: 579 QHGSAFMXNAKIQSSTDYSITAGSKICVVTAGVRQREGESRLDLVQRNTDVLKQIIPQLI 758
QHG AF + +++ TDYSITAGSK+CVVTAG RQREGE+RL LVQRN ++ K IIPQL+
Sbjct: 66 QHGLAFTRHCTVKADTDYSITAGSKLCVVTAGARQREGETRLSLVQRNVEIFKGIIPQLV 125
Query: 759 KYSPDTILVIASDPVDILTYVTWKISGLPKHRVIGSGTDLDSARFRYLLSDRLGIATTSC 938
KYSPDT +++ S+PVD+LTYVTWK+SGLP+ RV GSGT+LDSARFR+LLS++L IA +SC
Sbjct: 126 KYSPDTCILVVSNPVDVLTYVTWKLSGLPRERVFGSGTNLDSARFRFLLSEKLNIAPSSC 185
Query: 939 HGYIIGEHGXSSVPVWSAVNIAGVRLXDLXNXIGTXXDPENWK 1067
HG+IIGEHG SSV VWS VN+AGV L ++ IG D E+W+
Sbjct: 186 HGWIIGEHGDSSVAVWSGVNVAGVTLHEIKPDIGEKTDNEHWE 228
>L43563-1|AAC41613.1| 333|Caenorhabditis elegans L-lactate
dehydrogenase protein.
Length = 333
Score = 285 bits (698), Expect = 6e-77
Identities = 130/223 (58%), Positives = 170/223 (76%)
Frame = +3
Query: 399 KQLFQPVHAQVDATWSKVXIXXXXXXXXXXXFSMLTQNVTNNIALVXMMANKLKGEMMDL 578
K++F + A V+ + KV + +S+L QN+ N + LV ++A+KLKGEMMDL
Sbjct: 6 KEVFAEIAAPVENSHGKVTVVGVGQVGMACAYSILQQNLANELCLVDVVADKLKGEMMDL 65
Query: 579 QHGSAFMXNAKIQSSTDYSITAGSKICVVTAGVRQREGESRLDLVQRNTDVLKQIIPQLI 758
QHG AF + +++ TDYSITAGSK+CVVTAG RQREGE+RL LVQRN ++ K IIPQL+
Sbjct: 66 QHGLAFTRHCTVKADTDYSITAGSKLCVVTAGARQREGETRLSLVQRNVEIFKGIIPQLV 125
Query: 759 KYSPDTILVIASDPVDILTYVTWKISGLPKHRVIGSGTDLDSARFRYLLSDRLGIATTSC 938
KYSPDT +++ S+PVD+LTYVTWK+SGLP+ RV GSGT+LDSARFR+LLS++L IA +SC
Sbjct: 126 KYSPDTCILVVSNPVDVLTYVTWKLSGLPRERVFGSGTNLDSARFRFLLSEKLNIAPSSC 185
Query: 939 HGYIIGEHGXSSVPVWSAVNIAGVRLXDLXNXIGTXXDPENWK 1067
HG+IIGEHG SSV VWS VN+AGV L ++ IG D E+W+
Sbjct: 186 HGWIIGEHGDSSVAVWSGVNVAGVTLHEIKPDIGEKTDNEHWE 228
>Z70204-3|CAA94113.1| 385|Caenorhabditis elegans Hypothetical
protein C11G6.3 protein.
Length = 385
Score = 31.5 bits (68), Expect = 1.3
Identities = 23/97 (23%), Positives = 38/97 (39%)
Frame = -1
Query: 346 RQRKDDXRLXAVNRRXQQMSNLKEIRGSXXHEERXGTDPARXGVA*EESENKTDTNRKQN 167
RQ+K+ R A R ++ + + R + EER R ++ E + R +
Sbjct: 156 RQQKEKEREDAARREIEEKAEMDAKRVAEEEEERRKEKEKRREEKKKQKELLKEKERSER 215
Query: 166 SEKEPVXHXKXEXKDRXRXRXSQTTCTRENVHSKRND 56
EKE + E K R + R + RE K +
Sbjct: 216 KEKERELEREKE-KSREKEREKEREKEREKEREKERE 251
>Z92834-12|CAB07392.5| 424|Caenorhabditis elegans Hypothetical
protein K11B4.1 protein.
Length = 424
Score = 30.3 bits (65), Expect = 3.1
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +3
Query: 741 IIPQLIKYSPDTILVIASDPVD 806
I+ L+KY P+TI+ +A+DP++
Sbjct: 112 IVRLLLKYQPETIITLANDPIN 133
>Z81569-2|CAB04602.4| 424|Caenorhabditis elegans Hypothetical
protein K11B4.1 protein.
Length = 424
Score = 30.3 bits (65), Expect = 3.1
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +3
Query: 741 IIPQLIKYSPDTILVIASDPVD 806
I+ L+KY P+TI+ +A+DP++
Sbjct: 112 IVRLLLKYQPETIITLANDPIN 133
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -1
Query: 208 EESENKTDTNRKQNSEKEPVXHXKXEXKDRXRXRXSQTT 92
+E E K D +K+ EK+ K E KD+ + +Q T
Sbjct: 80 KEEEKKADDEKKKTEEKDDKKSKKTEEKDKLSVKKTQET 118
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -1
Query: 208 EESENKTDTNRKQNSEKEPVXHXKXEXKDRXRXRXSQTT 92
+E E K D +K+ EK+ K E KD+ + +Q T
Sbjct: 74 KEEEKKADDEKKKTEEKDDKKSKKTEEKDKISVKKTQET 112
>Z71181-6|CAA94899.1| 647|Caenorhabditis elegans Hypothetical
protein K07C5.6 protein.
Length = 647
Score = 29.1 bits (62), Expect = 7.0
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 2/80 (2%)
Frame = -1
Query: 280 KEIRGSXXHEERXGTDPARXGVA*EESENKTDTNRKQNSEK--EPVXHXKXEXKDRXRXR 107
K + + EE+ D + VA E S+N D +++ SEK P E K++ R +
Sbjct: 459 KLVEKTEVKEEKEKEDSIKDEVAEENSDNDNDEEKEKVSEKSISPSPPSDDEEKEKEREK 518
Query: 106 XSQTTCTRENVHSKRNDGAR 47
R +R D R
Sbjct: 519 ERLIEKERRERDQRRRDKKR 538
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,335,132
Number of Sequences: 27780
Number of extensions: 376799
Number of successful extensions: 1058
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3558150178
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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