Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_D10
         (1230 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0717 - 31446860-31447074,31447183-31447270,31448909-314490...   132   4e-31
05_03_0012 - 7355493-7355645,7356309-7356370,7356885-7356972,735...    77   4e-14
09_04_0464 + 17820164-17820181,17820972-17821065,17821251-178214...    29   7.5  

>01_06_0717 - 31446860-31447074,31447183-31447270,31448909-31449012,
            31449618-31449745,31450461-31450555,31461823-31463115,
            31463188-31464039,31464568-31464621
          Length = 942

 Score =  132 bits (320), Expect = 4e-31
 Identities = 65/127 (51%), Positives = 81/127 (63%)
 Frame = +2

Query: 176  TLFXGADKNANAALIKWGWPAAVWFHVXKVSSAHVSLSLTPGQTLDAXPNLVLXAACQLV 355
            T++ GADKN N  LIK+G P  VWFHV KVSSAHV L L  G+++D+  + +L    QLV
Sbjct: 742  TIYMGADKNENEELIKYGLPEDVWFHVDKVSSAHVYLRLKKGESIDSICDGLLEDCAQLV 801

Query: 356  KANSILGNKMXXIAIVYTMWSNLKQPAGMEVGQVAFHKARXXXXXXXXXXXXXIVNRLNK 535
            KA+SI GNKM  + +VYT WSNLK+   M+VGQV FH  R             I+NRLNK
Sbjct: 802  KAHSIQGNKMNNVEVVYTPWSNLKKSPSMDVGQVGFHNTRMVRVVIVEKRVNEIINRLNK 861

Query: 536  TKTESFP 556
            T+ E  P
Sbjct: 862  TRVERRP 868


>05_03_0012 -
           7355493-7355645,7356309-7356370,7356885-7356972,
           7357677-7357780,7357931-7358010,7359127-7359183,
           7359924-7360036
          Length = 218

 Score = 76.6 bits (180), Expect = 4e-14
 Identities = 58/156 (37%), Positives = 70/156 (44%), Gaps = 19/156 (12%)
 Frame = +2

Query: 146 FQVVLSLPQXTLFXGADKNANAALIKWGWPAAV------------W-------FHVXKVS 268
           F+V       T+F G DK  N  LIK+G+P  +            W       FHV K+S
Sbjct: 5   FKVRPEAGDYTIFMGLDKFENEDLIKYGFPEDICWLQIIGSVVHAWAIMIRKMFHVDKMS 64

Query: 269 SAHVSLSLTPGQTLDAXPNLVLXAACQLVKANSILGNKMXXIAIVYTMWSNLKQPAGMEV 448
           SAHV L L  GQT+D                    GNK   I +VYT W NLK+   M+V
Sbjct: 65  SAHVYLRLNKGQTMDDISE----------------GNKTNNIDVVYTPWYNLKKTPSMDV 108

Query: 449 GQVAFHKARXXXXXXXXXXXXXIVNRLNKTKTESFP 556
           GQV FH ++             IVNRLNKTK E  P
Sbjct: 109 GQVGFHNSKLVRIVKVEKRINEIVNRLNKTKVERKP 144


>09_04_0464 +
           17820164-17820181,17820972-17821065,17821251-17821429,
           17821959-17822009,17822683-17822739,17822854-17822974,
           17823187-17823253,17823342-17823383,17823629-17823734,
           17823864-17823974,17824248-17824319,17824423-17824524,
           17824597-17824758,17824961-17825119
          Length = 446

 Score = 29.1 bits (62), Expect = 7.5
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 961 FVXXFVNEVYPNGQYPTWVVNSLSSVGINL 872
           FV  F+   +P G  P WV N++   GI++
Sbjct: 386 FVRGFLRMQFPKGDVPKWVRNAMVVAGIDI 415


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,123,860
Number of Sequences: 37544
Number of extensions: 320599
Number of successful extensions: 511
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3782886900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)