Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_D10
         (1230 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL034488-2|CAA22448.1|  210|Caenorhabditis elegans Hypothetical ...   131   1e-30
Z46937-7|CAH10806.1|  109|Caenorhabditis elegans Hypothetical pr...    93   3e-19

>AL034488-2|CAA22448.1|  210|Caenorhabditis elegans Hypothetical
           protein Y54G11A.2 protein.
          Length = 210

 Score =  131 bits (316), Expect = 1e-30
 Identities = 64/125 (51%), Positives = 76/125 (60%)
 Frame = +2

Query: 167 PQXTLFXGADKNANAALIKWGWPAAVWFHVXKVSSAHVSLSLTPGQTLDAXPNLVLXAAC 346
           P   ++ G DK  N  LIK+GWP  VWFHV K+SSAHV L L  G T+D+ P  +L   C
Sbjct: 12  PPTMIYMGVDKVENEDLIKYGWPEDVWFHVDKLSSAHVYLRLHSGMTIDSIPEALLIDCC 71

Query: 347 QLVKANSILGNKMXXIAIVYTMWSNLKQPAGMEVGQVAFHKARXXXXXXXXXXXXXIVNR 526
           QLVK NSI G K+  +AIVYTMWSNLK+   M VGQV FH  +             IVNR
Sbjct: 72  QLVKQNSIEGCKLNNVAIVYTMWSNLKKTGDMAVGQVGFHSHKQVKHTVVPTKINEIVNR 131

Query: 527 LNKTK 541
           L KT+
Sbjct: 132 LEKTR 136


>Z46937-7|CAH10806.1|  109|Caenorhabditis elegans Hypothetical
           protein F43C1.7 protein.
          Length = 109

 Score = 93.5 bits (222), Expect = 3e-19
 Identities = 47/98 (47%), Positives = 58/98 (59%)
 Frame = +2

Query: 167 PQXTLFXGADKNANAALIKWGWPAAVWFHVXKVSSAHVSLSLTPGQTLDAXPNLVLXAAC 346
           P   +F G  +  N  L K G P  VWFHV KVSSAHV L L  G T+D  P  +L   C
Sbjct: 12  PPALIFMGEHQVENEKLFKCGDPGDVWFHVDKVSSAHVYLQLPSGITIDTIPEELLEECC 71

Query: 347 QLVKANSILGNKMXXIAIVYTMWSNLKQPAGMEVGQVA 460
           QLVK NSI G KM  + + YT+  NLK+  GM+ G+V+
Sbjct: 72  QLVKKNSIQGVKMEKVEVNYTLKENLKKVKGMQTGEVS 109


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,597,078
Number of Sequences: 27780
Number of extensions: 294058
Number of successful extensions: 544
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 544
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3401633308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)