Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_D08
(1227 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0067 + 13144002-13144203,13144471-13144529,13144638-131447... 40 0.005
06_03_0019 + 15506702-15506896,15507741-15507875,15508264-155085... 34 0.26
03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484 33 0.35
01_01_0044 - 326337-326500,326618-327398 33 0.35
06_03_0796 - 24690115-24690247,24690622-24690808,24691060-246912... 32 0.80
01_01_0043 - 321810-321973,322054-322846 32 0.80
02_05_1294 + 35525704-35525975,35527647-35527717,35527817-355280... 32 1.1
08_01_0527 + 4580599-4580818,4580933-4581806,4581891-4581955,458... 31 1.9
05_06_0250 - 26682207-26683811 31 1.9
03_02_0550 + 9407280-9407375,9407474-9407560,9408230-9408317,940... 31 2.4
08_02_0969 - 23126389-23126670,23126764-23126947,23127017-231278... 30 3.2
03_06_0538 + 34591897-34593703,34595436-34595506,34596328-34598775 30 3.2
01_01_1112 + 8808544-8808695,8808818-8808961,8809302-8809380,880... 30 3.2
12_01_0947 - 9396320-9396483,9396822-9397025,9397769-9398009,939... 29 5.7
12_01_0941 - 9316051-9316056,9316747-9317082 29 5.7
12_01_0935 - 9277421-9277584,9277908-9278111,9280742-9280982,928... 29 5.7
12_02_0352 - 17862577-17863528,17864076-17864827 29 7.5
05_04_0020 - 17199627-17199947,17200129-17200203,17200301-172003... 29 7.5
01_03_0042 - 11893004-11893645 29 7.5
11_05_0100 - 19056465-19056470,19057043-19057276,19058391-190585... 29 9.9
03_02_0573 - 9571040-9571234,9571352-9571444,9571735-9571818,957... 29 9.9
>12_02_0067 + 13144002-13144203,13144471-13144529,13144638-13144713,
13144802-13144873,13144969-13145056,13145365-13145601,
13145705-13145910,13145946-13146122,13146220-13146251,
13146330-13146432,13146547-13146815,13148029-13148175,
13148272-13148412,13148509-13148595,13148841-13148931,
13149093-13149192,13149292-13149352,13149442-13149663,
13149756-13149872,13149972-13150061,13150168-13150344
Length = 917
Score = 39.5 bits (88), Expect = 0.005
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Frame = +1
Query: 457 SSGQMCSNDK-PQKEDCSIDPWTIEGRMKSKVEQE-LKNMEDLNYTIIRPAIVYGIGDRR 630
S+G +D P E ++DP + R K K+E E L D+N+T IRP +YG +
Sbjct: 702 SAGVYLKSDLLPHFETDAVDP---KSRHKGKLETESLLETRDVNWTSIRPVYIYGPLNYN 758
Query: 631 SLTPRLLYGGIYKHLGETMKLLWTGDLKMNTVHVRDVCRAIWTLGTSPQANKQIYNL 801
+ + G + + G+ HV+D+ A +P+A+KQ++N+
Sbjct: 759 PVEEWFFH---RLKAGRPIPVPGAGNQITQLGHVKDLATAFVLALGNPKASKQVFNI 812
>06_03_0019 +
15506702-15506896,15507741-15507875,15508264-15508501,
15508652-15508855,15508945-15509111
Length = 312
Score = 33.9 bits (74), Expect = 0.26
Identities = 22/75 (29%), Positives = 33/75 (44%)
Frame = +1
Query: 85 RVLILGGCGFIGRNLVXYLIRNDLVSGLRVVDKXPPQLAFLNPTHSKTFEDPRVEYKSAN 264
RVL++GG G+IGR +V R D ++ + V D P A + F D +
Sbjct: 10 RVLVIGGTGYIGRYIVAASAREDHLTSVLVRDPAPADPA--KAAVLQGFRDSGATLVKGD 67
Query: 265 LINQTSCASALDPGD 309
L S +A+ D
Sbjct: 68 LYGHQSLVAAIKSAD 82
>03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484
Length = 663
Score = 33.5 bits (73), Expect = 0.35
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +1
Query: 88 VLILGGCGFIGRNLVXYLIRNDLVSGLRVVDKXP--PQLAFLNPTH-SKTFEDPRVEYKS 258
+LI G GFI ++ L+RN + V+DK L+ LNP+ S F+ + + S
Sbjct: 9 ILITGAAGFIASHVANRLVRNYPHYKIVVLDKLDYCSSLSNLNPSRPSPNFKFVKGDIAS 68
Query: 259 ANLINQTSCASALD 300
A+L+N ++D
Sbjct: 69 ADLVNYLLTTESID 82
>01_01_0044 - 326337-326500,326618-327398
Length = 314
Score = 33.5 bits (73), Expect = 0.35
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +1
Query: 67 GDHLKPRVLILGGCGFIGRNLVXYLIRNDLVSGLRVVDKXPPQLAFLNPTHSKTFEDPRV 246
G+ K R+L++GG G+IGR++V R + V D P A ++F D V
Sbjct: 5 GEEKKSRILVVGGTGYIGRHVVLASARLGHPTTALVRDLSPSDPA--KSQLLQSFRDAGV 62
Query: 247 EYKSANLINQTSCASALDPGD 309
+L + S SA+ D
Sbjct: 63 TLLHGDLYDHASLLSAVRDAD 83
>06_03_0796 -
24690115-24690247,24690622-24690808,24691060-24691222,
24691503-24691688,24692005-24692174,24692648-24692774
Length = 321
Score = 32.3 bits (70), Expect = 0.80
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +1
Query: 235 DPRVEYKSANLINQTSCASALDPGDDAPWGLVVNCASETRGGQTEAVYAEGIVTLSLNVA 414
+ R++ A+L++ S ASA+ G + + V + R E VT +LNV
Sbjct: 57 EERLQLLKADLLDYDSVASAV-AGCEGVFH-VASPVPSGRSTNPEVEVIAPAVTGTLNVL 114
Query: 415 KHCARMKVPRLVEISS-GQMCSNDK-PQKEDCSIDPWTIE 528
K C KV R+V +SS + SN P+ + + D W+ E
Sbjct: 115 KACHEAKVKRVVMVSSIAAVFSNPNWPKDKAFTEDSWSDE 154
>01_01_0043 - 321810-321973,322054-322846
Length = 318
Score = 32.3 bits (70), Expect = 0.80
Identities = 24/77 (31%), Positives = 34/77 (44%)
Frame = +1
Query: 79 KPRVLILGGCGFIGRNLVXYLIRNDLVSGLRVVDKXPPQLAFLNPTHSKTFEDPRVEYKS 258
K R+L++GG G+IGR++V R + V D P A H TF D V
Sbjct: 11 KSRILVVGGTGYIGRHVVAASARLGHPTTALVRDLAPSDPAKAQLLH--TFRDAGVTLLH 68
Query: 259 ANLINQTSCASALDPGD 309
+L + S A+ D
Sbjct: 69 GDLHDHASLLRAVRDAD 85
>02_05_1294 +
35525704-35525975,35527647-35527717,35527817-35528004,
35528153-35528276,35528423-35528553,35529009-35529132,
35529753-35529844,35529895-35529936,35530036-35530071
Length = 359
Score = 31.9 bits (69), Expect = 1.1
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 5/155 (3%)
Frame = +1
Query: 493 KEDCSIDPWTIEGRMKSKVEQELKNMEDL-NYTIIRPAIVYGIGDRRSLTPRLLYGGIYK 669
KED P + G KSKV E +E NY I+R +I+YG + L +
Sbjct: 124 KEDDETLPVNMYG--KSKVAAEKFIIEQCSNYAILRSSIIYGPQTISPVAKSLPIQWMDS 181
Query: 670 HLGETMKLLWTGDLKMNTVHVRDVCRAIWTLGTSPQAN-KQIYNLVDEGNSTQGT---LA 837
L + ++ + D V+V+D+ + +L S A+ K + L++ G + + +A
Sbjct: 182 VLSQGQQVQFFNDEFRCPVYVKDMVDVVLSLTKSWLADGKAVQVLLNVGGPDRVSRLQMA 241
Query: 838 ELVSDIFKINHDYYGTAISTLAKNDIASVAEEAND 942
E V+D+ +H + ++ +AS + + D
Sbjct: 242 ESVADVRGYSHSIIKSVSASSVDRGVASPPDISMD 276
>08_01_0527 +
4580599-4580818,4580933-4581806,4581891-4581955,
4582055-4582110,4582955-4583058,4583310-4583382,
4583474-4583654,4584537-4584622
Length = 552
Score = 31.1 bits (67), Expect = 1.9
Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +3
Query: 369 GGLCGRNRH---PQPERGQALRQDEGTKTGRDLKWTDVQQ**APKGRLLN*PLDDRRSDE 539
GGL GR R P PERG A R+D R + T G+ L+ P RR +
Sbjct: 122 GGLTGRRRRNDTPSPERGGAGRKDLSPPRRRQRQDTPSPDPRDAAGKDLSPPRQRRRRQD 181
Query: 540 EQSGTRAEKHGG 575
S +E GG
Sbjct: 182 TPSPKGSEVAGG 193
>05_06_0250 - 26682207-26683811
Length = 534
Score = 31.1 bits (67), Expect = 1.9
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -3
Query: 463 HLRSLPVLVPSSWRSAWPR 407
+LR L V+VPSSW +WPR
Sbjct: 397 NLRKLVVVVPSSWDVSWPR 415
>03_02_0550 +
9407280-9407375,9407474-9407560,9408230-9408317,
9408871-9408962,9409068-9409132,9409220-9409308,
9409402-9409479,9409567-9409660,9409745-9409811,
9409907-9409970,9410096-9410136,9410221-9410412
Length = 350
Score = 30.7 bits (66), Expect = 2.4
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 85 RVLILGGCGFIGRNLVXYLIRND 153
R+L+ GG GFIG +LV L+ N+
Sbjct: 36 RILVTGGAGFIGSHLVDKLMENE 58
>08_02_0969 -
23126389-23126670,23126764-23126947,23127017-23127834,
23127953-23128642
Length = 657
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 348 NSRRSDRGGLCGRNRHPQPERGQALRQDEGTKTGRDLKWTDV 473
++RR DR G N HP +RG+ R+DE RD D+
Sbjct: 302 DARRRDRKGKYN-NDHPDADRGRGWRRDEHDDEDRDNAGRDI 342
>03_06_0538 + 34591897-34593703,34595436-34595506,34596328-34598775
Length = 1441
Score = 30.3 bits (65), Expect = 3.2
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +2
Query: 761 SGPVLRPTSRSITWLTKGTALRVHWPSSSLIYSKSI 868
S PV+RP +S+ + +G A+ VH P YS+S+
Sbjct: 1406 SEPVMRPAMKSVALMIEG-AIEVHQPPPPASYSQSL 1440
>01_01_1112 +
8808544-8808695,8808818-8808961,8809302-8809380,
8809477-8809555,8810338-8810377,8810455-8810589,
8810901-8811038,8811596-8811881
Length = 350
Score = 30.3 bits (65), Expect = 3.2
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 5/130 (3%)
Frame = +1
Query: 496 EDCSIDPWTIEGRMKSKVEQELKNMED---LNYTIIRPAIVYGIGDRRSLTPRLLYGGIY 666
ED +++P T +++ E+ N+ D L+ + R +YG G RS +
Sbjct: 164 EDHTVNPKTESVKLRYAAEKGWLNVIDDLDLSAFVFRLGGIYGPG--RSAVDTIAKS--- 218
Query: 667 KHLGETMKLLWTGDLKMNT--VHVRDVCRAIWTLGTSPQANKQIYNLVDEGNSTQGTLAE 840
K L K + + K T +HV D+C+AI S ++ ++IYN+VD+ + + +
Sbjct: 219 KSLSRRQK---SRESKQYTARIHVADICQAI-LASMSIRSARRIYNVVDDDPAPRSEVFA 274
Query: 841 LVSDIFKINH 870
+ + H
Sbjct: 275 FARSLVERKH 284
>12_01_0947 -
9396320-9396483,9396822-9397025,9397769-9398009,
9399052-9399387
Length = 314
Score = 29.5 bits (63), Expect = 5.7
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +1
Query: 79 KPRVLILGGCGFIGRNLV 132
K RVL++GG GF+GR +V
Sbjct: 5 KSRVLVVGGTGFVGRRVV 22
>12_01_0941 - 9316051-9316056,9316747-9317082
Length = 113
Score = 29.5 bits (63), Expect = 5.7
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +1
Query: 79 KPRVLILGGCGFIGRNLV 132
K RVLI+GG G+IGR +V
Sbjct: 5 KSRVLIVGGSGYIGRRIV 22
>12_01_0935 -
9277421-9277584,9277908-9278111,9280742-9280982,
9282165-9282494
Length = 312
Score = 29.5 bits (63), Expect = 5.7
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +1
Query: 79 KPRVLILGGCGFIGRNLV 132
K RVLI+GG G+IGR +V
Sbjct: 3 KSRVLIVGGTGYIGRRIV 20
>12_02_0352 - 17862577-17863528,17864076-17864827
Length = 567
Score = 29.1 bits (62), Expect = 7.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3
Query: 534 DEEQSGTRAEKHGGPELHHHKAR 602
D E+ EKHGG HHH++R
Sbjct: 378 DPEEEDDDGEKHGGSYGHHHQSR 400
>05_04_0020 -
17199627-17199947,17200129-17200203,17200301-17200384,
17200483-17200562,17201354-17201508,17202602-17203215
Length = 442
Score = 29.1 bits (62), Expect = 7.5
Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +1
Query: 85 RVLILGGCGFIGRNLVXYLI-RNDLV 159
RVL+ GG GF+G +LV L+ R D V
Sbjct: 126 RVLVTGGAGFVGSHLVDRLVERGDSV 151
>01_03_0042 - 11893004-11893645
Length = 213
Score = 29.1 bits (62), Expect = 7.5
Identities = 14/26 (53%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Frame = +1
Query: 85 RVLILGGCGFIGRNLVXYLI-RNDLV 159
RVL+ GG GF+G +LV L+ R D V
Sbjct: 114 RVLVTGGAGFVGSHLVDRLVERGDSV 139
>11_05_0100 -
19056465-19056470,19057043-19057276,19058391-19058546,
19059639-19059763,19059912-19059983,19060080-19060184,
19060691-19060745,19061576-19061656,19062806-19062869,
19064715-19064782,19064947-19065033,19066121-19066285,
19066310-19066429,19066485-19066607,19066738-19067019,
19067936-19068075,19068234-19068335,19068802-19068874,
19069061-19069171
Length = 722
Score = 28.7 bits (61), Expect = 9.9
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = -1
Query: 798 VIDLLVGLRTGPESPDGTTDVADMYRVHFQIASPKEFHCFA*ML 667
V D L G R E DGTTD+ VHF S E C+ +L
Sbjct: 433 VSDKLEGFRAAKEYLDGTTDIT--RTVHFGKPSEHEKSCYTAVL 474
>03_02_0573 -
9571040-9571234,9571352-9571444,9571735-9571818,
9572401-9572480,9572609-9572759,9573067-9573579
Length = 371
Score = 28.7 bits (61), Expect = 9.9
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +1
Query: 61 PTGDHLKP-RVLILGGCGFIGRNLVXYLI-RNDLV 159
P G P RV++ GG GF+G +LV L+ R D V
Sbjct: 100 PVGVRKPPLRVVVTGGAGFVGSHLVDELLARGDSV 134
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,955,765
Number of Sequences: 37544
Number of extensions: 709010
Number of successful extensions: 2361
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2360
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3771247248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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