Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_D08
         (1227 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40953-3|AAB52650.1|  342|Caenorhabditis elegans Hypothetical pr...    36   0.077
U23511-14|AAC46799.1|  357|Caenorhabditis elegans Hypothetical p...    33   0.41 
U58761-4|AAB00715.1|  631|Caenorhabditis elegans Hypothetical pr...    31   1.3  
U64844-2|AAO25987.1|  846|Caenorhabditis elegans Hypothetical pr...    31   1.7  
U64844-1|AAK72092.1|  882|Caenorhabditis elegans Hypothetical pr...    31   1.7  
AF068713-16|AAD34663.1|  156|Caenorhabditis elegans Ground-like ...    31   2.2  
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr...    30   3.8  
AC024807-2|AAF59528.2|  431|Caenorhabditis elegans Hypothetical ...    30   3.8  
Z81586-3|CAB04691.1|  203|Caenorhabditis elegans Hypothetical pr...    29   8.9  

>U40953-3|AAB52650.1|  342|Caenorhabditis elegans Hypothetical
           protein F53B1.4 protein.
          Length = 342

 Score = 35.5 bits (78), Expect = 0.077
 Identities = 65/274 (23%), Positives = 113/274 (41%), Gaps = 21/274 (7%)
 Frame = +1

Query: 88  VLILGGCGFIGRNLVXYLIRNDLVSGLRVVDKXPPQLAF-LNPTH--SKTFEDPRVEYKS 258
           VLI GGCGFIG N + +       +     DK    LAF  +P H   +  E PR ++  
Sbjct: 11  VLITGGCGFIGSNYINFTFNKWKNTKFINYDK----LAFGASPLHVEKEIRESPRYKFVE 66

Query: 259 ANLINQTSCASALDPGDDAPWGLVVNCASETRGGQTEAVYAEGIVTLSLNVAKHCARMK- 435
           A L +Q +    L   +     +V++ A+ T     +  Y++ I T+  N+      ++ 
Sbjct: 67  AALEDQPTLIKTLQENE---VDMVIHFAAIT---HVDESYSDRIGTIQDNIISTTTLLES 120

Query: 436 --------VPRLVEISS----GQMCSNDKPQKEDCSI-DPWTIEGRMKSKVEQELK---N 567
                   V +LV IS+    G    +  P+ E  S+ +P       K+  E  ++   +
Sbjct: 121 IVNSPYKGVKKLVHISTDEVYGDSFEDTTPKSESASLPNPTNPYAASKAACEMVIRSYWH 180

Query: 568 MEDLNYTIIRPAIVYGIGDRRSLTPRLLYGGIYKHL-GETMKLLWTGDLKMNTVHVRDVC 744
              L Y ++R   VYG    R +  +L+       L G+   L+  G    + ++V D  
Sbjct: 181 SYKLPYVMVRMNNVYG---PRQIHTKLIPKFTKLALDGKPYPLMGDGLHTRSWMYVEDCS 237

Query: 745 RAIWTLGTSPQANKQIYNLVDEGNSTQGTLAELV 846
            AI  +        +IYN+  +   T   L +++
Sbjct: 238 EAITRVALEGTLG-EIYNIGTDFEMTNIELTKMI 270


>U23511-14|AAC46799.1|  357|Caenorhabditis elegans Hypothetical
           protein C32D5.12 protein.
          Length = 357

 Score = 33.1 bits (72), Expect = 0.41
 Identities = 11/32 (34%), Positives = 22/32 (68%)
 Frame = +1

Query: 88  VLILGGCGFIGRNLVXYLIRNDLVSGLRVVDK 183
           V + GG G +GR +V  L+ N+ ++ +R++D+
Sbjct: 4   VAVTGGAGLVGRYVVQRLLENEQIAEIRIIDR 35


>U58761-4|AAB00715.1|  631|Caenorhabditis elegans Hypothetical
           protein C01F1.3a protein.
          Length = 631

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +1

Query: 88  VLILGGCGFIGRNLVXYL 141
           V+I GGCGFIG N V Y+
Sbjct: 8   VVITGGCGFIGSNFVNYI 25


>U64844-2|AAO25987.1|  846|Caenorhabditis elegans Hypothetical
           protein T22F3.3b protein.
          Length = 846

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -1

Query: 813 PFVNQVIDLLVGLRTGPESPDGTTDVADMYRVHFQIASPKEFHCF 679
           P + Q+I+ + G    PE PD   D+++M R H +     +F  F
Sbjct: 738 PMLKQIIEQIEGGMFTPEDPDQLKDLSNMLRYHDRFMVCADFDAF 782


>U64844-1|AAK72092.1|  882|Caenorhabditis elegans Hypothetical
           protein T22F3.3a protein.
          Length = 882

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -1

Query: 813 PFVNQVIDLLVGLRTGPESPDGTTDVADMYRVHFQIASPKEFHCF 679
           P + Q+I+ + G    PE PD   D+++M R H +     +F  F
Sbjct: 774 PMLKQIIEQIEGGMFTPEDPDQLKDLSNMLRYHDRFMVCADFDAF 818


>AF068713-16|AAD34663.1|  156|Caenorhabditis elegans Ground-like
           (grd related) protein31 protein.
          Length = 156

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = -3

Query: 991 AGGSTCGRCRPTXSGACRWLPPPXTLC 911
           AGG  CG C     G C   PPP   C
Sbjct: 28  AGGGGCGGCGGGCGGGCGCAPPPPPCC 54


>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical protein
            K04H4.2c protein.
          Length = 1446

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
 Frame = -3

Query: 1054 PSRQSCLLRSSSTPALARGACAG---GSTC--GRCRP-TXSGACRWLPPPXTLCRS*P 899
            P R S L  S+S+P+     C+    GS C  G C P T S  C    PP   C   P
Sbjct: 157  PKRMSSLSPSTSSPSNTENPCSKCPLGSACRNGNCIPLTTSNLCSDGSPPNNTCTRDP 214


>AC024807-2|AAF59528.2|  431|Caenorhabditis elegans Hypothetical
           protein Y53G8AL.2 protein.
          Length = 431

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 9/217 (4%)
 Frame = +1

Query: 88  VLILGGCGFIGRNLVXYLIRNDLVSGLRVVDKXPPQLAFLNPTHSKTFEDPRVEYKSANL 267
           V + G  GF+G  +V    +N   S + +  +  P   +    H    E  +V Y    L
Sbjct: 62  VTVFGASGFLGLPVVNKFAKNG--SQIIIPYRQDP---YYMREHKVLGELGQVLYFPFEL 116

Query: 268 INQTSCASALDPGDDAPWGLVVNCASETRGGQTEAVYAEGIVTLSLNVAKHCARMKVPRL 447
           +++ S   A+   +     +V+N    TR    +  Y +   T +  +A+ C  M V + 
Sbjct: 117 MDEESIRKAVKYSN-----VVINLIG-TRVPTGKYNYYDVNDTGARRLARICKEMGVEKF 170

Query: 448 VEISSGQMCSNDKPQKEDCSIDPWTIEGRMKSKVEQELKNMEDLNYTIIRPAIVYGIGD- 624
           V +S+  + +  +PQK         +  +   +V    +  E    TIIRP+++YG  D 
Sbjct: 171 VHLSA--LGATTQPQKGHFVAKSQFLHSKGLGEVAVREEFPEA---TIIRPSVIYGELDG 225

Query: 625 -------RRSLTPRLLYGGIYKHLGETMKL-LWTGDL 711
                  R   TP L Y  +YK   ET K+ +W GD+
Sbjct: 226 FIQYYVSRWRKTP-LDYVYLYKKGEETYKMPIWVGDV 261


>Z81586-3|CAB04691.1|  203|Caenorhabditis elegans Hypothetical
           protein T05F1.4 protein.
          Length = 203

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 21/62 (33%), Positives = 24/62 (38%)
 Frame = +3

Query: 522 DRRSDEEQSGTRAEKHGGPELHHHKARYCVRNRRQKKFDTPSPLRWNLQAFRRNNETPLD 701
           D +SD   S  R   H      H    Y  +NR   +  TPSP   N     RNN  P D
Sbjct: 35  DNQSDRHLSPDRRSNHSEDRHEHRFNNYRQQNRPNSR--TPSPSNHNQVQTYRNN--PFD 90

Query: 702 WR 707
            R
Sbjct: 91  AR 92


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,855,299
Number of Sequences: 27780
Number of extensions: 547588
Number of successful extensions: 1602
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1601
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3391198850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)