Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_D07
         (1222 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z67995-1|CAA91943.1|  279|Caenorhabditis elegans Hypothetical pr...   221   8e-58
U58750-5|AAB00645.1|  299|Caenorhabditis elegans Hypothetical pr...   126   2e-29
Z82082-8|CAE53736.1|   83|Caenorhabditis elegans Hypothetical pr...    31   1.7  
Z30662-4|CAA83139.3|  376|Caenorhabditis elegans Hypothetical pr...    30   3.8  
U53343-2|AAQ81274.1|  196|Caenorhabditis elegans Hypothetical pr...    30   3.8  
Z49907-5|CAA90087.1|  327|Caenorhabditis elegans Hypothetical pr...    29   8.8  

>Z67995-1|CAA91943.1|  279|Caenorhabditis elegans Hypothetical
           protein M153.1 protein.
          Length = 279

 Score =  221 bits (540), Expect = 8e-58
 Identities = 119/264 (45%), Positives = 159/264 (60%), Gaps = 1/264 (0%)
 Frame = +2

Query: 110 MKIGFIGGGRLAFALANGFISAGLAKPDEITASCHPSDVASAKAFQGLGATALFENXXXX 289
           MKIGFIG G++A ALA G I++G    D I AS    D       + LG     +N    
Sbjct: 1   MKIGFIGAGKMAQALARGLINSGRITADNIIASSPKRDEVFLDQCKALGLNTTHDNAEVV 60

Query: 290 XXXXXXXXXXXXXXXXPALKEIKNLPSAKNKLFISVAMGITIATVESNLPSEARVIRVMP 469
                               EI    S K  L +S+A+GITI  +ES LP+++RV+RVMP
Sbjct: 61  QKSDVVFLAVKPVHVSKVASEIAPALS-KEHLVVSIALGITIRNIESLLPTKSRVVRVMP 119

Query: 470 NTPALVKEGAAAFSRGTKATAEDAQLTSQLFKAVGTCDEVPEYQMDAITALSGSGPAYVY 649
           NTP++V+ GA+AF+ G+     DA+   +L   VG   EVPE  +D +T LSGSGP+Y++
Sbjct: 120 NTPSVVRAGASAFAMGSACRDGDAETVEKLLSTVGFAVEVPEIHIDPVTGLSGSGPSYMF 179

Query: 650 MLIESLADGGVRCGLPRDLALRLAAQTTLGSAAMV-KTGDHPAMLKDNVTSPAGSTAEGT 826
            +IE LADGGV+ GLPRDLAL+LAA T LG+A MV +TG HPA LKD+V SPAGS+  G 
Sbjct: 180 AVIEGLADGGVKVGLPRDLALKLAAYTLLGAAKMVLETGIHPAQLKDDVQSPAGSSVYGM 239

Query: 827 YHLEKNGFRSAIIGAVSAAVDRCK 898
           + LE  G +  ++ AV AA +R +
Sbjct: 240 HKLESGGLKGVLMDAVEAATNRSR 263


>U58750-5|AAB00645.1|  299|Caenorhabditis elegans Hypothetical
           protein F55G1.9 protein.
          Length = 299

 Score =  126 bits (305), Expect = 2e-29
 Identities = 91/287 (31%), Positives = 137/287 (47%), Gaps = 16/287 (5%)
 Frame = +2

Query: 104 EAMKIGFIGGGRLAFALANGFISAGLAKPDEITASCHPSDVASAKAFQGLGATALFENXX 283
           E++   FIGGG +A A+  G  + G      I          SA+ ++ LG   +F N  
Sbjct: 13  ESVPFVFIGGGNMAAAIIKGCQNKGFTPKSNIVIGVQTEK--SAEKWRQLGYKNVFTNTL 70

Query: 284 XXXXXXXXXXXXXXXXXXPALKEIKNLP-SAKNKLFISVAMGITIATVESNLP---SEAR 451
                                + + + P +++ +  ISV  G+ +  + + LP       
Sbjct: 71  EMLERYSTAIYVICVKPQVFEEVVSSWPVNSRPEFIISVMAGVPLKVLNAKLPFVSGNTT 130

Query: 452 VIRVMPNTPALVKEGAAA--FSRGTKATAEDA--QLTSQLFKAVGTCDEVPEYQMDAITA 619
           ++R+MPN  + +  GA+   + +  K   +D+  +L  +  + VGT + +PE   +   A
Sbjct: 131 IVRLMPNVASSIGAGASTMCYEKNEKIMNQDSHIELAREFAECVGTVELIPERCFNPAMA 190

Query: 620 LSGSGPAYVYMLIESLADGGVRCGLPRDLALRLAAQTTLGSAAMVKTGD--------HPA 775
           + GS PA+ +M IESLADG V  GL R  A RLAAQ  LG+A MV   +        H  
Sbjct: 191 IGGSSPAWTFMYIESLADGAVAQGLGRAEAKRLAAQAVLGAAQMVLNSNSGFDIETQHFG 250

Query: 776 MLKDNVTSPAGSTAEGTYHLEKNGFRSAIIGAVSAAVDRCKIVKKQL 916
            LKD V SP G+T EG   LEKNGFR A++ AV AA  +   + K L
Sbjct: 251 SLKDMVCSPGGTTIEGVRALEKNGFRYAVMEAVVAASTKADEMAKSL 297


>Z82082-8|CAE53736.1|   83|Caenorhabditis elegans Hypothetical
           protein ZC334.11 protein.
          Length = 83

 Score = 31.1 bits (67), Expect = 1.7
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
 Frame = -1

Query: 949 KFFR*--LCGXIVQLFFYNLTSIYCRRHCTDYGRTETVFLQVICSLSGRPCGTGDIVFQH 776
           KFFR   LC  ++    +   S   +R C   GR    ++  IC   G PC  GDI+ +H
Sbjct: 2   KFFRLILLCALVLTTMAFLAPSTAAKRRC---GRRLIPYVYSIC---GGPCENGDIIIEH 55


>Z30662-4|CAA83139.3|  376|Caenorhabditis elegans Hypothetical
           protein T16H12.4 protein.
          Length = 376

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 4/84 (4%)
 Frame = +2

Query: 611 ITALSGSGPAYVYMLIESLADGGVRC---GLPRDL-ALRLAAQTTLGSAAMVKTGDHPAM 778
           I+ALS   P  +Y  IE++    +RC   GL  ++   +  A+ T G  ++    DH  +
Sbjct: 175 ISALSTIDPGNIYSTIETMKRMNIRCSAIGLSAEMFVCKEMAKATKGEYSVALDPDHLQL 234

Query: 779 LKDNVTSPAGSTAEGTYHLEKNGF 850
           L    T P  S      +    GF
Sbjct: 235 LFSKHTLPPSSAKSSECNAIHVGF 258


>U53343-2|AAQ81274.1|  196|Caenorhabditis elegans Hypothetical
           protein F22F4.5 protein.
          Length = 196

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -2

Query: 636 GPLPLRAVIASIWYSGTSSQVP-TALKSCD 550
           GP P+R ++  I Y  T+ QVP T  K CD
Sbjct: 41  GPHPIRTMVDGIDYCATAIQVPITTQKKCD 70


>Z49907-5|CAA90087.1|  327|Caenorhabditis elegans Hypothetical
           protein B0491.5 protein.
          Length = 327

 Score = 28.7 bits (61), Expect = 8.8
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +2

Query: 341 ALKEIKNLPSAKNKLFISVAMGITIATVESNL 436
           A   I++     N  F SVA+G T+AT++SN+
Sbjct: 235 AASSIRHKDDVHNHWFASVAVGSTVATMKSNV 266


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,013,712
Number of Sequences: 27780
Number of extensions: 511774
Number of successful extensions: 1136
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3370329934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)