Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_D06
         (1201 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    27   0.37 
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           24   2.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   7.9  

>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 26.6 bits (56), Expect = 0.37
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
 Frame = +1

Query: 691 QTNKGPLYYIVKPNNF--NAANNLEQSTILPQTSALNNDASYIIRYTNKQPNEFSNVP 858
           + N G    I  P  F    ANNL QSTIL  T   N D S+  +  + +  + SN P
Sbjct: 10  EINNGETIIISCPGGFVMEDANNLTQSTIL-TTCESNTDFSFGSKTIDFRKIQCSNSP 66


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 10/38 (26%), Positives = 22/38 (57%)
 Frame = +1

Query: 817 RYTNKQPNEFSNVPKNNDDTSNMNFGSQNSNHQSTHNT 930
           ++ N QP+  +N   NN+  ++ N   +N+ + + +NT
Sbjct: 363 QWRNNQPSTSNNRWHNNNGNNSNNHWRKNNPNDNRNNT 400


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 7.9
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 892 GSQNSNHQSTHNTIRSDKNNPTVDNFLQMLMGI 990
           G + + H  THN      +N TVD++ + + G+
Sbjct: 250 GHEIAVHSITHNDDERFWSNATVDDWAKEMAGM 282


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 219,457
Number of Sequences: 336
Number of extensions: 4537
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 34938740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)