Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_D06
         (1201 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    30   0.12 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    27   1.4  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    27   1.4  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    27   1.4  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    26   1.9  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    25   4.4  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 30.3 bits (65), Expect = 0.12
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = +1

Query: 775 PQTSALNNDASY--IIRYTNKQPNEFSNVPKNNDDTSNMNFGSQNSNHQSTHNTIRSDKN 948
           P +++L+   S+  +  Y N  P   SN+P NN    N   G   SN  S H  + + +N
Sbjct: 362 PSSNSLSTQHSHSPVNGYGNNHPTGGSNLPGNN----NGGAGGGGSNTPSNHGALGNTQN 417

Query: 949 N 951
           N
Sbjct: 418 N 418


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 26.6 bits (56), Expect = 1.4
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = +1

Query: 835 PNEFSNVPKNNDDTSNMN----FGSQNSNHQSTHNTIRSDK 945
           PN  SN   NN+++S+ N      S N+N+ S H+    DK
Sbjct: 193 PNASSNNSNNNNNSSSNNNNNTISSNNNNNNSLHHGPLRDK 233



 Score = 25.8 bits (54), Expect = 2.5
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 838 NEFSNVPKNNDDTSNMNFGSQNSNHQSTHNTIRSDKNN 951
           +E  ++P  + + SN N    NS+  + +NTI S+ NN
Sbjct: 187 DERDSLPNASSNNSNNN---NNSSSNNNNNTISSNNNN 221


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 26.6 bits (56), Expect = 1.4
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = +1

Query: 835 PNEFSNVPKNNDDTSNMN----FGSQNSNHQSTHNTIRSDK 945
           PN  SN   NN+++S+ N      S N+N+ S H+    DK
Sbjct: 193 PNASSNNSNNNNNSSSNNNNNTISSNNNNNNSLHHGPLRDK 233



 Score = 25.8 bits (54), Expect = 2.5
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 838 NEFSNVPKNNDDTSNMNFGSQNSNHQSTHNTIRSDKNN 951
           +E  ++P  + + SN N    NS+  + +NTI S+ NN
Sbjct: 187 DERDSLPNASSNNSNNN---NNSSSNNNNNTISSNNNN 221


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 26.6 bits (56), Expect = 1.4
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
 Frame = +1

Query: 835 PNEFSNVPKNNDDTSNMN----FGSQNSNHQSTHNTIRSDK 945
           PN  SN   NN+++S+ N      S N+N+ S H+    DK
Sbjct: 145 PNASSNNSNNNNNSSSNNNNNTISSNNNNNNSLHHGPLRDK 185



 Score = 25.8 bits (54), Expect = 2.5
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 838 NEFSNVPKNNDDTSNMNFGSQNSNHQSTHNTIRSDKNN 951
           +E  ++P  + + SN N    NS+  + +NTI S+ NN
Sbjct: 139 DERDSLPNASSNNSNNN---NNSSSNNNNNTISSNNNN 173


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 26.2 bits (55), Expect = 1.9
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = +1

Query: 814 IRYTNKQPNEFSNVPKNNDDTSNMNFGSQNSNHQSTHN 927
           IR +  + +   N   NN + +N + G+ N+N  S++N
Sbjct: 182 IRDSRDERDSLPNASSNNSNNNNNSSGNNNNNTISSNN 219



 Score = 26.2 bits (55), Expect = 1.9
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = +1

Query: 835 PNEFSNVPKNNDDTS----NMNFGSQNSNHQSTHNTIRSDK 945
           PN  SN   NN+++S    N    S N+N+ S H+    DK
Sbjct: 193 PNASSNNSNNNNNSSGNNNNNTISSNNNNNNSLHHGPLRDK 233



 Score = 25.4 bits (53), Expect = 3.3
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 838 NEFSNVPKNNDDTSNMNFGSQNSNHQSTHNTIRSDKNN 951
           +E  ++P  + + SN N    NS+  + +NTI S+ NN
Sbjct: 187 DERDSLPNASSNNSNNN---NNSSGNNNNNTISSNNNN 221


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 25.0 bits (52), Expect = 4.4
 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
 Frame = +1

Query: 388 NERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVAFTNDNG-NL-YQSKESHS 561
           ++R ++D   EN+    TNS      + + +  S   Q +    +D   NL  +SK S S
Sbjct: 255 SDRLTEDDEDENISVTRTNSTIRSRSSSLSRSRSCSRQAETPRADDRALNLDTKSKPSTS 314

Query: 562 ENSGT 576
            +SGT
Sbjct: 315 SSSGT 319


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 944,695
Number of Sequences: 2352
Number of extensions: 17237
Number of successful extensions: 52
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 136112751
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)