Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_D06
(1201 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00043-11|AAN65290.1| 641|Caenorhabditis elegans Hypothetical p... 33 0.40
U00043-10|AAC77505.1| 779|Caenorhabditis elegans Hypothetical p... 33 0.40
AC006607-1|AAY44022.1| 208|Caenorhabditis elegans Hypothetical ... 32 0.93
AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical ... 31 1.2
Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical p... 31 1.6
Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical p... 31 1.6
Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical pr... 31 1.6
U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein. 31 1.6
U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activati... 31 1.6
U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 31 1.6
U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily ass... 31 1.6
U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily ass... 31 1.6
L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical pr... 31 1.6
AY288941-1|AAP44084.1| 987|Caenorhabditis elegans EGL-15 protein. 31 1.6
AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical ... 30 2.8
U80454-4|AAB37876.3| 896|Caenorhabditis elegans Prion-like-(q/n... 29 4.9
CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical ... 29 4.9
Z48621-2|CAA88547.1| 536|Caenorhabditis elegans Hypothetical pr... 29 6.5
Z81094-4|CAB03152.1| 528|Caenorhabditis elegans Hypothetical pr... 29 8.6
U13876-13|AAA21172.3| 370|Caenorhabditis elegans Prion-like-(q/... 29 8.6
>U00043-11|AAN65290.1| 641|Caenorhabditis elegans Hypothetical
protein T26A5.2b protein.
Length = 641
Score = 33.1 bits (72), Expect = 0.40
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 5/129 (3%)
Frame = +1
Query: 301 NHKVPHDLRNVENPS---QRPEHRDPQXYSALNERKSQDKHTENLIPNLTNSHKSYGYTG 471
++KVP L++V P Q R Q A++ + EN++ +L N HK +
Sbjct: 487 SNKVP--LQSVSEPKILLQDTNSRCAQPRKAVSHEGLKSHQQENVLKHLDNKHKFLCFVN 544
Query: 472 IDKDESIVSQDKVAFTNDNGN-LYQSKESHSENSGTSTQDTVP-KIIYVQTDGLQDNQLY 645
I K NDNGN L + EN G Q P I + TDGL+ ++
Sbjct: 545 IAK----------RIENDNGNPLVELSIGFDENGGKVQQSPWPLGIRMLLTDGLEKTEV- 593
Query: 646 QVAGSSGDS 672
++ G D+
Sbjct: 594 KIQGDVQDT 602
>U00043-10|AAC77505.1| 779|Caenorhabditis elegans Hypothetical
protein T26A5.2a protein.
Length = 779
Score = 33.1 bits (72), Expect = 0.40
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 5/129 (3%)
Frame = +1
Query: 301 NHKVPHDLRNVENPS---QRPEHRDPQXYSALNERKSQDKHTENLIPNLTNSHKSYGYTG 471
++KVP L++V P Q R Q A++ + EN++ +L N HK +
Sbjct: 625 SNKVP--LQSVSEPKILLQDTNSRCAQPRKAVSHEGLKSHQQENVLKHLDNKHKFLCFVN 682
Query: 472 IDKDESIVSQDKVAFTNDNGN-LYQSKESHSENSGTSTQDTVP-KIIYVQTDGLQDNQLY 645
I K NDNGN L + EN G Q P I + TDGL+ ++
Sbjct: 683 IAK----------RIENDNGNPLVELSIGFDENGGKVQQSPWPLGIRMLLTDGLEKTEV- 731
Query: 646 QVAGSSGDS 672
++ G D+
Sbjct: 732 KIQGDVQDT 740
>AC006607-1|AAY44022.1| 208|Caenorhabditis elegans Hypothetical
protein C09E7.10 protein.
Length = 208
Score = 31.9 bits (69), Expect = 0.93
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = +1
Query: 313 PHDLRNVENPSQRPEHR--DPQXYSALNERKSQDKHTENLI--PNLTNSHKSYGYTGIDK 480
P NV ++P+ + DP + L E +D H +I + + H YG T DK
Sbjct: 62 PEKENNVTLEKEKPKQKLIDPSTFITLKENDWRDAHEGRMIIWSHESQHHPDYGKTFTDK 121
Query: 481 DESIVSQDK 507
D Q K
Sbjct: 122 DRYTYRQSK 130
>AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical
protein Y39C12A.8 protein.
Length = 365
Score = 31.5 bits (68), Expect = 1.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 826 NKQPNEFSNVPKNNDDTSNMNFGSQNSNHQSTHNTIRSDKNNP 954
N + +E SN K N+ S+ + NHQS H ++ K+NP
Sbjct: 121 NHKKSEPSN-GKRNEQNSSFKQDHNSKNHQSNHQKTKNKKSNP 162
>Z81017-11|CAC70095.2| 1158|Caenorhabditis elegans Hypothetical
protein F58A3.2c protein.
Length = 1158
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 283 LIIEXRNHKVPHDLRNVENPSQRPEHRDPQXYSA-LNERKSQDKHTENLIPNLTNSH 450
+++E H D P + + Q + L RK+ DK LIPNLT H
Sbjct: 717 VVVELCKHGNLRDFLRAHRPKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773
>Z81017-10|CAE47468.1| 1051|Caenorhabditis elegans Hypothetical
protein F58A3.2e protein.
Length = 1051
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 283 LIIEXRNHKVPHDLRNVENPSQRPEHRDPQXYSA-LNERKSQDKHTENLIPNLTNSH 450
+++E H D P + + Q + L RK+ DK LIPNLT H
Sbjct: 717 VVVELCKHGNLRDFLRAHRPKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773
>Z81017-9|CAD44136.1| 1096|Caenorhabditis elegans Hypothetical
protein F58A3.2d protein.
Length = 1096
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 283 LIIEXRNHKVPHDLRNVENPSQRPEHRDPQXYSA-LNERKSQDKHTENLIPNLTNSH 450
+++E H D P + + Q + L RK+ DK LIPNLT H
Sbjct: 717 VVVELCKHGNLRDFLRAHRPKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773
>Z81017-8|CAC70094.2| 988|Caenorhabditis elegans Hypothetical
protein F58A3.2b protein.
Length = 988
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 283 LIIEXRNHKVPHDLRNVENPSQRPEHRDPQXYSA-LNERKSQDKHTENLIPNLTNSH 450
+++E H D P + + Q + L RK+ DK LIPNLT H
Sbjct: 665 VVVELCKHGNLRDFLRAHRPKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 721
>Z81017-7|CAB02673.2| 1040|Caenorhabditis elegans Hypothetical
protein F58A3.2a protein.
Length = 1040
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 283 LIIEXRNHKVPHDLRNVENPSQRPEHRDPQXYSA-LNERKSQDKHTENLIPNLTNSH 450
+++E H D P + + Q + L RK+ DK LIPNLT H
Sbjct: 717 VVVELCKHGNLRDFLRAHRPKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773
>U39761-1|AAC46934.1| 1040|Caenorhabditis elegans EGL-15 protein.
Length = 1040
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 283 LIIEXRNHKVPHDLRNVENPSQRPEHRDPQXYSA-LNERKSQDKHTENLIPNLTNSH 450
+++E H D P + + Q + L RK+ DK LIPNLT H
Sbjct: 717 VVVELCKHGNLRDFLRAHRPKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 773
>U02289-1|AAA18934.1| 1439|Caenorhabditis elegans GTPase-activating
protein protein.
Length = 1439
Score = 31.1 bits (67), Expect = 1.6
Identities = 41/213 (19%), Positives = 85/213 (39%), Gaps = 5/213 (2%)
Frame = +1
Query: 334 ENPSQRPEHRDPQXYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVA 513
E+PS+ H DP+ ++E + + + N +L N S G+D ++ + +V
Sbjct: 159 EDPSEDTGHDDPEETQEISE--TPIRRSRNRNASLRNRQSSRSLGGLDFEKLRMGTARVG 216
Query: 514 FTN----DNGNLYQSKESHSENSG-TSTQDTVPKIIYVQTDGLQDNQLYQVAGSSGDSII 678
+N +NG S +S + G TS+ TV ++ + +SG++
Sbjct: 217 DSNEATAENGTSSSSSRKNSRDDGLTSSPTTVAGPVFTTSS-------TSSISTSGEASS 269
Query: 679 MSRAQTNKGPLYYIVKPNNFNAANNLEQSTILPQTSALNNDASYIIRYTNKQPNEFSNVP 858
+ A G + AA Q++ + +N+A +IR + +
Sbjct: 270 TAVAAAAAGSV----------AATTSRQTSSNSSVDSNHNEAMKMIRRARPKSYVLATSA 319
Query: 859 KNNDDTSNMNFGSQNSNHQSTHNTIRSDKNNPT 957
N+D + + + + +H+T S + P+
Sbjct: 320 SMNEDVLSSSIIANEQSSSISHDTTTSGRELPS 352
>U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform b protein.
Length = 868
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +1
Query: 340 PSQRPEHRDPQXYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV 510
P Q ++ + YSA + K T N+I HK G++ + +DE ++ + +
Sbjct: 344 PKQNNGYQRQRRYSASSASKQDGMFTLNVIMGSQPVHKGMGFSTVKRDERVIVESVI 400
>U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform a protein.
Length = 1004
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +1
Query: 340 PSQRPEHRDPQXYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV 510
P Q ++ + YSA + K T N+I HK G++ + +DE ++ + +
Sbjct: 299 PKQNNGYQRQRRYSASSASKQDGMFTLNVIMGSQPVHKGMGFSTVKRDERVIVESVI 355
>U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform c protein.
Length = 1099
Score = 31.1 bits (67), Expect = 1.6
Identities = 14/57 (24%), Positives = 27/57 (47%)
Frame = +1
Query: 340 PSQRPEHRDPQXYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKV 510
P Q ++ + YSA + K T N+I HK G++ + +DE ++ + +
Sbjct: 394 PKQNNGYQRQRRYSASSASKQDGMFTLNVIMGSQPVHKGMGFSTVKRDERVIVESVI 450
>L16687-1|AAK71357.2| 1317|Caenorhabditis elegans Hypothetical
protein C04D8.1 protein.
Length = 1317
Score = 31.1 bits (67), Expect = 1.6
Identities = 41/213 (19%), Positives = 85/213 (39%), Gaps = 5/213 (2%)
Frame = +1
Query: 334 ENPSQRPEHRDPQXYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIVSQDKVA 513
E+PS+ H DP+ ++E + + + N +L N S G+D ++ + +V
Sbjct: 37 EDPSEDTGHDDPEETQEISE--TPIRRSRNRNASLRNRQSSRSLGGLDFEKLRMGTARVG 94
Query: 514 FTN----DNGNLYQSKESHSENSG-TSTQDTVPKIIYVQTDGLQDNQLYQVAGSSGDSII 678
+N +NG S +S + G TS+ TV ++ + +SG++
Sbjct: 95 DSNEATAENGTSSSSSRKNSRDDGLTSSPTTVAGPVFTTSS-------TSSISTSGEASS 147
Query: 679 MSRAQTNKGPLYYIVKPNNFNAANNLEQSTILPQTSALNNDASYIIRYTNKQPNEFSNVP 858
+ A G + AA Q++ + +N+A +IR + +
Sbjct: 148 TAVAAAAAGSV----------AATTSRQTSSNSSVDSNHNEAMKMIRRARPKSYVLATSA 197
Query: 859 KNNDDTSNMNFGSQNSNHQSTHNTIRSDKNNPT 957
N+D + + + + +H+T S + P+
Sbjct: 198 SMNEDVLSSSIIANEQSSSISHDTTTSGRELPS 230
>AY288941-1|AAP44084.1| 987|Caenorhabditis elegans EGL-15 protein.
Length = 987
Score = 31.1 bits (67), Expect = 1.6
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = +1
Query: 283 LIIEXRNHKVPHDLRNVENPSQRPEHRDPQXYSA-LNERKSQDKHTENLIPNLTNSH 450
+++E H D P + + Q + L RK+ DK LIPNLT H
Sbjct: 664 VVVELCKHGNLRDFLRAHRPKEEKAKKSSQELTDYLEPRKASDKDDIELIPNLTQRH 720
>AF026212-3|AAF99974.2| 1172|Caenorhabditis elegans Hypothetical
protein F52G3.1 protein.
Length = 1172
Score = 30.3 bits (65), Expect = 2.8
Identities = 22/103 (21%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Frame = +1
Query: 331 VENPSQRPEHRDPQXYSALNERKSQD--KHTENLIPN-LTNSHKSYGYTGIDKDESIVSQ 501
++N +Q Q + ++ K +D + T +P L G+ +S+ ++
Sbjct: 651 LQNHTQNQSQNQSQDHEKNSKTKPKDPKQGTRLFVPKALRKEADDLPANGLLSPQSVETK 710
Query: 502 DKVAFTNDNGNLYQSKESHSE--NSGTSTQDTVPKIIYVQTDG 624
+K+A NG++++S E +S T T+PK + + +G
Sbjct: 711 EKIAAAKSNGDVFKSDEQSKGFWDSLTPEVSTIPKKMTKKPEG 753
>U80454-4|AAB37876.3| 896|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 66
protein.
Length = 896
Score = 29.5 bits (63), Expect = 4.9
Identities = 43/218 (19%), Positives = 74/218 (33%), Gaps = 9/218 (4%)
Frame = +1
Query: 340 PSQRPEHRDPQXYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKDESIV-SQDKVAF 516
PS+R + DP +A N + + PN N+ + ++ SQ+
Sbjct: 574 PSKRKDQNDPNAQNAQNGKNDPNAQNAQSDPNAHNAQNVQNAPNVQNASNVQNSQNGQND 633
Query: 517 TND-NGNLYQSKESHSENSGTSTQDTVPKIIYVQT--DGLQDNQLYQVAGSSGDSIIMSR 687
ND N Q+ ++ + Y Q +G D D
Sbjct: 634 KNDPNAQNSQNGQNRQNDPNVQNSQNAQNGQYAQNSKNGQNDPNAKNAQNGQNDP-NAPN 692
Query: 688 AQTNKGPLYYIVKPNNFNAANNLEQSTI---LPQTSALNNDASYIIRYTNKQPNEFSNVP 858
AQ +K N+ NA N+ + ++A N + + PN N P
Sbjct: 693 AQNSKDDANAQNAQNDQNAPNDANGQNVQIDRNDSNAQNGQNAPNDQNAQNDPNA-QNAP 751
Query: 859 --KNNDDTSNMNFGSQNSNHQSTHNTIRSDKNNPTVDN 966
+N+ +T N SQN+ + + +N+P N
Sbjct: 752 NVQNSQNTRNAQ-NSQNAQNARNAPNAQIAQNDPNAPN 788
>CU457741-4|CAM36345.1| 1259|Caenorhabditis elegans Hypothetical
protein C42C1.4a protein.
Length = 1259
Score = 29.5 bits (63), Expect = 4.9
Identities = 20/71 (28%), Positives = 29/71 (40%)
Frame = +1
Query: 304 HKVPHDLRNVENPSQRPEHRDPQXYSALNERKSQDKHTENLIPNLTNSHKSYGYTGIDKD 483
H P D R + +Q P + LN+RK +D L N T + S G GI K+
Sbjct: 812 HVTPDDKRRIIRAAQNPMRPTILSFLYLNDRKFEDLIKCYLESNSTEVYSSIG--GILKE 869
Query: 484 ESIVSQDKVAF 516
+ + F
Sbjct: 870 AELTDDESAEF 880
>Z48621-2|CAA88547.1| 536|Caenorhabditis elegans Hypothetical
protein R07B1.3 protein.
Length = 536
Score = 29.1 bits (62), Expect = 6.5
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Frame = +1
Query: 319 DLRNVENPSQ------RPEHRDPQXYSAL-NERKSQDKHTENLIPNLTNSHKSYGYTGID 477
+L NV NP + +PE + Y+ L +E+K + + + ++K Y Y+ +D
Sbjct: 70 NLFNVTNPDEVKYLGAKPELIEVGGYAFLESEQKKYYEFSSDKTKMFYQNYKQYHYSEVD 129
Query: 478 KDESIVSQDKVAFTN 522
D DK+ F N
Sbjct: 130 NDAGYNYNDKIMFPN 144
>Z81094-4|CAB03152.1| 528|Caenorhabditis elegans Hypothetical
protein F58G11.6 protein.
Length = 528
Score = 28.7 bits (61), Expect = 8.6
Identities = 23/94 (24%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Frame = +1
Query: 526 NGNLYQSKESHSENSGTSTQD---TVPKIIYVQTDGLQDNQLYQVAGSSGDSIIMSRAQT 696
NG L ++S S S +T V + + D + +L QVA GD I +
Sbjct: 348 NGGLEIRRDSESSQSSRATPSQNGVVSRRLLRNIDQFLETELSQVASKIGDEIGDEKFPE 407
Query: 697 NKGPLYYIVKPNNFNAANNLEQSTILPQTSALNN 798
Y P++ + ++L S LP ++ +N
Sbjct: 408 APDFHYIYFNPSSLSMTSSLSTSPKLPVAASGSN 441
>U13876-13|AAA21172.3| 370|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 46
protein.
Length = 370
Score = 28.7 bits (61), Expect = 8.6
Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = +1
Query: 712 YYIVKPNNFNAANNLEQSTILPQTSALNN----DASYIIRYTNKQPNEFSNVPKNNDDTS 879
Y V + NN +Q PQ N + + Y N+Q +F+ N ++ +
Sbjct: 11 YAFVPQQGYQQQNNFQQYYGYPQQQQQGNQYYNNNNNNNGYYNQQQQQFNGYNNNYNNNN 70
Query: 880 NMNFGSQNSNHQSTHNTIRSDKNN 951
N N+N+ + +N ++ NN
Sbjct: 71 NQQQQFYNNNNNNYNNNNYNNNNN 94
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,741,612
Number of Sequences: 27780
Number of extensions: 401567
Number of successful extensions: 1303
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1297
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3297288728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -