Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_D05
         (1240 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    27   1.1  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            26   2.6  
AF457558-1|AAL68788.1|   56|Anopheles gambiae hypothetical prote...    25   6.0  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 27.1 bits (57), Expect = 1.1
 Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
 Frame = -1

Query: 1228 GXXXAPXPRGXXGXXPXXPVX---PXGPXGFXGXPXDXKXP 1115
            G   AP  +G  G  P  P     P GP GF G   D   P
Sbjct: 693  GLNGAPGEKGQKGETPQLPPQRKGPPGPPGFNGPKGDKGLP 733


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 25.8 bits (54), Expect = 2.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 411 VRNTKMLVLTITILSNTNCVPVFSSIVYFS 322
           V  T M+VLT  I+S   C+    S+VY++
Sbjct: 838 VDRTHMIVLTCVIVSVVACLVAALSLVYYT 867


>AF457558-1|AAL68788.1|   56|Anopheles gambiae hypothetical protein
           11 protein.
          Length = 56

 Score = 24.6 bits (51), Expect = 6.0
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = -1

Query: 346 ILLNCLFFTDSNLMSIFLWI*VCLHLSS*SKKATS 242
           +LL CLFF  ++  + +LW+ + +   S   + T+
Sbjct: 13  VLLICLFFYHTHCTTAYLWLAMGVEAKSIKARGTA 47


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 962,932
Number of Sequences: 2352
Number of extensions: 15947
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 141426462
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)