Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_D02
         (1172 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.     252   1e-68
Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.       232   1e-62
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    27   0.80 
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    27   1.4  
AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    25   3.2  
L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.       24   9.9  
L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.       24   9.9  
DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.       24   9.9  

>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score =  252 bits (617), Expect = 1e-68
 Identities = 123/127 (96%), Positives = 126/127 (99%)
 Frame = +2

Query: 80  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE 259
           MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPGTVALREIRRYQKSTE
Sbjct: 1   MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTE 60

Query: 260 LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTI 439
           LLIRKLPFQRLVREIAQDFKTDLRFQS+A+ ALQEASEAYLVGLFEDTNLCAIHAKRVTI
Sbjct: 61  LLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTI 120

Query: 440 MPKDIQL 460
           MPKDIQL
Sbjct: 121 MPKDIQL 127


>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score =  232 bits (568), Expect = 1e-62
 Identities = 114/115 (99%), Positives = 114/115 (99%)
 Frame = +2

Query: 86  RTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELL 265
           RTKQTARKSTGGKAPRKQLA KAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELL
Sbjct: 1   RTKQTARKSTGGKAPRKQLARKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELL 60

Query: 266 IRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 430
           IRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR
Sbjct: 61  IRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKR 115


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 27.5 bits (58), Expect = 0.80
 Identities = 13/50 (26%), Positives = 30/50 (60%)
 Frame = +2

Query: 224 LREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASE 373
           + +IR   K +++ + +     L+RE+A + K  + F+ +AVM + +++E
Sbjct: 71  VNDIRNRFKDSDVDVTRKDGILLLRELAAEVKNFMDFKMNAVMRIMDSAE 120


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 26.6 bits (56), Expect = 1.4
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +1

Query: 400 HQLVRHSCQKGHHYAKGYSAGEESAGR 480
           HQL+ +S  +    ++G S G  SAGR
Sbjct: 219 HQLITYSVGEAEQQSRGLSTGGPSAGR 245


>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 25.4 bits (53), Expect = 3.2
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
 Frame = +1

Query: 37  GYAFDQFIKSVLLGNGSNEADRPKVDRGESSAQTTRDESCPKKRTGDRRREEAPQISTRH 216
           GY    F++  +L  G NEAD         S+      +CP+K    +  E +  I T  
Sbjct: 52  GYVSRHFVRRYMLPKGHNEADIV----SSLSSDGILTITCPRKEIEQKNEERSIPI-THT 106

Query: 217 RSPQRD---KAIPE 249
             P +    KA PE
Sbjct: 107 GQPMKQVTGKAAPE 120


>L10441-1|AAA29361.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 9.9
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 103 PKVDRGESSAQTTRDESCPKKR 168
           PK +R +SS  T RDE  PK+R
Sbjct: 43  PKSNR-QSSEWTGRDEPAPKRR 63


>L10438-1|AAA29359.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 23.8 bits (49), Expect = 9.9
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 103 PKVDRGESSAQTTRDESCPKKR 168
           PK +R +SS  T RDE  PK+R
Sbjct: 43  PKSNR-QSSEWTGRDEPAPKRR 63


>DQ182013-1|ABA56305.1|   75|Anopheles gambiae G(alpha)c protein.
          Length = 75

 Score = 23.8 bits (49), Expect = 9.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +1

Query: 691 YIDEFGQTTTXMQ*KKCFICEICDAIALFVT 783
           ++D  GQ T   +  KCF C +   + L  T
Sbjct: 13  FVDVGGQRTQRQKWTKCFDCSVTSILFLVST 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 951,120
Number of Sequences: 2352
Number of extensions: 17436
Number of successful extensions: 29
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 132434028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)