Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_D01
(1193 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 303 5e-81
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 289 7e-77
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 243 8e-63
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 209 9e-53
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 184 4e-45
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 178 3e-43
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 176 8e-43
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 174 4e-42
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 167 7e-40
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 158 2e-37
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 137 5e-31
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 124 3e-27
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 122 1e-26
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 112 1e-23
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 107 4e-22
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 102 2e-20
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 100 6e-20
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 77 9e-13
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 76 2e-12
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 75 3e-12
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 75 4e-12
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 73 2e-11
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 72 3e-11
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 69 3e-10
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 66 1e-09
UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilu... 66 2e-09
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 62 3e-08
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 61 6e-08
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 60 8e-08
UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga... 60 8e-08
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 59 2e-07
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 58 3e-07
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 57 1e-06
UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus... 54 7e-06
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 52 2e-05
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 52 4e-05
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 50 9e-05
UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 49 2e-04
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 48 6e-04
UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 47 0.001
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 39 0.22
UniRef50_A6FVI8 Cluster: Surface repeat protein, putative; n=2; ... 34 6.3
UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whol... 34 8.4
UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol alpha-mannosy... 34 8.4
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 303 bits (744), Expect = 5e-81
Identities = 148/215 (68%), Positives = 174/215 (80%), Gaps = 6/215 (2%)
Frame = +3
Query: 225 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 404
TKIAS+GLKGRVFEVSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR
Sbjct: 55 TKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLR 114
Query: 405 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 584
MVKKWQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q++ IR KM I
Sbjct: 115 SMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAI 174
Query: 585 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMEL 764
I R++T+++L+ VV KL+PDSIAKDIEKAC +YPL DV IRKVKVLK+PRF++S LMEL
Sbjct: 175 IKREITSTDLKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKVLKKPRFDLSSLMEL 234
Query: 765 HXXXXXXXXXXXDKS------ERPEGYEPPVQESV 851
H + +RPEGYEPPVQ SV
Sbjct: 235 HGDGGGKAAEVSTGAASGVVVDRPEGYEPPVQASV 269
Score = 72.5 bits (170), Expect = 2e-11
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +2
Query: 122 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 262
+VDPFTRKDWYDVKAP+MF RQVG TLVNRTQG + ++G+ F
Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVF 67
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 289 bits (710), Expect = 7e-77
Identities = 146/220 (66%), Positives = 170/220 (77%), Gaps = 4/220 (1%)
Frame = +3
Query: 204 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 383
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 384 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 563
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 564 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 743
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 744 ISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 851
+ KLMELH D K ER +GYEPPVQESV
Sbjct: 225 LGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 64.1 bits (149), Expect = 7e-09
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +2
Query: 122 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 262
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape)
Length = 656
Score = 243 bits (594), Expect = 8e-63
Identities = 125/209 (59%), Positives = 154/209 (73%)
Frame = +3
Query: 225 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 404
TKIASEGLK RVFE+SLADLQAD D +++RK RL AE VQGRNVL NF GMD TTDKLR
Sbjct: 449 TKIASEGLKHRVFEISLADLQADED--QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLR 506
Query: 405 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 584
+V+KWQTLIEA++DVKTTD Y LR+FCI FT K +KTCYAQ +Q+R IR+KM EI
Sbjct: 507 SLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREI 566
Query: 585 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMEL 764
+T T+ +L+E+V K IP+SI ++IEKA IYPL++V IRKVK+LK P+F++ KLME+
Sbjct: 567 MTNMATSCDLKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKILKAPKFDLGKLMEV 626
Query: 765 HXXXXXXXXXXXDKSERPEGYEPPVQESV 851
H K ERP + PV E V
Sbjct: 627 H---GDYSEDVGTKLERPA--DEPVAEGV 650
Score = 58.0 bits (134), Expect = 4e-07
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +2
Query: 128 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNE 229
DPF +KDWYD+KAPS+F R VG TLV+RTQG +
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTK 450
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 209 bits (511), Expect = 9e-53
Identities = 100/180 (55%), Positives = 136/180 (75%)
Frame = +3
Query: 228 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 407
K A++ LKGR+FEVSLADLQ D D +FRK +L + VQG+N L NFHG+D T+DKLR
Sbjct: 55 KNANDALKGRIFEVSLADLQKDED--HAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRS 112
Query: 408 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 587
+V+KWQ+LIEAN+ VKTTD Y+LR+F I T + +KT YA +Q+RAIR+KM EII
Sbjct: 113 LVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTEII 172
Query: 588 TRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 767
R+ + L+++ NKLIP+ I ++IEKA GIYPL++V IRKVK+LK+P+F++ L+ LH
Sbjct: 173 QREASTCTLQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKLLKQPKFDLGGLLALH 232
Score = 58.0 bits (134), Expect = 4e-07
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = +2
Query: 128 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 262
DPF RKDWY +KAP+ F+ R VG TLVNR+ G +N ++G+ F
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIF 66
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 184 bits (448), Expect = 4e-45
Identities = 99/195 (50%), Positives = 136/195 (69%), Gaps = 14/195 (7%)
Frame = +3
Query: 225 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 404
TK+AS+GLKGRV+EVSLAD++ D + FRK +L AE V+GRNVL NF+GMDLT+DKLR
Sbjct: 53 TKLASDGLKGRVYEVSLADMK--DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLR 110
Query: 405 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 584
++ KW TLIE +DVKTTDGY LRVF I FT K ++KT YA+ ++V+AIRKKM +I
Sbjct: 111 SLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDI 170
Query: 585 ITRDVTNSELREVVNKLI--------------PDSIAKDIEKACHGIYPLRDVCIRKVKV 722
+T V++++L+ VV+ LI ++A+ I I+P+ +V IRKVKV
Sbjct: 171 LTETVSSNDLKTVVDYLIGVSLNGVTTNASGFAPTLAEKIRIEGSSIFPIHNVFIRKVKV 230
Query: 723 LKRPRFEISKLMELH 767
LK P+ + +KL EL+
Sbjct: 231 LKTPKVDAAKLSELY 245
Score = 49.2 bits (112), Expect = 2e-04
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Frame = +2
Query: 125 VDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQGNENCFGRIEGKSF 262
VDPFTRK+WY V+AP+ F K +VG T VNRTQG + ++G+ +
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVY 65
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 178 bits (433), Expect = 3e-43
Identities = 87/180 (48%), Positives = 118/180 (65%)
Frame = +3
Query: 312 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 491
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 492 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKA 671
FT K Q+ YAQ T+++ +R ++ E++ R+V +L+ VV KLIPDSI +D
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNE 125
Query: 672 CHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXDKSERPEGYEPPVQESV 851
I+PL +RKVKVLK+P+ ++ +++ELH + RP+ YEPPV ++V
Sbjct: 126 ASSIFPLSGALVRKVKVLKKPKLDLGRILELH--SEGKADEFGEGVPRPDHYEPPVVDAV 183
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 176 bits (429), Expect = 8e-43
Identities = 88/191 (46%), Positives = 126/191 (65%), Gaps = 3/191 (1%)
Frame = +3
Query: 204 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 383
L T +IASE +KGRV E +LADL+ D ++++RK +L+ + V GRN +F+G+D
Sbjct: 49 LVTKSSGNRIASEEIKGRVVESTLADLK-DNSNDKAWRKVKLVIDEVDGRNAKTSFYGLD 107
Query: 384 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL---SQRKTCYAQHTQV 554
+T D+L M++KWQTLIEA +D KT DGY++RVF + FT K S S TCYA+ +QV
Sbjct: 108 ITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQV 167
Query: 555 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 734
RAIR+K+ IT + + E LI + K IEK I+PL+++ IRKVKVLKRP
Sbjct: 168 RAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNIFPLQNITIRKVKVLKRP 227
Query: 735 RFEISKLMELH 767
+ + +K+ EL+
Sbjct: 228 KLDATKIAELY 238
Score = 49.2 bits (112), Expect = 2e-04
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +2
Query: 125 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSFRS 268
+DP +RK+WYD +AP FS + G TLV ++ GN I+G+ S
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVES 70
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 174 bits (423), Expect = 4e-42
Identities = 101/210 (48%), Positives = 135/210 (64%), Gaps = 1/210 (0%)
Frame = +3
Query: 225 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 404
TK+ S GL G VFE SLA LQ D RKF+LI E ++G+N L N +GMDLT DK
Sbjct: 40 TKMVSVGLNGLVFEASLASLQNDKVV---VRKFKLITEDMRGKNGLTNSYGMDLTWDKRC 96
Query: 405 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT-NKDSLSQRKTCYAQHTQVRAIRKKMCE 581
V KWQ ++EA+ DVKT D Y+L +FC+G+T N + R+ AQ+ QV I +
Sbjct: 97 NKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRYARQLVCAQYQQVHQIWLITIQ 155
Query: 582 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 761
I+ D ++L+EV+NKL+PD++ KD+EKAC IYPL DV +RKVK+L++P+ ++ KL E
Sbjct: 156 IM--DQRRTDLKEVLNKLVPDNVGKDVEKACQFIYPLHDVFVRKVKILQKPKLDLGKLPE 213
Query: 762 LHXXXXXXXXXXXDKSERPEGYEPPVQESV 851
LH KS+R YEPPVQESV
Sbjct: 214 LHALGLHGSHR---KSDR---YEPPVQESV 237
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 167 bits (405), Expect = 7e-40
Identities = 78/181 (43%), Positives = 124/181 (68%)
Frame = +3
Query: 225 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 404
T +A+E +KGRV E SLADLQ +D + ++RK +LI + V+G +F+G+D T DK+
Sbjct: 52 TVVATEAIKGRVVEASLADLQGQSD-QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIF 110
Query: 405 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 584
M+KK QTLIE ++ ++ DGY+LR+F I FT QRKT YAQ +Q++ IRKK+ EI
Sbjct: 111 GMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEI 170
Query: 585 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMEL 764
+ ++V+ + +++ +S+AK+I KA I+PL+++ +RKVK++KRP+ + KL E
Sbjct: 171 VLKEVSKKSITQLLGFFNQESLAKEIGKATRTIFPLQNITLRKVKLVKRPKVDAQKLREF 230
Query: 765 H 767
+
Sbjct: 231 Y 231
Score = 36.3 bits (80), Expect = 1.6
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 125 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGK 256
+DP RK+W+++ AP F+ G T +N++ G I+G+
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGR 62
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 158 bits (384), Expect = 2e-37
Identities = 69/181 (38%), Positives = 119/181 (65%)
Frame = +3
Query: 225 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 404
T+IA++ L+GRVFE +LADL E ++RK R + VQGRN+L FH M++TTDK+
Sbjct: 55 TRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMA 114
Query: 405 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 584
+++KW T +E ++VKT DGY +R+F + FT + Q + CYA+ V+ +R ++ ++
Sbjct: 115 NLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKM 174
Query: 585 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMEL 764
I R ++ +++E V+ L + ++ + + C+ I PLR++ IRKV+V++ P+F+ L+
Sbjct: 175 IKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRVVRTPKFDAQALLSA 234
Query: 765 H 767
H
Sbjct: 235 H 235
Score = 46.0 bits (104), Expect = 0.002
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2
Query: 128 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSFRS 268
+ RK+WYDV AP+ F KRQ T+ N+TQG + G+ F +
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEA 69
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 137 bits (332), Expect = 5e-31
Identities = 71/146 (48%), Positives = 99/146 (67%)
Frame = +3
Query: 225 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 404
T+IASE LKGRV EV+LADL + KF+ E V G++ L FHG+ LTTDKLR
Sbjct: 56 TRIASEQLKGRVVEVNLADLMENEKFGAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKLR 113
Query: 405 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 584
+VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S +KT YA+ Q++ IRK M +
Sbjct: 114 SIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNNL 173
Query: 585 ITRDVTNSELREVVNKLIPDSIAKDI 662
IT++ + EL + V+ L + K +
Sbjct: 174 ITKEAASRELTQFVDYLKKTNFQKKL 199
Score = 48.4 bits (110), Expect = 4e-04
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +2
Query: 122 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGK 256
I +PF++K+WY+VK P F +R VG +VN+T G +++G+
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGR 66
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 124 bits (300), Expect = 3e-27
Identities = 62/101 (61%), Positives = 74/101 (73%), Gaps = 4/101 (3%)
Frame = +3
Query: 561 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 740
IRKKM EI+TR+V ++L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+LK+P+F
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKF 170
Query: 741 EISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 851
E+ KLMELH D K ER +GYE PVQESV
Sbjct: 171 ELGKLMELHGEGCSSGKATGDETGVKVERADGYELPVQESV 211
Score = 78.2 bits (184), Expect = 4e-13
Identities = 47/87 (54%), Positives = 59/87 (67%)
Frame = +3
Query: 204 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 383
L T + TKIAS+G RVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHG+D
Sbjct: 48 LVTRTQGTKIASDG---RVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGVD 101
Query: 384 LTTDKLRWMVKKWQTLIEANIDVKTTD 464
LT+DK+ ++K I +V+T D
Sbjct: 102 LTSDKITSQIRKKMMEIMTR-EVQTND 127
Score = 59.3 bits (137), Expect = 2e-07
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +2
Query: 122 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNE 229
+VDPF++KDWYDV AP+MF+ R +G TLV RTQG +
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTK 56
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 122 bits (295), Expect = 1e-26
Identities = 60/159 (37%), Positives = 98/159 (61%)
Frame = +3
Query: 252 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 431
GR ++V+ ADL + D RKF ++G + F GM+LT+DK + M+KKW TL
Sbjct: 15 GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72
Query: 432 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 611
IEA D+ DG V RVF +G T + +KTCY +H+ + IRK M ++I +++ +
Sbjct: 73 IEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCD 132
Query: 612 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 728
+++++ KL +++ K IE+ I+PL++ C+RKVK +K
Sbjct: 133 VQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKTIK 171
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 112 bits (270), Expect = 1e-23
Identities = 61/180 (33%), Positives = 97/180 (53%)
Frame = +3
Query: 228 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 407
++A++ + RV+EV+L DL + KF L + V L NFHGMD+T K
Sbjct: 53 RVATDVINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGS 112
Query: 408 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 587
+ +K I+ +D+ TTDGY+LRVF I FT++ +RK C+ + +R +R + E +
Sbjct: 113 LFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETL 172
Query: 588 TRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 767
++ + +V KL + + +A I RDV IR+VKV+KRPR + L +H
Sbjct: 173 HNELGKVSIPVLVTKLSNFEVNAKLTEALQKITMCRDVMIRRVKVVKRPRNTMELLSTMH 232
Score = 39.9 bits (89), Expect = 0.13
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 128 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQG 223
DP+ +K+WY V AP+ F R +G T V +T G
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAG 51
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 107 bits (258), Expect = 4e-22
Identities = 53/164 (32%), Positives = 94/164 (57%)
Frame = +3
Query: 237 SEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVK 416
+ + ++++VSLAD+ E S F + + FHG+ LT DK+ ++K
Sbjct: 54 NSSVDNKIYQVSLADILGKE--EFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIK 111
Query: 417 KWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRD 596
KW TLIE ++ KT DGY L++F I + K + KT Y +Q RA+R+++ +II ++
Sbjct: 112 KWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKE 171
Query: 597 VTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 728
N ++++ ++++ I + IE C I+P+ V IRK+KV++
Sbjct: 172 GINMDIKDFIHRIYSLKIYEKIEINCSKIFPIHQVNIRKIKVVE 215
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 102 bits (244), Expect = 2e-20
Identities = 51/79 (64%), Positives = 56/79 (70%), Gaps = 4/79 (5%)
Frame = +3
Query: 627 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD- 803
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH D
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGDSSSSGKAIGDE 60
Query: 804 ---KSERPEGYEPPVQESV 851
K ER EGYEPPVQESV
Sbjct: 61 TGAKVERAEGYEPPVQESV 79
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 100 bits (240), Expect = 6e-20
Identities = 56/169 (33%), Positives = 92/169 (54%)
Frame = +3
Query: 228 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 407
++ + + RV+E+S AD+ D +R IA G V F GM LT DKL
Sbjct: 52 RVPMDYVNNRVWELSHADMVNDLSHAYRLFSWRSIAA---GSEVYTQFAGMRLTHDKLDS 108
Query: 408 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 587
+++K++T+I+A++D KT DG++LR+F IGFT K + S + YA + R +R M + +
Sbjct: 109 IMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKNHTYANSHKARQVRDVMIKAL 168
Query: 588 TRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 734
T + + ++ + + I +I + C I + V I KVKV+K P
Sbjct: 169 TDACEANGVEQLCKDFVDEKIENEIVEKCKQICQIESVYITKVKVIKAP 217
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 77.0 bits (181), Expect = 9e-13
Identities = 52/167 (31%), Positives = 86/167 (51%)
Frame = +3
Query: 252 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 431
GRV E +L D+ D + FR+ E + G + +F G +LT D +R +VK+ +
Sbjct: 44 GRVMESTLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSK 101
Query: 432 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 611
I+AN+ V T DG+ +RV I T K A+ +Q+ +IR+ M ++ +
Sbjct: 102 IDANVVVTTKDGFKVRVKPIVLTVK---------RARTSQIESIRQIMINVVNKRGAELG 152
Query: 612 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISK 752
E +N+++ +A +I K IYPLR V I K +++ RP +K
Sbjct: 153 FTEFINEVVTGKVASEIYKNTKNIYPLRRVEIGKSELVYRPAVAAAK 199
Score = 33.9 bits (74), Expect = 8.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 125 VDPFTRKDWYDVKAPSMFSKRQVGTTLVN 211
VD F K+WY V AP+ F++ +G TL +
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD 37
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 75.8 bits (178), Expect = 2e-12
Identities = 50/160 (31%), Positives = 82/160 (51%)
Frame = +3
Query: 255 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLI 434
R EVSL D+ D KF++ V+G L F G++LT D +R +V+K + +
Sbjct: 55 RTLEVSLYDITKDISHLPIKLKFQI--HRVEGLKALTRFKGLELTRDYIRSLVRKGTSKV 112
Query: 435 EANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 614
A +VKT DG V+R+ +G T + +K+ A+RKKM E + + +
Sbjct: 113 TAITEVKTKDGMVMRIAVLGITTHRIGTAQKS---------AMRKKMIETLVKKAAELDS 163
Query: 615 REVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 734
+ + +++ ++A D+ I P+R V I K+KVLK P
Sbjct: 164 GQFLKEILEGTLAADLFIVAKKIAPMRKVEIAKIKVLKYP 203
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 75.4 bits (177), Expect = 3e-12
Identities = 54/169 (31%), Positives = 85/169 (50%)
Frame = +3
Query: 252 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 431
GRV E +L DL + F++ VQG N F G D+TTD +R M+++ ++
Sbjct: 49 GRVAESTLYDLSGNFKKMHVKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSR 106
Query: 432 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 611
I+ +V+T+DGY +RV + ++ S KT IRKK+ E +T
Sbjct: 107 IDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKT---------EIRKKIQEYLTEKARAMT 157
Query: 612 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 758
E V +I D +++ K IYP+R + IRK +VL P +I +L+
Sbjct: 158 FSEYVKYIISDDAPRELSKELKVIYPVRRIEIRKSEVLHFPEEKIVELV 206
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 74.9 bits (176), Expect = 4e-12
Identities = 55/169 (32%), Positives = 85/169 (50%), Gaps = 4/169 (2%)
Frame = +3
Query: 240 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 419
E + GRV E +L D+ D FR+ V+G F G L D +R +V++
Sbjct: 34 EKVIGRVLETTLGDVLDDITKHHIKVFFRIYD--VEGTTAYSKFEGHRLMRDYVRSLVRR 91
Query: 420 WQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDV 599
+ I+ IDV T DGY +RV + FT T A+ +Q RAIRK+M ++I +
Sbjct: 92 GTSRIDGVIDVVTKDGYKVRVAGLAFT---------TRRAKTSQQRAIRKEMFKVIEENA 142
Query: 600 TNSELREVVNKLI----PDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 734
+ E + + + +SI + I++A IYP+R IRK +VL+ P
Sbjct: 143 KECDFDEFIRRCLSISEEESIPEQIKEAGRKIYPIRQAEIRKTEVLEEP 191
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 72.5 bits (170), Expect = 2e-11
Identities = 49/161 (30%), Positives = 80/161 (49%)
Frame = +3
Query: 252 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 431
GR E +LA+L D + +++K V G N F +LT + L + ++ +
Sbjct: 46 GRTVETTLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSK 105
Query: 432 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 611
IE +DV T DGY LRV + FT + + KT +Q RAIR M +I+ ++
Sbjct: 106 IEDIVDVTTADGYKLRVKSVVFT----VRRCKT-----SQKRAIRAIMRQIVVEKASSLN 156
Query: 612 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 734
+ + + + + +I K IYP+R V IRK+++L P
Sbjct: 157 FVQFLQECVLGKVPAEIYKNAKKIYPIRRVEIRKIELLAEP 197
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 72.1 bits (169), Expect = 3e-11
Identities = 52/163 (31%), Positives = 85/163 (52%)
Frame = +3
Query: 246 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 425
L GR E ++ +L D ++ K L V G + G +LTTD +R +VK+
Sbjct: 43 LVGRNVETTVGELT--NDMTKNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQT 100
Query: 426 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 605
+ I+AN+DV+T DG+V+RV FT K A+ +Q++AIR+ M +I+ + +
Sbjct: 101 SRIDANVDVRTKDGFVIRVKPTCFTIK---------RARSSQMQAIREMMVDIVKKRASE 151
Query: 606 SELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 734
++ + + I ++ I + IYPLR V IRK +V P
Sbjct: 152 TDFETFMQEAILGRLSAAIYRQAKFIYPLRRVEIRKTQVEAMP 194
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 68.5 bits (160), Expect = 3e-10
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = +3
Query: 204 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 383
L T + TKIAS+GLKG VFE+SLADLQ D E +FRKF+LI E VQG+ L NF M
Sbjct: 48 LVTRTQGTKIASDGLKGGVFEMSLADLQND---EVAFRKFKLITEDVQGKRCLINFRSMG 104
Query: 384 LTTD 395
L+ D
Sbjct: 105 LSCD 108
Score = 54.4 bits (125), Expect = 6e-06
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = +2
Query: 125 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 262
VD ++KDWYD+KAP+MF+ R +G TLV RTQG + ++G F
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVF 67
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 66.5 bits (155), Expect = 1e-09
Identities = 53/167 (31%), Positives = 82/167 (49%), Gaps = 4/167 (2%)
Frame = +3
Query: 246 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 425
L GRV E +L D+ D F+++ V+G F G +L D +R + ++
Sbjct: 40 LIGRVMETTLFDITGDYSYVHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRKS 97
Query: 426 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 605
+ + +V T DGY LRV + FT R+ C + +Q AIRK M EI+ +
Sbjct: 98 SKVTGIFNVWTKDGYGLRVTAMAFT-------RQRC--KTSQKSAIRKVMQEIVEQKARE 148
Query: 606 SELREVVNKLI----PDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 734
S L E++ ++ S+A I+++ IYPLR V I K K+L P
Sbjct: 149 STLDELIQLMVFSDHEGSLAYLIDESARKIYPLRKVEIAKSKLLWVP 195
>UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S3Ae - Thermofilum
pendens (strain Hrk 5)
Length = 207
Score = 65.7 bits (153), Expect = 2e-09
Identities = 47/165 (28%), Positives = 85/165 (51%)
Frame = +3
Query: 252 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 431
GR EVS D+ D KF+++ V L M++T D +R +V++ +
Sbjct: 43 GRTVEVSFYDITKDVSQLHIKLKFQIVK--VDDGIALTQLKLMEMTRDYIRSLVRRGTSR 100
Query: 432 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 611
++A +DV+T DG +RV + T +S+ KT +Q +AIR+ M +II+ + +
Sbjct: 101 VDAILDVQTKDGVKMRVMALAVT----VSRIKT-----SQKKAIRRIMFDIISEKAASLD 151
Query: 612 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEI 746
+ + + ++A +++ IYP++ V + K+KVL P EI
Sbjct: 152 FDTFIQQAVIGTMATEMQMQAKKIYPIKKVEVYKIKVL-TPTTEI 195
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 62.1 bits (144), Expect = 3e-08
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
Frame = +3
Query: 693 RDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXXD----KSERPEGYEPPVQESV 851
R +C++KVK+LK+P+FE+ KLMELH D K ER EGYEPPVQESV
Sbjct: 63 RVMCLKKVKMLKKPKFELGKLMELHGDSSSSGKAIGDETGAKVERAEGYEPPVQESV 119
Score = 41.5 bits (93), Expect = 0.042
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +2
Query: 122 IVDPFTRKDWYDVKAPSMFSKRQVGTT 202
++D F++KDWYDVKA +MF+ R +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 60.9 bits (141), Expect = 6e-08
Identities = 42/161 (26%), Positives = 75/161 (46%)
Frame = +3
Query: 252 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 431
GR E +L +L D + F++ V + F +LT D LR +V++ +
Sbjct: 42 GRTIETTLGELTNDASENNTKLTFKI--NEVASDSAYTEFIRHELTRDYLRSLVRRGSSK 99
Query: 432 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 611
+EA I V TTD Y +++ + T K A +Q +AIR+ M +++ +
Sbjct: 100 VEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKAIRRTMIDLVRETAEDHT 150
Query: 612 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 734
++++ ++ ++ I IYPLR V I+K + RP
Sbjct: 151 FEQLIDSVVEGRLSSAIYGEAKDIYPLRRVEIKKTTLEARP 191
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 60.5 bits (140), Expect = 8e-08
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 1/168 (0%)
Frame = +3
Query: 252 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 431
GR E +L DL D F+++ +G + F G +L+ D +R +V++ +
Sbjct: 50 GRKVETTLYDLTGDFSTVYVHLYFKVVRN--EGERLFTEFAGHELSRDYVRSLVRRKSSK 107
Query: 432 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH-TQVRAIRKKMCEIITRDVTNS 608
I +D+ T DG+ LRV + T Y H Q IRK M +++ +
Sbjct: 108 INKVVDITTKDGFTLRVKTLAL----------TAYRVHREQATTIRKIMEDVVKKTAEGK 157
Query: 609 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISK 752
E V ++I ++A +I I PLR I K KVL P + K
Sbjct: 158 TFDEFVQEMIFGNLANNIFNEAKKIAPLRKAEIEKSKVLFAPLIKEGK 205
>UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3Ae -
Caldivirga maquilingensis IC-167
Length = 221
Score = 60.5 bits (140), Expect = 8e-08
Identities = 50/162 (30%), Positives = 72/162 (44%)
Frame = +3
Query: 252 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 431
GR E +L DL D +FR+ V L F+GM+LT D +R +V++ +
Sbjct: 50 GRNVETTLYDLTKDLSHINVKLRFRVNG--VDDGRALTQFNGMELTRDYVRNLVRRGSSK 107
Query: 432 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 611
+ DV T DG LR+ + T T T IRK + + + + S+
Sbjct: 108 VMVIKDVTTKDGGKLRMEVLAIT---------TYRCTRTHKHLIRKSIMDRLDKVGQESD 158
Query: 612 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 737
+V I I D+ IYPLR V I K+KVL+ PR
Sbjct: 159 FDSLVRDSIMGKIQVDLFNVAKKIYPLRKVEIIKIKVLEYPR 200
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 59.3 bits (137), Expect = 2e-07
Identities = 45/161 (27%), Positives = 75/161 (46%)
Frame = +3
Query: 252 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 431
GR +L +L D+ A + F++ V F +LT D LR +V++ +
Sbjct: 42 GRTITTTLGELTGDSGANNTKLTFKITD--VGSDTAYTEFIKYELTRDYLRSLVRRGASK 99
Query: 432 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 611
+EA+I V TTD Y +RV + T K A +Q +AIR+ M + + +
Sbjct: 100 VEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKAIRRVMIDKVHAAAEDRT 150
Query: 612 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRP 734
V+ ++ +++ I IYPLR V I+K+ + RP
Sbjct: 151 FESFVDAIVEGNLSSAIYGDAKLIYPLRRVEIQKLTLEARP 191
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 58.4 bits (135), Expect = 3e-07
Identities = 44/161 (27%), Positives = 77/161 (47%)
Frame = +3
Query: 246 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 425
L GR+ E+SL DL + + F++ + V G N F G D T + L+ V++ +
Sbjct: 49 LIGRISEISLRDLTNEHSKHMTRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRR 106
Query: 426 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 605
+ I A ++V+T DG+ +RV + T + KT IR +M +II
Sbjct: 107 SKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT---------EIRVRMEQIIKEMAKE 157
Query: 606 SELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 728
+ E V+ ++ + I C ++PL+ V I K +V++
Sbjct: 158 TPFAEFVHAMLMGGLGSKIYGDCKKMFPLKRVEIFKSEVIE 198
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 56.8 bits (131), Expect = 1e-06
Identities = 42/165 (25%), Positives = 82/165 (49%)
Frame = +3
Query: 234 ASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMV 413
+ E + GR++E++ + D +FR ++E V G++ L F G T+ +R +
Sbjct: 50 SDEHIIGRIYEMTQQEFNGDFTKMHVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQI 107
Query: 414 KKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITR 593
++++ I+ IDV T DGY++R+ + T K Q + ++IR K +++
Sbjct: 108 RRYRGKIDDVIDVVTEDGYLVRIKPLIITQK---------RVQTSVKQSIRAKTRDVLLG 158
Query: 594 DVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 728
V + + ++ S+ +I+ IYP R V IRK ++L+
Sbjct: 159 YVAKTTYDALQVAMLDGSLETEIQNQIKTIYPCRSVVIRKSQLLQ 203
>UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S3Ae -
Methanoregula boonei (strain 6A8)
Length = 201
Score = 54.0 bits (124), Expect = 7e-06
Identities = 45/161 (27%), Positives = 75/161 (46%)
Frame = +3
Query: 240 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 419
E +KGR+ + +L ++ D + F+ IAE V G F G ++T D LR +VK+
Sbjct: 42 ETVKGRIMQATLGEITNDYAKQHIKMSFK-IAE-VTGDAAYTEFVGHEVTRDYLRSLVKR 99
Query: 420 WQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDV 599
+ I+ ++ V T D +R+ ++S A Q A+R + +
Sbjct: 100 RSSRIDCHVQVVTKDNKKVRL---------TISCYTFARANIAQEHALRNAITAGLVAQA 150
Query: 600 TNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 722
+L +VN ++ I+KD+ K +YP R V I K KV
Sbjct: 151 QAWDLNTLVNGVVSGEISKDLFKLVKTLYPTRRVEIIKSKV 191
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 52.4 bits (120), Expect = 2e-05
Identities = 41/160 (25%), Positives = 75/160 (46%)
Frame = +3
Query: 246 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 425
L GR EV++ +L D + + K R + V G F G TTD +R M+++
Sbjct: 44 LIGRGVEVTMRELSGDFS--KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGT 101
Query: 426 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 605
+ I+A+ VKT D +++ + T T A+ +Q + +R+ + +++
Sbjct: 102 SRIDASSVVKTKDDRKVKLHVLAVT---------TRRAKSSQQKYMRQVINDLLAETAAE 152
Query: 606 SELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVL 725
E++ ++ +A ++ IYPL+ V I K KVL
Sbjct: 153 KSFDELIKLVVNGKLASEVYHNAKKIYPLKRVEIIKSKVL 192
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 51.6 bits (118), Expect = 4e-05
Identities = 40/159 (25%), Positives = 75/159 (47%), Gaps = 1/159 (0%)
Frame = +3
Query: 240 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 419
E + GRV VSL +L D + F+++ V G F+G ++T + +R MVKK
Sbjct: 43 ENVPGRVLTVSLGELIQDYSKQNVRASFKIMN--VAGDAAYTQFNGHEMTKEFVRAMVKK 100
Query: 420 WQTLIEANIDVKTTDG-YVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRD 596
+ +++ I V L+V FT +A+ +QV+ +R KM +++
Sbjct: 101 RASRVDSTITVTPLGSTRELQVTITAFTIN---------HARLSQVQELRAKMVKVVEDS 151
Query: 597 VTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRK 713
++ V+ ++ ++K + C I+P+R + I K
Sbjct: 152 AKEADFESFVSAMLKGELSKKMFAECKPIFPVRRIEIIK 190
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 50.4 bits (115), Expect = 9e-05
Identities = 39/169 (23%), Positives = 78/169 (46%)
Frame = +3
Query: 249 KGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 428
KGRV EV+L D+ + +++ + I + V + F + + + LR +V++ +
Sbjct: 43 KGRVIEVTLFDILKGDPQQNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSS 101
Query: 429 LIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNS 608
+ +DVKT+DGYV R+ + T + + +K A+R + ++I V
Sbjct: 102 KVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK---------HALRLIIRDVIENTVPQM 152
Query: 609 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKL 755
+ + V I DI + +R + + KVK+++ +I+ L
Sbjct: 153 NIDQFVQAACYGKINSDILSRAKKLVKVRHMGLEKVKLVRTAEEQITLL 201
>UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasmatales|Rep: 30S ribosomal protein S3Ae -
Picrophilus torridus
Length = 209
Score = 49.2 bits (112), Expect = 2e-04
Identities = 42/160 (26%), Positives = 71/160 (44%)
Frame = +3
Query: 252 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 431
GR EV ++D + + FR+ + G+ F G ++ D +R MV++ +
Sbjct: 45 GRKVEVPVSDFTGNFRKSSTMVIFRV--KECTGKRCTTEFIGHKVSDDTIRRMVRRRKER 102
Query: 432 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 611
I+ + KT DGY L V I + L+ K +R K+ I +
Sbjct: 103 IDIIMPSKTKDGYRL-VIKIVLVSDSKLTANKR--------GEVRSKIIGFINERCGSMT 153
Query: 612 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKR 731
L E+ +I D++ DI +YP++ + IRK +VL R
Sbjct: 154 LPELAQYIIGDNVYNDIVDTLKDVYPIKKIEIRKSEVLGR 193
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 47.6 bits (108), Expect = 6e-04
Identities = 36/156 (23%), Positives = 71/156 (45%), Gaps = 1/156 (0%)
Frame = +3
Query: 255 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVL-CNFHGMDLTTDKLRWMVKKWQTL 431
R EVSL++L D S+ K + Y + + F+G L+ D + MV K L
Sbjct: 62 RNLEVSLSELINDYS---SYYKIIKLQPYTMNKMFIRTTFNGFRLSYDFIFSMVLKPTKL 118
Query: 432 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 611
+E +I + T V+ +F + +T +L Y + +++R I ++ I + + N
Sbjct: 119 VEFSIKINTLKKKVVEIFVL-YTITKNLHSNSITYGKRSRIRKINRESILCIKKMLENKP 177
Query: 612 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVK 719
+ + D I I++ + P+++ I ++K
Sbjct: 178 IDFIYKICCSDVIGNSIKRRSKRVIPIKNFIISRIK 213
>UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasma|Rep: 30S ribosomal protein S3Ae -
Thermoplasma volcanium
Length = 215
Score = 46.8 bits (106), Expect = 0.001
Identities = 44/177 (24%), Positives = 78/177 (44%)
Frame = +3
Query: 237 SEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVK 416
S + RV EV +++L + FR+ +G F G + D +R +V+
Sbjct: 41 SNSMVNRVVEVPISELTGNFKKSNEKALFRITN--CEGTKCKTIFIGHYIGDDYIRRLVR 98
Query: 417 KWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRD 596
+ + I+ DVKT+D ++ V + T+ + +K IRK + + I
Sbjct: 99 RRKERIDIIEDVKTSDNSIITVKIVVVTDGKVTNTKKF---------QIRKVLTDFILNK 149
Query: 597 VTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 767
+ E V LI D I D+ A IYPL+ + +RK +++ +S + E+H
Sbjct: 150 GLSLPYSEFVRYLIGDDIYNDMISATKDIYPLKKIEVRKSELV-----SLSGISEIH 201
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 39.1 bits (87), Expect = 0.22
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = -2
Query: 214 TVDKRGADLPLAEHRRSLDIVPIFASEWVDNLLLNTFFTALRQAFIFPDRHVQTQMKRKR 35
+ +K A++ AE RR L+++P+ S+ V LLL++ F L +FPD H + + R
Sbjct: 104 SANKGFANISDAEDRRRLNVIPVLLSKRVGCLLLSSLF-PLGNPLVFPDDHCELARSKVR 162
Query: 34 I 32
I
Sbjct: 163 I 163
>UniRef50_A6FVI8 Cluster: Surface repeat protein, putative; n=2;
cellular organisms|Rep: Surface repeat protein, putative
- Roseobacter sp. AzwK-3b
Length = 5954
Score = 34.3 bits (75), Expect = 6.3
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -1
Query: 824 ALRPFRLVSGFPLASTAFAVKFHQLR-DLETGPLQHFHLSDANIAQRVDAMAGLLDVLGN 648
AL RL + P+ V QL D+ TGP+ H + D Q V A GL+D+ GN
Sbjct: 5486 ALSVLRLGALVPVGPDGLGVALDQLDLDVTTGPV-HLNERDGIDLQSVIARDGLIDIFGN 5544
Query: 647 GV 642
G+
Sbjct: 5545 GL 5546
>UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13769, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 556
Score = 33.9 bits (74), Expect = 8.4
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = -2
Query: 448 SMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSAC 284
S+L S+ +C L++ +SLS+ S+ + +LRPC ++ ++L LS VS C
Sbjct: 389 SVLVSLSLCLSLSVLVSLSLSSSLSLSVPVSLRPCLSLSVLVSL--SLSVPVSLC 441
>UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol
alpha-mannosyltransferase; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Phosphatidyl-myo-inositol
alpha-mannosyltransferase - Herpetosiphon aurantiacus
ATCC 23779
Length = 381
Score = 33.9 bits (74), Expect = 8.4
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Frame = -2
Query: 445 MLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARET 266
+LA+ + CH T H+ + WKLQ+ LR T A+ +L + + ++ ++A ET
Sbjct: 107 LLANSKACHVSTFHIRVDEA----WKLQA-LRLAT--ALGPDLYRHIHGRIAGSQAALET 159
Query: 265 SKTLPFNPSEAIFVXLG-TVDKRGADLPLAE-HRRSLDIVPIF 143
++ + E + G T+D+ A + L H+ + D + +F
Sbjct: 160 AQAIFGTKDEYTIIASGITIDRFDAAVNLPRLHQYNDDKITLF 202
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 941,060,550
Number of Sequences: 1657284
Number of extensions: 18066577
Number of successful extensions: 49392
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 47382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49348
length of database: 575,637,011
effective HSP length: 102
effective length of database: 406,594,043
effective search space used: 119945242685
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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