Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_D01
(1193 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 298 1e-80
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 298 1e-80
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 289 5e-78
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 268 8e-72
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 215 8e-56
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 204 1e-52
AE014298-2816|AAF48933.1| 1513|Drosophila melanogaster CG12359-P... 29 9.5
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 298 bits (731), Expect = 1e-80
Identities = 148/213 (69%), Positives = 169/213 (79%), Gaps = 5/213 (2%)
Frame = +3
Query: 228 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 407
+IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R
Sbjct: 56 RIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRS 115
Query: 408 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 587
MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +II
Sbjct: 116 MVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDII 175
Query: 588 TRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 767
T +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELH
Sbjct: 176 TNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELH 235
Query: 768 XXXXXXXXXXXDKSE-----RPEGYEPPVQESV 851
SE RPEGYEPPVQE+V
Sbjct: 236 GDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 268
Score = 69.7 bits (163), Expect = 7e-12
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +2
Query: 122 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 262
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG ++G+ F
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVF 67
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 298 bits (731), Expect = 1e-80
Identities = 148/213 (69%), Positives = 169/213 (79%), Gaps = 5/213 (2%)
Frame = +3
Query: 228 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 407
+IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R
Sbjct: 56 RIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRS 115
Query: 408 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 587
MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +II
Sbjct: 116 MVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDII 175
Query: 588 TRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 767
T +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELH
Sbjct: 176 TNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELH 235
Query: 768 XXXXXXXXXXXDKSE-----RPEGYEPPVQESV 851
SE RPEGYEPPVQE+V
Sbjct: 236 GDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 268
Score = 69.7 bits (163), Expect = 7e-12
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +2
Query: 122 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 262
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG ++G+ F
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVF 67
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 289 bits (709), Expect = 5e-78
Identities = 143/205 (69%), Positives = 162/205 (79%), Gaps = 5/205 (2%)
Frame = +3
Query: 252 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 431
GRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTL
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTL 73
Query: 432 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 611
IEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++
Sbjct: 74 IEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGAD 133
Query: 612 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXX 791
L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+ELH
Sbjct: 134 LKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSV 193
Query: 792 XXXDKSE-----RPEGYEPPVQESV 851
SE RPEGYEPPVQE+V
Sbjct: 194 EAVVSSEGAVIDRPEGYEPPVQEAV 218
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 268 bits (658), Expect = 8e-72
Identities = 140/215 (65%), Positives = 162/215 (75%), Gaps = 7/215 (3%)
Frame = +3
Query: 228 KIASEGLKGRVFEVSLA-DLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 404
+IAS+ KGRVFEVSL DLQ D D E SFRKFRLIAE VQ RNVLCNFHGMDLTTDK R
Sbjct: 56 RIASDYFKGRVFEVSLVPDLQKDIDPEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYR 115
Query: 405 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRK-KMCE 581
MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYA +QVR IR +M +
Sbjct: 116 SMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAHESQVRKIRSGRMTD 175
Query: 582 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 761
IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PRF++SKL+E
Sbjct: 176 IITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLE 235
Query: 762 LHXXXXXXXXXXXDKSE-RPEG----YEPPVQESV 851
LH SE P+ +PPVQESV
Sbjct: 236 LHGDGGGKSVEAVVSSEGAPKSTALKVKPPVQESV 270
Score = 68.9 bits (161), Expect = 1e-11
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = +2
Query: 122 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 262
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +G+ F
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVF 67
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 215 bits (526), Expect = 8e-56
Identities = 106/163 (65%), Positives = 125/163 (76%), Gaps = 5/163 (3%)
Frame = +3
Query: 378 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 557
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 558 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 737
IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+C IYPL DV IRKVKVLK+PR
Sbjct: 61 KIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPR 120
Query: 738 FEISKLMELHXXXXXXXXXXXDKSE-----RPEGYEPPVQESV 851
F++SKL+ELH SE RPEGYEPPVQE+V
Sbjct: 121 FDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 163
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 204 bits (499), Expect = 1e-52
Identities = 97/133 (72%), Positives = 113/133 (84%)
Frame = +3
Query: 228 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 407
+IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R
Sbjct: 56 RIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRS 115
Query: 408 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 587
MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +II
Sbjct: 116 MVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDII 175
Query: 588 TRDVTNSELREVV 626
T +V+ ++L++++
Sbjct: 176 TNEVSGADLKQLL 188
Score = 69.7 bits (163), Expect = 7e-12
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +2
Query: 122 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 262
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG ++G+ F
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVF 67
>AE014298-2816|AAF48933.1| 1513|Drosophila melanogaster CG12359-PA
protein.
Length = 1513
Score = 29.5 bits (63), Expect = 9.5
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -3
Query: 300 RQCQLVDQPGKLRKLFPSILPKQFSXPWVRLT 205
+ C L+D P +LR FPS LP+ S P + LT
Sbjct: 163 QNCPLIDSPIRLR--FPSPLPEPPSLPTITLT 192
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,741,957
Number of Sequences: 53049
Number of extensions: 869310
Number of successful extensions: 2507
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2501
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6315662550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -