Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_C24
         (1169 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...   166   2e-43
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    25   0.83 
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    23   5.9  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    23   5.9  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score =  166 bits (404), Expect = 2e-43
 Identities = 83/110 (75%), Positives = 93/110 (84%), Gaps = 1/110 (0%)
 Frame = +3

Query: 33  SPMXLMAAKKHLEXNPDHSIVETLRQKAEADKNDKAVKDLVILLYETALLSSGFTLDEPQ 212
           S M  MAAKKHLE NPD SI++ LRQKAEADKNDKAVKDLVILL+ETALLSSGFTLDEPQ
Sbjct: 612 STMGYMAAKKHLEINPDPSILKNLRQKAEADKNDKAVKDLVILLFETALLSSGFTLDEPQ 671

Query: 213 VHASRIYRMIKLGLGIDEDEPIQVEEPASGDVPPLE-GDADDASRMEEVD 359
           VHASRIYRMIKLGLGIDE+E +  E+   GD P  +  +++DASRMEEVD
Sbjct: 672 VHASRIYRMIKLGLGIDEEEAMITEDAQGGDAPSADAAESEDASRMEEVD 721


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 25.4 bits (53), Expect = 0.83
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -3

Query: 618 YLLIMCNTALRTFSKVAYITNSNKT 544
           YLLI+C+  LR F ++  I +  K+
Sbjct: 211 YLLILCDQILREFDQIVVILSKVKS 235


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = -3

Query: 336 HHQHHPPMAARLQKQALQPESAH 268
           HH H PP +      A  PE  H
Sbjct: 52  HHSHMPPHSVFAANNAEFPEFVH 74


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.6 bits (46), Expect = 5.9
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = -3

Query: 336 HHQHHPPMAARLQKQALQPESAH 268
           HH H PP +      A  PE  H
Sbjct: 52  HHSHMPPHSVFAANNAEFPEFVH 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,014
Number of Sequences: 336
Number of extensions: 4070
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 58
effective length of database: 103,097
effective search space used: 34125107
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)