Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_C22
         (1210 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    26   0.65 
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    25   0.86 
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    23   6.1  

>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 25.8 bits (54), Expect = 0.65
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 773 LKRRTPSCIEPLHQYERSR 829
           L  RTPSC+E  H  E+ R
Sbjct: 249 LNFRTPSCLETFHTLEKCR 267


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 25.4 bits (53), Expect = 0.86
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = -1

Query: 649 LTPWYSPQYSPPP 611
           LTP ++P YSPPP
Sbjct: 19  LTPPHNPAYSPPP 31


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
            candidate 28 protein.
          Length = 248

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 1009 ISNIFDIVHF 980
            +SN+FD VHF
Sbjct: 103  VSNVFDFVHF 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,216
Number of Sequences: 336
Number of extensions: 4216
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35247023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)