Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_C22
         (1210 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    81   3e-17
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   2.3  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        23   5.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   9.4  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   9.4  
AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein ...    22   9.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   9.4  

>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 80.6 bits (190), Expect = 3e-17
 Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 1/207 (0%)
 Frame = +3

Query: 312 CLLRSFNNLVDYLKGGAPEMGIEXAEPIVIDELSIALGAGPDGYRATFKDIHASGAS-NM 488
           C+  +  + V  L GG     I   EP+ +D + I    G    R  +K+I   G + N+
Sbjct: 43  CIAEAVRDAVVSLAGGLKSFKILPIEPLAVDSVKIGESQGSVTLRQEYKNIKLYGLTKNL 102

Query: 489 TITNVRSDLETHQFQLTLYGPHISARARYRSSGVLLLVRASGGGEYWGEYHGVKAKVYFR 668
            I N   D +        Y P +   A Y+  G +LL+   G G+     + +K+     
Sbjct: 103 EIKNYNIDWDKCILSSESYNPQVDFVADYKIEGKVLLLPVRGAGKSNITMYDLKSHNDIY 162

Query: 669 GAPYERDGRTYLKLQQLKLDFSVKDIKMGVENLDNSNAVLQAALNLFISTNAQELLKEMK 848
              YE++G TYL++++  + F+   +K+  ENL + N  L   +N FI+ N++ L KE++
Sbjct: 163 CEKYEKNGETYLRIKKHAVKFNPAKVKLRFENLFDGNKELGEQMNRFINENSELLFKELQ 222

Query: 849 PELXRDLADXMSRYLXHILQHIPXXEL 929
                  +   ++    I   +P  ++
Sbjct: 223 AAYEETFSLVFTKIDNEIFNRVPFDKI 249


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 436 SGPAPRAIDSSSITMGSAXSMPISGAPP 353
           +G A + + S  + +GS   +PI G  P
Sbjct: 32  AGNAEKTLCSGQVCLGSVMQLPIHGTEP 59


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +3

Query: 294 DPNVXACLLRSFNNLVDYLKGGAPEMG 374
           DP +   LL+  N  V    GG P++G
Sbjct: 88  DPGMFPALLKDPNGNVVARNGGVPQLG 114


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 7/14 (50%), Positives = 13/14 (92%)
 Frame = -1

Query: 397  TMGSAXSMPISGAP 356
            ++GSA ++P+SG+P
Sbjct: 1844 SVGSARNIPVSGSP 1857


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = +3

Query: 702 LKLQQLKLDFSVKDIKMGVENLDN 773
           +K+Q++ +DF V  +  GV N+++
Sbjct: 486 IKMQKVLIDFWVSFVNNGVPNVNS 509


>AB083209-1|BAC54133.1|   87|Apis mellifera hypothetical protein
           protein.
          Length = 87

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 439 PSGPAPRAIDSSSITMGSA 383
           P GP P   DSS + +G++
Sbjct: 52  PPGPPPNNEDSSGVIVGAS 70


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 8/24 (33%), Positives = 17/24 (70%)
 Frame = +3

Query: 702 LKLQQLKLDFSVKDIKMGVENLDN 773
           +K+Q++ +DF V  +  GV N+++
Sbjct: 486 IKMQKVLIDFWVSFVNNGVPNVNS 509


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 256,320
Number of Sequences: 438
Number of extensions: 4520
Number of successful extensions: 16
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 41331843
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)