Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_C21
         (1185 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            27   0.81 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    26   1.9  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 27.5 bits (58), Expect = 0.81
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +2

Query: 203 GGXXGPPPPPP 235
           GG  GPPPPPP
Sbjct: 525 GGPLGPPPPPP 535



 Score = 25.4 bits (53), Expect = 3.3
 Identities = 10/22 (45%), Positives = 10/22 (45%)
 Frame = +3

Query: 465 PXPPPPXKNPXPXXGGGGXGXP 530
           P PPPP   P     GG  G P
Sbjct: 585 PPPPPPMGPPPSPLAGGPLGGP 606



 Score = 23.8 bits (49), Expect = 10.0
 Identities = 24/76 (31%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
 Frame = -2

Query: 644 PPPXPFFX--FXPXLXPFXXXFFXGFPPXFXGXXFPPXXGGXXXPPPPXPGXXVFXXGGG 471
           PPP       F P L P    F  GFP        PP       PPP  P       G  
Sbjct: 549 PPPLNLLRAPFFP-LNPAQLRFPAGFP-NLPNAQPPP---APPPPPPMGPPPSPLAGGPL 603

Query: 470 GGXPXXXPXXPXGXGF 423
           GG     P  P   GF
Sbjct: 604 GGPAGSRPPLPNLLGF 619


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 26.2 bits (55), Expect = 1.9
 Identities = 15/53 (28%), Positives = 19/53 (35%)
 Frame = +3

Query: 486 KNPXPXXGGGGXGXPPPXGGKXXSXKXGGKXXKKXXXKXXQXGXKXKKGXGGG 644
           K   P  GGGG G   P GG   S   G         +      + ++  GGG
Sbjct: 196 KEDEPGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGG 248



 Score = 25.0 bits (52), Expect = 4.3
 Identities = 13/51 (25%), Positives = 18/51 (35%)
 Frame = +3

Query: 492 PXPXXGGGGXGXPPPXGGKXXSXKXGGKXXKKXXXKXXQXGXKXKKGXGGG 644
           P    GG G G P   GG       GG        +  +   + ++G G G
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNG 250


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.309    0.148    0.490 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 612,318
Number of Sequences: 2352
Number of extensions: 10530
Number of successful extensions: 41
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 134069016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)