Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_C18
(1250 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 124 2e-28
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 124 2e-28
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 115 8e-26
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 115 8e-26
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 87 3e-17
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 87 3e-17
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 87 3e-17
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 74 2e-13
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 74 2e-13
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 61 1e-09
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 61 1e-09
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 61 1e-09
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 45 2e-09
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 45 2e-09
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 45 2e-09
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 50 3e-06
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 50 3e-06
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 49 6e-06
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 48 2e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 47 3e-05
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 47 3e-05
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 47 3e-05
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 47 3e-05
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 47 3e-05
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 47 3e-05
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 47 3e-05
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 47 3e-05
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 46 6e-05
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 46 7e-05
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 46 7e-05
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 46 7e-05
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 46 7e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 45 1e-04
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 45 1e-04
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 45 1e-04
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 44 2e-04
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 44 2e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 44 3e-04
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 44 3e-04
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 43 5e-04
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 43 5e-04
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 42 7e-04
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 42 7e-04
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 42 7e-04
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 42 0.001
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 41 0.002
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 41 0.002
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 41 0.002
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 41 0.002
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 41 0.002
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 40 0.003
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 40 0.003
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 40 0.004
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 40 0.004
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 40 0.005
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 39 0.006
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 39 0.009
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 38 0.011
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 38 0.020
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 36 0.045
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 36 0.045
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 36 0.045
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 36 0.045
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 36 0.045
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 36 0.060
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 36 0.060
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 36 0.060
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 36 0.079
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 36 0.079
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 35 0.14
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 35 0.14
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 35 0.14
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 35 0.14
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 35 0.14
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 34 0.18
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 34 0.18
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 34 0.24
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 34 0.24
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 34 0.24
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 33 0.56
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 33 0.56
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 33 0.56
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 33 0.56
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 1.3
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 31 1.3
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 31 1.3
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 31 1.3
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 31 2.3
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 31 2.3
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 30 3.0
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 30 3.9
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 30 3.9
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 30 3.9
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 29 5.2
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 29 5.2
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 29 6.9
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 29 6.9
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 124 bits (298), Expect = 2e-28
Identities = 63/159 (39%), Positives = 85/159 (53%), Gaps = 1/159 (0%)
Frame = +1
Query: 250 KLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAA 429
K+FVGG+S + L HF YGE+ VK D GRSRGFAF+ F +AA
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 430 GEHTINNXXXXXXXXXXRHGKX-FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQ 606
E TI R K FVGGL S+ S+ ++R+ F +FG + ++E PFDK
Sbjct: 90 REQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKA 149
Query: 607 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 723
R+ F FI FE E+ + K+T G +E DVK+A P+
Sbjct: 150 RRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 124 bits (298), Expect = 2e-28
Identities = 63/159 (39%), Positives = 85/159 (53%), Gaps = 1/159 (0%)
Frame = +1
Query: 250 KLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAA 429
K+FVGG+S + L HF YGE+ VK D GRSRGFAF+ F +AA
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 430 GEHTINNXXXXXXXXXXRHGKX-FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQ 606
E TI R K FVGGL S+ S+ ++R+ F +FG + ++E PFDK
Sbjct: 90 REQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKA 149
Query: 607 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 723
R+ F FI FE E+ + K+T G +E DVK+A P+
Sbjct: 150 RRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 115 bits (276), Expect = 8e-26
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Frame = +1
Query: 232 GRAXAXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSI 411
G K+F+GGLSW T + LR +FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 412 XKVMAAGEHTINNXXXXXXXXXXRH---------GKXFVGGLSSEISDDEIRNFFSEFGT 564
KV+ EH ++ + K F+GGLS+ + ++++ +F +G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGK 159
Query: 565 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 723
+ + + FDK + +GF F+TF+S++V + + + I GK V+ K+A PK
Sbjct: 160 VEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 115 bits (276), Expect = 8e-26
Identities = 58/173 (33%), Positives = 93/173 (53%), Gaps = 9/173 (5%)
Frame = +1
Query: 232 GRAXAXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSI 411
G K+F+GGLSW T + LR +FG +GE+ V DP T R+RGF FI F P S+
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSV 99
Query: 412 XKVMAAGEHTINNXXXXXXXXXXRH---------GKXFVGGLSSEISDDEIRNFFSEFGT 564
KV+ EH ++ + K F+GGLS+ + ++++ +F +G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGK 159
Query: 565 ILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 723
+ + + FDK + +GF F+TF+S++V + + + I GK V+ K+A PK
Sbjct: 160 VEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 86.6 bits (205), Expect = 3e-17
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 11/171 (6%)
Frame = +1
Query: 250 KLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAA 429
K+FVGGL+ T +R + +GEI I V DP T RSRGF F+ F + M
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 430 GEHTINNXXXXXXXXXXRHGK-----------XFVGGLSSEISDDEIRNFFSEFGTILEV 576
H I+ R K +V G+ + ++D + +F+++GT+ +
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 577 EMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 729
E+ DK + +GF F+TF+ V+ + + G DV++ K +
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 194
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 86.6 bits (205), Expect = 3e-17
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 11/171 (6%)
Frame = +1
Query: 250 KLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAA 429
K+FVGGL+ T +R + +GEI I V DP T RSRGF F+ F + M
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 430 GEHTINNXXXXXXXXXXRHGK-----------XFVGGLSSEISDDEIRNFFSEFGTILEV 576
H I+ R K +V G+ + ++D + +F+++GT+ +
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 577 EMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 729
E+ DK + +GF F+TF+ V+ + + G DV++ K +
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 194
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 86.6 bits (205), Expect = 3e-17
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 11/171 (6%)
Frame = +1
Query: 250 KLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAA 429
K+FVGGL+ T +R + +GEI I V DP T RSRGF F+ F + M
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 430 GEHTINNXXXXXXXXXXRHGK-----------XFVGGLSSEISDDEIRNFFSEFGTILEV 576
H I+ R K +V G+ + ++D + +F+++GT+ +
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 577 EMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 729
E+ DK + +GF F+TF+ V+ + + G DV++ K +
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 194
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 74.1 bits (174), Expect = 2e-13
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Frame = +1
Query: 295 LRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAAGEHTINNXXXXXXXX 474
+R + +GEI I V DP T RSRGF F+ F + M H I+
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 475 XXRHGKX-----------FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 621
R K +V G+ + ++D + +F+++GT+ + E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 622 FITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 729
F+TF+ V+ + + G DV++ K +
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 156
Score = 37.9 bits (84), Expect = 0.015
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +1
Query: 250 KLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAA 429
+L+V G+ T L +F YG + + D T + RGF F+ F S+ + +
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Query: 430 GEHTIN 447
H +N
Sbjct: 137 KSHMVN 142
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 74.1 bits (174), Expect = 2e-13
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 11/156 (7%)
Frame = +1
Query: 295 LRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAAGEHTINNXXXXXXXX 474
+R + +GEI I V DP T RSRGF F+ F + M H I+
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 475 XXRHGKX-----------FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFC 621
R K +V G+ + ++D + +F+++GT+ + E+ DK + +GF
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 622 FITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 729
F+TF+ V+ + + G DV++ K +
Sbjct: 121 FVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 156
Score = 37.9 bits (84), Expect = 0.015
Identities = 18/66 (27%), Positives = 30/66 (45%)
Frame = +1
Query: 250 KLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAA 429
+L+V G+ T L +F YG + + D T + RGF F+ F S+ + +
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Query: 430 GEHTIN 447
H +N
Sbjct: 137 KSHMVN 142
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 61.3 bits (142), Expect = 1e-09
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 669
K F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 670 PKRTIGGKEVDVKRATPK 723
+GGK VD KRA P+
Sbjct: 110 RPHKLGGKTVDSKRAIPR 127
Score = 54.8 bits (126), Expect = 1e-07
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 21/181 (11%)
Frame = +1
Query: 250 KLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAA 429
KLF+GGLS T + L +F +G + V DPNT SRGF F+ F + S M
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 430 GEHTINNXXXXXXXXXXRHG------------------KXFVGGLSSEI-SDDEIRNFFS 552
H + R K + G+++ + S D +R +F
Sbjct: 110 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 169
Query: 553 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVDVKRATPKP 726
FGT+ +VE+ Q +G F+ +E ++ + L + + + ++++V+ T P
Sbjct: 170 TFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHP 224
Query: 727 D 729
+
Sbjct: 225 N 225
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 61.3 bits (142), Expect = 1e-09
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 669
K F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 670 PKRTIGGKEVDVKRATPK 723
+GGK VD KRA P+
Sbjct: 130 RPHKLGGKTVDSKRAIPR 147
Score = 54.8 bits (126), Expect = 1e-07
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 21/181 (11%)
Frame = +1
Query: 250 KLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAA 429
KLF+GGLS T + L +F +G + V DPNT SRGF F+ F + S M
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 430 GEHTINNXXXXXXXXXXRHG------------------KXFVGGLSSEI-SDDEIRNFFS 552
H + R K + G+++ + S D +R +F
Sbjct: 130 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 189
Query: 553 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVDVKRATPKP 726
FGT+ +VE+ Q +G F+ +E ++ + L + + + ++++V+ T P
Sbjct: 190 TFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHP 244
Query: 727 D 729
+
Sbjct: 245 N 245
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 61.3 bits (142), Expect = 1e-09
Identities = 27/78 (34%), Positives = 45/78 (57%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 669
K F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 670 PKRTIGGKEVDVKRATPK 723
+GGK VD KRA P+
Sbjct: 131 RPHKLGGKTVDSKRAIPR 148
Score = 54.8 bits (126), Expect = 1e-07
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 21/181 (11%)
Frame = +1
Query: 250 KLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAA 429
KLF+GGLS T + L +F +G + V DPNT SRGF F+ F + S M
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 430 GEHTINNXXXXXXXXXXRHG------------------KXFVGGLSSEI-SDDEIRNFFS 552
H + R K + G+++ + S D +R +F
Sbjct: 131 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 190
Query: 553 EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL--KTPKRTIGGKEVDVKRATPKP 726
FGT+ +VE+ Q +G F+ +E ++ + L + + + ++++V+ T P
Sbjct: 191 TFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKHP 245
Query: 727 D 729
+
Sbjct: 246 N 246
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 45.2 bits (102), Expect(2) = 2e-09
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 484 HGKXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 663
H F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 664 K 666
+
Sbjct: 378 E 378
Score = 35.1 bits (77), Expect(2) = 2e-09
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Frame = +1
Query: 235 RAXAXKLFVGGLSWXPTXKXLRXHFGAYGEI-XXINVKXDPNT-GR-----SRGFAFIVF 393
R + K+FVGG+S K + FG +G + VK PN+ G+ S + F+V+
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVY 260
Query: 394 KAPXSIXKVMAAGEHTINN 450
S+ K+M+A N
Sbjct: 261 SDEQSVIKLMSACHRNSQN 279
Score = 34.3 bits (75), Expect = 0.18
Identities = 31/133 (23%), Positives = 48/133 (36%), Gaps = 8/133 (6%)
Frame = +1
Query: 304 HFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAAGEHTINNXXXXXXXXXXR 483
HFG++ + N + R K+ A HT+
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 484 HGKXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFES 639
K FVGG+S ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 640 EQVVNDLLKTPKR 678
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 45.2 bits (102), Expect(2) = 2e-09
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 484 HGKXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 663
H F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 664 K 666
+
Sbjct: 378 E 378
Score = 35.1 bits (77), Expect(2) = 2e-09
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Frame = +1
Query: 235 RAXAXKLFVGGLSWXPTXKXLRXHFGAYGEI-XXINVKXDPNT-GR-----SRGFAFIVF 393
R + K+FVGG+S K + FG +G + VK PN+ G+ S + F+V+
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVY 260
Query: 394 KAPXSIXKVMAAGEHTINN 450
S+ K+M+A N
Sbjct: 261 SDEQSVIKLMSACHRNSQN 279
Score = 34.3 bits (75), Expect = 0.18
Identities = 31/133 (23%), Positives = 48/133 (36%), Gaps = 8/133 (6%)
Frame = +1
Query: 304 HFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAAGEHTINNXXXXXXXXXXR 483
HFG++ + N + R K+ A HT+
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 484 HGKXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFES 639
K FVGG+S ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 640 EQVVNDLLKTPKR 678
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 45.2 bits (102), Expect(2) = 2e-09
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 484 HGKXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 663
H F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 664 K 666
+
Sbjct: 378 E 378
Score = 35.1 bits (77), Expect(2) = 2e-09
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Frame = +1
Query: 235 RAXAXKLFVGGLSWXPTXKXLRXHFGAYGEI-XXINVKXDPNT-GR-----SRGFAFIVF 393
R + K+FVGG+S K + FG +G + VK PN+ G+ S + F+V+
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVY 260
Query: 394 KAPXSIXKVMAAGEHTINN 450
S+ K+M+A N
Sbjct: 261 SDEQSVIKLMSACHRNSQN 279
Score = 34.3 bits (75), Expect = 0.18
Identities = 31/133 (23%), Positives = 48/133 (36%), Gaps = 8/133 (6%)
Frame = +1
Query: 304 HFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAAGEHTINNXXXXXXXXXXR 483
HFG++ + N + R K+ A HT+
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 484 HGKXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR--------KGFCFITFES 639
K FVGG+S ++ I FF +FGT+ V+ P + N R + F+ +
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGKSIAIGSYSYLFLVYSD 262
Query: 640 EQVVNDLLKTPKR 678
EQ V L+ R
Sbjct: 263 EQSVIKLMSACHR 275
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 50.4 bits (115), Expect = 3e-06
Identities = 44/166 (26%), Positives = 67/166 (40%), Gaps = 9/166 (5%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAAG 432
L+VG L L F A G + I V D T S G+A++ F+ P + M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 433 EHTINNXXXXXXXXXXRH--------GKXFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 588
+ R G F+ L I + I + FS FG IL ++
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 589 DKTKNQRKGFCFITFESEQVV-NDLLKTPKRTIGGKEVDVKRATPK 723
D+ KG+ F+ FE+E+ N + K + GK+V V + P+
Sbjct: 154 DE-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPR 198
Score = 35.9 bits (79), Expect = 0.060
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAP 402
L+V L L+ F +YG I V D N GRS+GF F+ F+ P
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKP 367
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 50.4 bits (115), Expect = 3e-06
Identities = 44/166 (26%), Positives = 67/166 (40%), Gaps = 9/166 (5%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAAG 432
L+VG L L F A G + I V D T S G+A++ F+ P + M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 433 EHTINNXXXXXXXXXXRH--------GKXFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 588
+ R G F+ L I + I + FS FG IL ++
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 589 DKTKNQRKGFCFITFESEQVV-NDLLKTPKRTIGGKEVDVKRATPK 723
D+ KG+ F+ FE+E+ N + K + GK+V V + P+
Sbjct: 154 DE-DGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPR 198
Score = 35.9 bits (79), Expect = 0.060
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAP 402
L+V L L+ F +YG I V D N GRS+GF F+ F+ P
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKP 367
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 49.2 bits (112), Expect = 6e-06
Identities = 37/168 (22%), Positives = 70/168 (41%), Gaps = 9/168 (5%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAAG 432
L V G+ + T + + +F G + +K + G S+GF F+ + KV+A
Sbjct: 175 LIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSD-GNSKGFGFVRMSSVGEQNKVLAIP 233
Query: 433 EHTINNXXXXXXXXXXRH-------GKXFVGGLSSEISDDEIRNFFS-EFGTILEVEMPF 588
+H I+ R + FVG L+ ++ + ++R F E + +E +
Sbjct: 234 QHMIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVT 293
Query: 589 DK-TKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 729
D +GF F+T S + ++ T+ G V + A P+ +
Sbjct: 294 DVFIPKPFRGFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPREE 341
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 47.6 bits (108), Expect = 2e-05
Identities = 23/75 (30%), Positives = 36/75 (48%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 669
K FVGGL SD + +F +FG I E + D+ + +G+ F+T + K
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 670 PKRTIGGKEVDVKRA 714
P I G++ +V A
Sbjct: 96 PNPIIDGRKANVNLA 110
Score = 44.4 bits (100), Expect = 2e-04
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = +1
Query: 250 KLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFK 396
K+FVGGL + + K L +F +G+I V D NT +SRG+ F+ K
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMK 84
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 46.8 bits (106), Expect = 3e-05
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 645
FVG +S ++S+D IR+ FS+ G +L ++M D+ + KG+ FI F Q
Sbjct: 21 FVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQ 70
Score = 34.7 bits (76), Expect = 0.14
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF 393
+FVG +S+ + +R F G + I + D TG+ +G+ FI F
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 46.8 bits (106), Expect = 3e-05
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 9/139 (6%)
Frame = +1
Query: 244 AXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF-------KAP 402
A K+FVG + R F YG + N+ D +T S+G F+ F +A
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 403 XSI--XKVMAAGEHTINNXXXXXXXXXXRHGKXFVGGLSSEISDDEIRNFFSEFGTILEV 576
++ KV+ H + R K F+G LS + +++ +R F++FG I +
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 577 EMPFDKTKNQRKGFCFITF 633
+ D+ R G F+TF
Sbjct: 172 SVLRDQDGKSR-GCAFVTF 189
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 46.8 bits (106), Expect = 3e-05
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 9/139 (6%)
Frame = +1
Query: 244 AXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF-------KAP 402
A K+FVG + R F YG + N+ D +T S+G F+ F +A
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 403 XSI--XKVMAAGEHTINNXXXXXXXXXXRHGKXFVGGLSSEISDDEIRNFFSEFGTILEV 576
++ KV+ H + R K F+G LS + +++ +R F++FG I +
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 577 EMPFDKTKNQRKGFCFITF 633
+ D+ R G F+TF
Sbjct: 172 SVLRDQDGKSR-GCAFVTF 189
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 46.8 bits (106), Expect = 3e-05
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 9/139 (6%)
Frame = +1
Query: 244 AXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF-------KAP 402
A K+FVG + R F YG + N+ D +T S+G F+ F +A
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 403 XSI--XKVMAAGEHTINNXXXXXXXXXXRHGKXFVGGLSSEISDDEIRNFFSEFGTILEV 576
++ KV+ H + R K F+G LS + +++ +R F++FG I +
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 577 EMPFDKTKNQRKGFCFITF 633
+ D+ R G F+TF
Sbjct: 172 SVLRDQDGKSR-GCAFVTF 189
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 46.8 bits (106), Expect = 3e-05
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 9/139 (6%)
Frame = +1
Query: 244 AXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF-------KAP 402
A K+FVG + R F YG + N+ D +T S+G F+ F +A
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 403 XSI--XKVMAAGEHTINNXXXXXXXXXXRHGKXFVGGLSSEISDDEIRNFFSEFGTILEV 576
++ KV+ H + R K F+G LS + +++ +R F++FG I +
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 577 EMPFDKTKNQRKGFCFITF 633
+ D+ R G F+TF
Sbjct: 172 SVLRDQDGKSR-GCAFVTF 189
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 46.8 bits (106), Expect = 3e-05
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 9/139 (6%)
Frame = +1
Query: 244 AXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF-------KAP 402
A K+FVG + R F YG + N+ D +T S+G F+ F +A
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 403 XSI--XKVMAAGEHTINNXXXXXXXXXXRHGKXFVGGLSSEISDDEIRNFFSEFGTILEV 576
++ KV+ H + R K F+G LS + +++ +R F++FG I +
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 577 EMPFDKTKNQRKGFCFITF 633
+ D+ R G F+TF
Sbjct: 172 SVLRDQDGKSR-GCAFVTF 189
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 46.8 bits (106), Expect = 3e-05
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 9/139 (6%)
Frame = +1
Query: 244 AXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF-------KAP 402
A K+FVG + R F YG + N+ D +T S+G F+ F +A
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 403 XSI--XKVMAAGEHTINNXXXXXXXXXXRHGKXFVGGLSSEISDDEIRNFFSEFGTILEV 576
++ KV+ H + R K F+G LS + +++ +R F++FG I +
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 577 EMPFDKTKNQRKGFCFITF 633
+ D+ R G F+TF
Sbjct: 172 SVLRDQDGKSR-GCAFVTF 189
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 46.8 bits (106), Expect = 3e-05
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 481 RHGKXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 657
RH FVG L SEI ++R F +FG + E ++ D N+ KG+ F+++ E
Sbjct: 130 RHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERA 189
Query: 658 LLKTPKRTIGGKEVDVKRATPKPD 729
+ + +G + + AT KPD
Sbjct: 190 IDEMNGAWLGRRTIRTNWATRKPD 213
Score = 31.1 bits (67), Expect = 1.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF 393
+FVG L LR F +GE+ + D NT + +G+ F+ +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSY 180
Score = 31.1 bits (67), Expect = 1.7
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 672
+VG +++ + +DEIR F FG I EV + +G+ F+ FE+ E +++
Sbjct: 259 YVGNIAN-LGEDEIRRAFDRFGPINEVR------TFKIQGYAFVKFETKESAARAIVQMN 311
Query: 673 KRTIGGKEV 699
IGG+ V
Sbjct: 312 NADIGGQIV 320
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 46.0 bits (104), Expect = 6e-05
Identities = 19/48 (39%), Positives = 32/48 (66%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFK 396
+++GGLS+ + + F YGE+ IN+ D +TG+S+GFAF+ +K
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYK 87
Score = 41.5 bits (93), Expect = 0.001
Identities = 14/50 (28%), Positives = 32/50 (64%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 645
++GGLS +S+ ++ FS++G ++ + + DK + KGF F+ ++ ++
Sbjct: 41 YIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQR 90
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 45.6 bits (103), Expect = 7e-05
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 481 RHGKXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 657
RH FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 79
Query: 658 LLKTPKRTIGGKEVDVKRATPKP 726
+ + + +G + + AT KP
Sbjct: 80 IEQMNGQWLGRRTIRTNWATRKP 102
Score = 35.1 bits (77), Expect = 0.10
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF 393
+FVG LS + LR F +G++ V D NT +S+G+ F+ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 70
Score = 32.7 bits (71), Expect = 0.56
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 672
+VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 131 YVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMN 183
Query: 673 KRTIGGKEV 699
+ +GG+ V
Sbjct: 184 NQDVGGQLV 192
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 45.6 bits (103), Expect = 7e-05
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 481 RHGKXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 657
RH FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 89
Query: 658 LLKTPKRTIGGKEVDVKRATPKP 726
+ + + +G + + AT KP
Sbjct: 90 IEQMNGQWLGRRTIRTNWATRKP 112
Score = 35.1 bits (77), Expect = 0.10
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF 393
+FVG LS + LR F +G++ V D NT +S+G+ F+ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 80
Score = 32.7 bits (71), Expect = 0.56
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 672
+VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 141 YVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMN 193
Query: 673 KRTIGGKEV 699
+ +GG+ V
Sbjct: 194 NQDVGGQLV 202
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 45.6 bits (103), Expect = 7e-05
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 481 RHGKXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 657
RH FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 133 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 192
Query: 658 LLKTPKRTIGGKEVDVKRATPKP 726
+ + + +G + + AT KP
Sbjct: 193 IEQMNGQWLGRRTIRTNWATRKP 215
Score = 35.1 bits (77), Expect = 0.10
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF 393
+FVG LS + LR F +G++ V D NT +S+G+ F+ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 183
Score = 32.7 bits (71), Expect = 0.56
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 672
+VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 244 YVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMN 296
Query: 673 KRTIGGKEV 699
+ +GG+ V
Sbjct: 297 NQDVGGQLV 305
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 45.6 bits (103), Expect = 7e-05
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 481 RHGKXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 657
RH FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 160
Query: 658 LLKTPKRTIGGKEVDVKRATPKP 726
+ + + +G + + AT KP
Sbjct: 161 IEQMNGQWLGRRTIRTNWATRKP 183
Score = 35.1 bits (77), Expect = 0.10
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF 393
+FVG LS + LR F +G++ V D NT +S+G+ F+ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 151
Score = 32.7 bits (71), Expect = 0.56
Identities = 19/69 (27%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 672
+VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 212 YVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQMN 264
Query: 673 KRTIGGKEV 699
+ +GG+ V
Sbjct: 265 NQDVGGQLV 273
Score = 31.1 bits (67), Expect = 1.7
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 600
+VG L S +++D I F++ G++ + ++ FD+ K
Sbjct: 49 YVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 45.2 bits (102), Expect = 1e-04
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 666
+ FVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 125
Query: 667 TPKR 678
TPK+
Sbjct: 126 TPKQ 129
Score = 31.9 bits (69), Expect = 0.98
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 250 KLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFK 396
++FVGG T LR HF + + + + + G+S+G+ FI F+
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFE 114
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 45.2 bits (102), Expect = 1e-04
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 484 HGKXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 663
H F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 163
Query: 664 K 666
+
Sbjct: 164 E 164
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 45.2 bits (102), Expect = 1e-04
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 666
+ FVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 126
Query: 667 TPKR 678
TPK+
Sbjct: 127 TPKQ 130
Score = 31.9 bits (69), Expect = 0.98
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 250 KLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFK 396
++FVGG T LR HF + + + + + G+S+G+ FI F+
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFE 115
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 44.4 bits (100), Expect = 2e-04
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 672
+V + +++DD +R+ FS FGTI ++ D+ + KGF F+ FE E+ +
Sbjct: 346 YVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDMN 404
Query: 673 KRTIGGKEVDVKRATPKPD 729
+ IG K + V A K D
Sbjct: 405 SKMIGAKPLYVALAQRKED 423
Score = 43.2 bits (97), Expect = 4e-04
Identities = 39/162 (24%), Positives = 66/162 (40%), Gaps = 15/162 (9%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAAG 432
L++G L + L F G + I V D + S G+A++ F+ P + +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 433 EHTINNXXXXXXXXXXR--------HGKXFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 588
+ + R +G F+ L I + + + FS FG IL ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 589 DKTKNQRKGFCFITFESE-------QVVNDLLKTPKRTIGGK 693
D N KG+ F+ FE+E + VN +L + K+ GK
Sbjct: 179 DDEGNS-KGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGK 219
Score = 38.7 bits (86), Expect = 0.009
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +1
Query: 235 RAXAXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAP 402
R L+V + LR HF ++G I V D N GRS+GF F+ F+ P
Sbjct: 339 RYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKP 393
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 44.4 bits (100), Expect = 2e-04
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 672
+V + +++DD +R+ FS FGTI ++ D+ + KGF F+ FE E+ +
Sbjct: 346 YVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDMN 404
Query: 673 KRTIGGKEVDVKRATPKPD 729
+ IG K + V A K D
Sbjct: 405 SKMIGAKPLYVALAQRKED 423
Score = 43.2 bits (97), Expect = 4e-04
Identities = 39/162 (24%), Positives = 66/162 (40%), Gaps = 15/162 (9%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAAG 432
L++G L + L F G + I V D + S G+A++ F+ P + +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 433 EHTINNXXXXXXXXXXR--------HGKXFVGGLSSEISDDEIRNFFSEFGTILEVEMPF 588
+ + R +G F+ L I + + + FS FG IL ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 589 DKTKNQRKGFCFITFESE-------QVVNDLLKTPKRTIGGK 693
D N KG+ F+ FE+E + VN +L + K+ GK
Sbjct: 179 DDEGNS-KGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGK 219
Score = 38.7 bits (86), Expect = 0.009
Identities = 20/56 (35%), Positives = 27/56 (48%)
Frame = +1
Query: 235 RAXAXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAP 402
R L+V + LR HF ++G I V D N GRS+GF F+ F+ P
Sbjct: 339 RYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKP 393
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +1
Query: 223 EAPGRAXAXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAP 402
EA + +++ + W L +F YG I +N+ DP+TG RGFA I F +
Sbjct: 17 EARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSK 76
Query: 403 XSIXKVMAAGEHTIN 447
K + H I+
Sbjct: 77 DGANKAIEQRPHVID 91
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/63 (30%), Positives = 32/63 (50%)
Frame = +1
Query: 532 EIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKR 711
++ ++F +G+I V M +D +GF ITF+S+ N ++ I G VDV+
Sbjct: 40 QLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQRPHVIDGDRVDVEP 99
Query: 712 ATP 720
P
Sbjct: 100 YIP 102
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 44.0 bits (99), Expect = 2e-04
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 499 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 639
V L E+++DE+R+ F + G ++ + + DK KGF F+TFES
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
Score = 32.7 bits (71), Expect = 0.56
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 295 LRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMA 426
LR FG G + I + D TG +GFAF+ F++ + +A
Sbjct: 192 LRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIA 235
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 44.0 bits (99), Expect = 2e-04
Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 5/142 (3%)
Frame = +1
Query: 250 KLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF-KAPXSIXKVMA 426
+++VG + L F G+I + + DP +G SRG+AF+ + +
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKT 260
Query: 427 AGEHTINNXXXXXXXXXXRHGKXFVGGLSSEISDDEI----RNFFSEFGTILEVEMPFDK 594
H I+ + + F+G + S DEI + ++ +P D
Sbjct: 261 YDGHEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEILEELKTHAEGVVDVIVYSVP-DN 319
Query: 595 TKNQRKGFCFITFESEQVVNDL 660
K + +GFCF+ F + +D+
Sbjct: 320 EKIKNRGFCFVDFIDHKTASDI 341
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 43.6 bits (98), Expect = 3e-04
Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 8/146 (5%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXS-------I 411
++VGGL + L G + +N+ D T +GF F+ F +
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 412 XKVMAAGEHTINNXXXXXXXXXXRHGKXFVGGLSSEISDDEIRNFFSEFGTILEV-EMPF 588
+ G+ N FVG L E+ + + + FS FG IL+V ++
Sbjct: 75 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMR 134
Query: 589 DKTKNQRKGFCFITFESEQVVNDLLK 666
D KGF FI F S + + L+
Sbjct: 135 DVDSGTSKGFAFINFASFEASDTALE 160
Score = 39.9 bits (89), Expect = 0.004
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 675
+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 16 YVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILN 75
Query: 676 R-TIGGKEVDVKRAT 717
+ GK + V +A+
Sbjct: 76 MIKLYGKPIKVNKAS 90
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 43.6 bits (98), Expect = 3e-04
Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 8/146 (5%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXS-------I 411
++VGGL + L G + +N+ D T +GF F+ F +
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 412 XKVMAAGEHTINNXXXXXXXXXXRHGKXFVGGLSSEISDDEIRNFFSEFGTILEV-EMPF 588
+ G+ N FVG L E+ + + + FS FG IL+V ++
Sbjct: 85 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMR 144
Query: 589 DKTKNQRKGFCFITFESEQVVNDLLK 666
D KGF FI F S + + L+
Sbjct: 145 DVDSGTSKGFAFINFASFEASDTALE 170
Score = 39.9 bits (89), Expect = 0.004
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 675
+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 26 YVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKILN 85
Query: 676 R-TIGGKEVDVKRAT 717
+ GK + V +A+
Sbjct: 86 MIKLYGKPIKVNKAS 100
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 42.7 bits (96), Expect = 5e-04
Identities = 17/55 (30%), Positives = 36/55 (65%)
Frame = +1
Query: 481 RHGKXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 645
+H FVG LS ++S++ +++ F++FG + E ++ D + KG+ F++F ++Q
Sbjct: 133 KHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQ 187
Score = 38.7 bits (86), Expect = 0.009
Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAA- 429
+FVG LS + + L+ F +GE+ V D T +S+G+ F+ F + +A
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 430 -----GEHTINNXXXXXXXXXXRHGK----------------XFVGGLSSEISDDEIRNF 546
G+ + K +VG +S + +D ++R+
Sbjct: 197 NGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDL 256
Query: 547 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ-VVNDLLKTPKRTIGGKEV 699
FS +G I EV + K QR + F+ +E ++ +++ + + G +V
Sbjct: 257 FSTYGDIAEVRI----FKTQR--YAFVRYEKKECATKAIMEMNGKEMAGNQV 302
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 42.7 bits (96), Expect = 5e-04
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +1
Query: 223 EAPGRAXAXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAP 402
E + A ++VG + W T + HF G++ + + D TG + FAF+ F+
Sbjct: 38 EEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKL 97
Query: 403 XSI 411
S+
Sbjct: 98 ESV 100
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 42.3 bits (95), Expect = 7e-04
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 250 KLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAP 402
+++VG +S+ LR F +G I IN+ DP TG + FAF+ ++ P
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVP 153
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 42.3 bits (95), Expect = 7e-04
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 250 KLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAP 402
+++VG +S+ LR F +G I IN+ DP TG + FAF+ ++ P
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVP 153
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 42.3 bits (95), Expect = 7e-04
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 250 KLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAP 402
+++VG +S+ LR F +G I IN+ DP TG + FAF+ ++ P
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVP 153
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 41.5 bits (93), Expect = 0.001
Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 9/131 (6%)
Frame = +1
Query: 244 AXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF-------KAP 402
A K+FVG + R F YG + N+ D +T S+G F+ F +A
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Query: 403 XSI--XKVMAAGEHTINNXXXXXXXXXXRHGKXFVGGLSSEISDDEIRNFFSEFGTILEV 576
++ KV+ H + R K F+G LS + +++ +R F++FG I +
Sbjct: 114 GALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDC 171
Query: 577 EMPFDKTKNQR 609
+ D+ R
Sbjct: 172 SVLRDQDGKSR 182
Score = 38.7 bits (86), Expect = 0.009
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 633
K FVG + + ++ + R F ++G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 41.1 bits (92), Expect = 0.002
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 15/146 (10%)
Frame = +1
Query: 244 AXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVM 423
A KLFVG + K LR F +G+I + D TG +G AF+ + S +
Sbjct: 28 AIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQ 87
Query: 424 AA--GEHTI-------------NNXXXXXXXXXXRHGKXFVGGLSSEISDDEIRNFFSEF 558
A + T+ + K F+G LS + S+DE+R F+ F
Sbjct: 88 ATLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATF 147
Query: 559 GTILEVEMPFDKTKNQRKGFCFITFE 636
G + EV + KG F+ ++
Sbjct: 148 GELDEVTV-LRGADGASKGCAFVKYK 172
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 41.1 bits (92), Expect = 0.002
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 15/146 (10%)
Frame = +1
Query: 244 AXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVM 423
A KLFVG + K LR F +G+I + D TG +G AF+ + S +
Sbjct: 28 AIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQ 87
Query: 424 AA--GEHTI-------------NNXXXXXXXXXXRHGKXFVGGLSSEISDDEIRNFFSEF 558
A + T+ + K F+G LS + S+DE+R F+ F
Sbjct: 88 ATLHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATF 147
Query: 559 GTILEVEMPFDKTKNQRKGFCFITFE 636
G + EV + KG F+ ++
Sbjct: 148 GELDEVTV-LRGADGASKGCAFVKYK 172
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 645
++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 110 YIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 159
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 40.7 bits (91), Expect = 0.002
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 645
++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 84 YIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 133
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 40.7 bits (91), Expect = 0.002
Identities = 30/145 (20%), Positives = 57/145 (39%), Gaps = 6/145 (4%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAA- 429
L + L T + +R F + GEI + D TG+S G+ F+ + + +++
Sbjct: 44 LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSF 103
Query: 430 -----GEHTINNXXXXXXXXXXRHGKXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 594
TI + +V G+ ++ E+ + F FG I+ + D
Sbjct: 104 NGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDN 163
Query: 595 TKNQRKGFCFITFESEQVVNDLLKT 669
KG F+ F+ + + +KT
Sbjct: 164 VTGLSKGVGFVRFDKKDEADVAIKT 188
Score = 40.3 bits (90), Expect = 0.003
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKTP 672
FV LSS+ D + FS+FG I+ V++ D T+ Q KG+ F++ + + N +L
Sbjct: 377 FVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSNYTEAYNAMLSLN 435
Query: 673 KRTIGGKEVDV--KRATP 720
+ GK + V K +TP
Sbjct: 436 GTNLAGKTLQVVFKSSTP 453
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 40.3 bits (90), Expect = 0.003
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF 393
++VG + + T + + +F A G + + + D TGR RGFAF+ F
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
Score = 37.5 bits (83), Expect = 0.020
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 642
+VG + + +++EI N+F+ G + V + +D+ + +GF F+ F E
Sbjct: 9 YVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 40.3 bits (90), Expect = 0.003
Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 14/179 (7%)
Frame = +1
Query: 226 APGRAXAXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGR-SRGFAFIVF--- 393
APG A +FV L + T +R A + I N+ RGFA++V
Sbjct: 586 APGTEDARTIFVSNLDFTTTEDEIRQ---AIEGVASIRFARKANSDLVHRGFAYVVMEND 642
Query: 394 -KAPXSIXK--------VMAAGEHTINNXXXXXXXXXXRHGKXFVGGLSSEISDDEIRNF 546
KA ++ K M + K FV + + +DDE++
Sbjct: 643 QKAQQALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKAL 702
Query: 547 FSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT-PKRTIGGKEVDVKRATP 720
FS+FGT+ V K + KG F+ F++E + + K + +E++V + P
Sbjct: 703 FSKFGTVTSVRRVTHK-DGKPKGIAFVDFDTEASAQKCVASGDKLMLRERELEVALSNP 760
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 40.3 bits (90), Expect = 0.003
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFS-EFGTILEVEMPFDKTKNQRKGFCFITFESEQVVN 654
FVG L EI++D + FFS + G + V + DK + KGF F+ F+ + V+
Sbjct: 249 FVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS 302
Score = 37.9 bits (84), Expect = 0.015
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAY-GEIXXINVKXDPNTGRSRGFAFIVFKAPXSI 411
+FVG L + T L F A G + + + D +TG+ +GFAF+ FK S+
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSV 301
Score = 30.3 bits (65), Expect = 3.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEM 582
FVG + +++ +R FS+FGTI V M
Sbjct: 146 FVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 40.3 bits (90), Expect = 0.003
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 675
FV + E ++D++ + FSE+G I + + D+ KG+ + +E+++ N+ +
Sbjct: 58 FVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQSN 117
Query: 676 RT-IGGKEVDV 705
T + G+ V V
Sbjct: 118 DTDLLGQNVKV 128
Score = 29.1 bits (62), Expect = 6.9
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFK 396
+FV + T + F YG+I I++ D TG +G+A + ++
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYE 104
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 39.9 bits (89), Expect = 0.004
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVM 423
++VG + T + L F + G+I + + D TGR RGFAFI F S + +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
Score = 39.1 bits (87), Expect = 0.006
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 642
+VG + +++E+ NFFS G I V + D+ + +GF FI F E
Sbjct: 8 YVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEE 56
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 39.9 bits (89), Expect = 0.004
Identities = 16/68 (23%), Positives = 32/68 (47%)
Frame = +1
Query: 223 EAPGRAXAXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAP 402
E A A ++VG + + T + + HF G + + ++ D +G +GFA++ F
Sbjct: 70 EEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEK 129
Query: 403 XSIXKVMA 426
+ +A
Sbjct: 130 EGMQNALA 137
Score = 35.5 bits (78), Expect = 0.079
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPK 675
+VG + + +EI F G++ V + D+ KGF ++ F ++ + + L
Sbjct: 81 YVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALAMTD 140
Query: 676 RTIGGKEVDV-KRATPKP 726
+ G+++ V + T KP
Sbjct: 141 SLLRGRQIKVDPKRTNKP 158
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 39.5 bits (88), Expect = 0.005
Identities = 22/47 (46%), Positives = 26/47 (55%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF 393
L V LS T K LR FG +GEI ++ D +G SRGF FI F
Sbjct: 78 LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
Score = 36.3 bits (80), Expect = 0.045
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 499 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 633
V LSS ++ ++R+ F EFG I + ++ +D+ +GF FI F
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 39.1 bits (87), Expect = 0.006
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE-SEQVVNDLLKTP 672
+VGG + ++++ + F FG ++ + +P D + +GF F+ F+ +E +
Sbjct: 14 YVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNMN 73
Query: 673 KRTIGGKEVDVKRATP 720
+ + GK + V A P
Sbjct: 74 ESELFGKTIRVNFARP 89
Score = 38.7 bits (86), Expect = 0.009
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF 393
L+VGG + T K L F +G++ I++ D +G+ RGF F+ F
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEF 59
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 38.7 bits (86), Expect = 0.009
Identities = 17/79 (21%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLK 666
+ F G L +E+SD+ + F ++ + + ++ + N+ KG+ F++F +SE V + +
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 667 TPKRTIGGKEVDVKRATPK 723
+ +G + + ++++ K
Sbjct: 264 MDGKYVGNRPIKLRKSAWK 282
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 38.3 bits (85), Expect = 0.011
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 642
+VG + ++D++ N+FS+ G + V + D+ + +GF F+ F E
Sbjct: 7 YVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEE 55
Score = 37.1 bits (82), Expect = 0.026
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF 393
++VG + T L +F G + + + D TGR RGFAF+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 37.5 bits (83), Expect = 0.020
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF 393
LFVG +++ + LR F AYG+I + + D G+ RG+AFI +
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFIEY 151
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 36.3 bits (80), Expect = 0.045
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 250 KLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAA 429
+LF+ L + L+ F YGE+ + V D TG +GFA + F P + +A
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSA 339
Score = 34.3 bits (75), Expect = 0.18
Identities = 22/67 (32%), Positives = 30/67 (44%)
Frame = +1
Query: 250 KLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAA 429
+L V L T + LR F YG+I ++K G+ RGFAF+ F S +A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAK 62
Query: 430 GEHTINN 450
T N
Sbjct: 63 SNQTFFN 69
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 36.3 bits (80), Expect = 0.045
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +1
Query: 226 APGRAXAXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF 393
AP L + LS+ T LR F YG+I +++ D + +S+GF F+ F
Sbjct: 12 APDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 36.3 bits (80), Expect = 0.045
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +1
Query: 226 APGRAXAXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF 393
AP L + LS+ T LR F YG+I +++ D + +S+GF F+ F
Sbjct: 12 APDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 36.3 bits (80), Expect = 0.045
Identities = 33/139 (23%), Positives = 51/139 (36%), Gaps = 22/139 (15%)
Frame = +1
Query: 289 KXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF------------------KAPXSIX 414
+ L F A G + + + D TGRS+G ++ F AP I
Sbjct: 39 RDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQ 98
Query: 415 KVMAAGEHTINNXXXXXXXXXXRHGK----XFVGGLSSEISDDEIRNFFSEFGTILEVEM 582
+ A N+ K V L +I + IR+ F FG I ++++
Sbjct: 99 RTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDL 158
Query: 583 PFDKTKNQRKGFCFITFES 639
D + R GF ITF +
Sbjct: 159 EVDSNRENR-GFATITFRN 176
Score = 31.9 bits (69), Expect = 0.98
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +1
Query: 532 EIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKR 711
++ FFS G + +V + D + KG C++ F E+ V L + + G + ++R
Sbjct: 40 DLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQR 99
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 36.3 bits (80), Expect = 0.045
Identities = 33/139 (23%), Positives = 51/139 (36%), Gaps = 22/139 (15%)
Frame = +1
Query: 289 KXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVF------------------KAPXSIX 414
+ L F A G + + + D TGRS+G ++ F AP I
Sbjct: 184 RDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQ 243
Query: 415 KVMAAGEHTINNXXXXXXXXXXRHGK----XFVGGLSSEISDDEIRNFFSEFGTILEVEM 582
+ A N+ K V L +I + IR+ F FG I ++++
Sbjct: 244 RTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDL 303
Query: 583 PFDKTKNQRKGFCFITFES 639
D + R GF ITF +
Sbjct: 304 EVDSNRENR-GFATITFRN 321
Score = 31.9 bits (69), Expect = 0.98
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +1
Query: 532 EIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKR 711
++ FFS G + +V + D + KG C++ F E+ V L + + G + ++R
Sbjct: 185 DLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQR 244
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 35.9 bits (79), Expect = 0.060
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 645
+VG LS +D++ F G + V M D+ K GFCF+ + + +
Sbjct: 40 YVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE 89
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 35.9 bits (79), Expect = 0.060
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAP 402
L+V L L+ F +YG I V D N GRS+GF F+ F+ P
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKP 307
Score = 30.3 bits (65), Expect = 3.0
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVM 423
L+VG L L F A G + I V D T S G+A++ F+ P + M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 35.9 bits (79), Expect = 0.060
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAP 402
L+V L L+ F +YG I V D N GRS+GF F+ F+ P
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKP 304
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 35.5 bits (78), Expect = 0.079
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +1
Query: 244 AXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVM 423
A +F+G + + T + + HF G+I + D T + + FA+I F SI +
Sbjct: 54 AKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 113
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 35.5 bits (78), Expect = 0.079
Identities = 17/59 (28%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRNFFSEFGTILEVEMPF-DKTKNQRKGFCFITFESEQVVNDLL 663
+ +VGG S+ +S ++IRN ++ EV + + + +GF F+ S N LL
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLL 68
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 34.7 bits (76), Expect = 0.14
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 6/115 (5%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAAG 432
LFVG + + +R F +G++ +++K NT + +AF++F+ + A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAA--YAFVMFQTVDQA--IQAKA 226
Query: 433 EHTINNXXXXXXXXXXRHGKX------FVGGLSSEISDDEIRNFFSEFGTILEVE 579
E +GK FVGGL S + ++ F EFG + ++
Sbjct: 227 EEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
Score = 33.9 bits (74), Expect = 0.24
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLKT 669
FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 172 FVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAEE 228
Query: 670 PKRTI--GGKEVDV 705
R I GG + +
Sbjct: 229 QDRPIRAGGSRMKI 242
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 34.7 bits (76), Expect = 0.14
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 6/115 (5%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAAG 432
LFVG + + +R F +G++ +++K NT + +AF++F+ + A
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAA--YAFVMFQTVDQA--IQAKA 226
Query: 433 EHTINNXXXXXXXXXXRHGKX------FVGGLSSEISDDEIRNFFSEFGTILEVE 579
E +GK FVGGL S + ++ F EFG + ++
Sbjct: 227 EEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 281
Score = 33.9 bits (74), Expect = 0.24
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLKT 669
FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 172 FVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAEE 228
Query: 670 PKRTI--GGKEVDV 705
R I GG + +
Sbjct: 229 QDRPIRAGGSRMKI 242
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 34.7 bits (76), Expect = 0.14
Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 6/115 (5%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVMAAG 432
LFVG + + +R F +G++ +++K NT + +AF++F+ + A
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAA--YAFVMFQTVDQA--IQAKA 203
Query: 433 EHTINNXXXXXXXXXXRHGKX------FVGGLSSEISDDEIRNFFSEFGTILEVE 579
E +GK FVGGL S + ++ F EFG + ++
Sbjct: 204 EEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENID 258
Score = 33.9 bits (74), Expect = 0.24
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLKT 669
FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 149 FVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAEE 205
Query: 670 PKRTI--GGKEVDV 705
R I GG + +
Sbjct: 206 QDRPIRAGGSRMKI 219
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 34.7 bits (76), Expect = 0.14
Identities = 21/74 (28%), Positives = 38/74 (51%)
Frame = +1
Query: 505 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 684
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 685 GGKEVDVKRATPKP 726
G + ++V A P
Sbjct: 68 GSRYIEVFPAGGAP 81
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 34.7 bits (76), Expect = 0.14
Identities = 21/74 (28%), Positives = 38/74 (51%)
Frame = +1
Query: 505 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 684
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 685 GGKEVDVKRATPKP 726
G + ++V A P
Sbjct: 68 GSRYIEVFPAGGAP 81
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 34.3 bits (75), Expect = 0.18
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +1
Query: 244 AXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFKAPXSIXKVM 423
A +F+G + + T + + HF G I + D T + + FA+I F SI +
Sbjct: 60 AKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL 119
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 34.3 bits (75), Expect = 0.18
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRNFFSEFGTILEVEMP 585
K FVGGL S + + +I NFFS +G L+V+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 33.9 bits (74), Expect = 0.24
Identities = 19/79 (24%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 669
+ ++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 670 PK-RTIGGKEVDVKRATPK 723
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 33.9 bits (74), Expect = 0.24
Identities = 19/79 (24%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 669
+ ++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 670 PK-RTIGGKEVDVKRATPK 723
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 33.9 bits (74), Expect = 0.24
Identities = 19/79 (24%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 669
+ ++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 670 PK-RTIGGKEVDVKRATPK 723
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 32.7 bits (71), Expect = 0.56
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 633
K F+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 32.7 bits (71), Expect = 0.56
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 633
K F+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 32.7 bits (71), Expect = 0.56
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 633
K F+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 313
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 32.7 bits (71), Expect = 0.56
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 633
K F+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 316
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 31.5 bits (68), Expect = 1.3
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRN------FFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVV 651
K F+GGL + +I F E ++ + D+ KGF ++TFE+EQ +
Sbjct: 7 KAFIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQM 66
Query: 652 NDLLK-TPKRTIGGKEVDVKRA 714
N + G + + V RA
Sbjct: 67 NTAISGLNGADFGNRVLKVNRA 88
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 666
K +VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 666
K +VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 666
K +VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 30.7 bits (66), Expect = 2.3
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 672
FVG +S + SD+ IR +E G + + K Q GFC T + E + L
Sbjct: 50 FVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFT-DLEGTLRALRILH 108
Query: 673 KRTIGGKEVDVK 708
+ +G K++ VK
Sbjct: 109 EFHLGDKKLTVK 120
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 30.7 bits (66), Expect = 2.3
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 672
FVG +S + SD+ IR +E G + + K Q GFC T + E + L
Sbjct: 50 FVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFT-DLEGTLRALRILH 108
Query: 673 KRTIGGKEVDVK 708
+ +G K++ VK
Sbjct: 109 EFHLGDKKLTVK 120
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 30.3 bits (65), Expect = 3.0
Identities = 9/41 (21%), Positives = 24/41 (58%)
Frame = +1
Query: 526 DDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQV 648
+ E+ +F +FG +L + + ++ KG+ ++ F+++ V
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAV 85
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 29.9 bits (64), Expect = 3.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 677 LLGVLSKSFTTCSDSNVMKQKPFLWFFVLSKGISTSKI 564
L+G L S+ ++ PF +FF+ S+G STSKI
Sbjct: 156 LIGALWNYVFVLSNVSLFVLLPFSYFFIESQGFSTSKI 193
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 232 GRAXAXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFK 396
G + K++VG L K + F YG I +++K +GR FAF+ F+
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFE 54
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 232 GRAXAXKLFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFK 396
G + K++VG L K + F YG I +++K +GR FAF+ F+
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFE 54
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 29.5 bits (63), Expect = 5.2
Identities = 17/70 (24%), Positives = 36/70 (51%)
Frame = +1
Query: 490 KXFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 669
+ ++G L + SD ++ +FF +G + +V M + GF F+ F+ ++ +D +
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAV-- 52
Query: 670 PKRTIGGKEV 699
+ GKE+
Sbjct: 53 --HDLNGKEL 60
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 29.5 bits (63), Expect = 5.2
Identities = 10/33 (30%), Positives = 22/33 (66%)
Frame = +1
Query: 496 FVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 594
+VG L S +++D I F++ G++ + ++ FD+
Sbjct: 49 YVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 29.1 bits (62), Expect = 6.9
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 253 LFVGGLSWXPTXKXLRXHFGAYGEIXXINVKXDPNTGRSRGFAFIVFK 396
L++ L + T + + FG +G + I V NT +RG AF+V++
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRVG---NTAETRGTAFVVYE 65
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 29.1 bits (62), Expect = 6.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +1
Query: 250 KLFVGGLSWXPTXKXLRXHFGAYG 321
K+FVGG+ W T L+ FG +G
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFG 319
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,421,888
Number of Sequences: 27780
Number of extensions: 269290
Number of successful extensions: 716
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3474674514
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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