Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_C16
         (1249 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    28   0.65 
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    27   0.86 
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    27   0.86 
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    25   4.6  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 27.9 bits (59), Expect = 0.65
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 708 QHATRIYRRQIPSYRNKRRWDPNARRYPAG 797
           Q   R + RQ P++R K RW    RR+  G
Sbjct: 225 QPQQRRFHRQSPAHRRKPRWRRAGRRWKVG 254


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 27.5 bits (58), Expect = 0.86
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +3

Query: 672 RRTECRSEPEDQQHATRIYRRQIPSYRNKRRWDPNARRYPAGHGATLERE---RRDRSPD 842
           R+ + RS   D  H++        SY++KR   P     P   GAT E E    +DR   
Sbjct: 54  RKKQARSSNADSSHSSEEEESAGLSYKSKRSAQPEG---PRDQGATAELEIETEKDRDAQ 110

Query: 843 AL 848
           A+
Sbjct: 111 AI 112


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 27.5 bits (58), Expect = 0.86
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
 Frame = +3

Query: 672 RRTECRSEPEDQQHATRIYRRQIPSYRNKRRWDPNARRYPAGHGATLERE---RRDRSPD 842
           R+ + RS   D  H++        SY++KR   P     P   GAT E E    +DR   
Sbjct: 54  RKKQARSSNADSSHSSEEEESAGLSYKSKRSAQPEG---PRDQGATAELEIETEKDRDAQ 110

Query: 843 AL 848
           A+
Sbjct: 111 AI 112


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 25.0 bits (52), Expect = 4.6
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -3

Query: 539 RFEKRFGSTPVSGFKIDTPG*GCSGGDRSTVL 444
           R E +FGS    GF++D      SGGD S+ +
Sbjct: 144 RCEMKFGSWTYDGFQLDLQLQDESGGDISSFI 175


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,063,247
Number of Sequences: 2352
Number of extensions: 20740
Number of successful extensions: 47
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 142652703
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)