Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_C14
         (1301 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    31   0.097
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            29   0.15 
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   4.8  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   8.5  

>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 30.7 bits (66), Expect = 0.097
 Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
 Frame = -2

Query: 535 GAGGXGGGXXGGAX-KXXPPXPGGGG 461
           G GG GGG  GG       P PGGGG
Sbjct: 203 GGGGSGGGAPGGGGGSSGGPGPGGGG 228



 Score = 25.8 bits (54), Expect = 2.8
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 535 GAGGXGGGXXGGAXKXXPPXPGGGG 461
           G+GG   G  GG+     P  GGGG
Sbjct: 206 GSGGGAPGGGGGSSGGPGPGGGGGG 230



 Score = 24.6 bits (51), Expect = 6.4
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = -1

Query: 815 GXGGXPGGFXGGXPGXXXXPXGXXPP*MGGG 723
           G GG  GG  GG PG      G   P  GGG
Sbjct: 201 GAGG--GGSGGGAPGGGGGSSGGPGPGGGGG 229



 Score = 24.6 bits (51), Expect = 6.4
 Identities = 15/42 (35%), Positives = 15/42 (35%)
 Frame = -1

Query: 821 GGGXGGXPGGFXGGXPGXXXXPXGXXPP*MGGGFFGXXXGGG 696
           GGG  G PG   GG  G              GG  G   GGG
Sbjct: 215 GGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGG 256



 Score = 24.2 bits (50), Expect = 8.5
 Identities = 14/47 (29%), Positives = 15/47 (31%)
 Frame = -2

Query: 529 GGXGGGXXGGAXKXXPPXPGGGGXXXXXXXXXXXPRXGXXKXXPXGG 389
           GG  GG  G +    P   GGGG            R G       GG
Sbjct: 209 GGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGG 255


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 29.5 bits (63), Expect = 0.22
 Identities = 23/76 (30%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
 Frame = +1

Query: 550 GXXVXPPPGGGXXX-PPKXGXXPXKX----FXPKXPQRXXXPKRXXXGGFSXGPP-PPXX 711
           G    PPPGG     PP+    P       F P  P +   P        +  PP PP  
Sbjct: 529 GPPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPP 588

Query: 712 XPKNPPPIXGGXXPXG 759
            P  PPP      P G
Sbjct: 589 PPMGPPPSPLAGGPLG 604



 Score = 26.6 bits (56), Expect(2) = 0.15
 Identities = 16/44 (36%), Positives = 17/44 (38%)
 Frame = +3

Query: 390 PPXGXXFXXPXRGGGGGVXXGXXXPPPPGXGGXXFXAPPXXPPP 521
           PP G  +      GG     G   PPPPG G      P   PPP
Sbjct: 512 PPHGAGYDGRDLTGG---PLGPPPPPPPG-GAVLNIPPQFLPPP 551



 Score = 24.2 bits (50), Expect = 8.5
 Identities = 11/24 (45%), Positives = 11/24 (45%), Gaps = 2/24 (8%)
 Frame = +3

Query: 465 PPPGXG--GXXFXAPPXXPPPXPP 530
           PP G G  G      P  PPP PP
Sbjct: 512 PPHGAGYDGRDLTGGPLGPPPPPP 535



 Score = 24.2 bits (50), Expect = 8.5
 Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 7/56 (12%)
 Frame = +3

Query: 1020 PPPGXXNPXXPPRGXPP-------XXXGFXPXXXFFWXGXPXXXXXGGXPPPPXPP 1166
            PPPG      PP+  PP             P    F  G P        P PP PP
Sbjct: 534  PPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPP 589



 Score = 21.8 bits (44), Expect(2) = 0.15
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = +3

Query: 501 PPXXPPPXPPAP 536
           PP  PPP P  P
Sbjct: 582 PPAPPPPPPMGP 593


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = -2

Query: 535 GAGGXGGGXXGGAXKXXPPXPGGGG 461
           G GG GGG  G          GGGG
Sbjct: 657 GGGGGGGGSVGSGGIGSSSLGGGGG 681



 Score = 24.2 bits (50), Expect = 8.5
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -2

Query: 535 GAGGXGGGXXGGAXKXXPPXPGGGG 461
           G GG GGG   G+        GGGG
Sbjct: 656 GGGGGGGGGSVGSGGIGSSSLGGGG 680


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 8.5
 Identities = 10/29 (34%), Positives = 11/29 (37%)
 Frame = +3

Query: 450 GXXXPPPPGXGGXXFXAPPXXPPPXPPAP 536
           G   PPP G G     + P      PP P
Sbjct: 764 GGGGPPPDGSGSGSRCSKPSVTSTTPPTP 792


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.317    0.158    0.566 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 852,024
Number of Sequences: 2352
Number of extensions: 17652
Number of successful extensions: 112
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 97
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 150010149
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)