Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_C13
(1179 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 155 6e-38
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 155 6e-38
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 77 2e-14
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 76 4e-14
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 76 4e-14
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 50 3e-06
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 40 0.003
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 37 0.024
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 33 0.52
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 31 1.2
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 31 1.2
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 29 4.8
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 29 8.4
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 155 bits (376), Expect = 6e-38
Identities = 79/123 (64%), Positives = 89/123 (72%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 256 NIQKESTLHLVLXLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTN 435
NIQKESTLHLVL LRGG IEPSLR LA KYNC+K ICRKCYARL PRA+NCRK KCGH++
Sbjct: 60 NIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSS 119
Query: 436 NLR 444
LR
Sbjct: 120 ELR 122
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 155 bits (376), Expect = 6e-38
Identities = 79/123 (64%), Positives = 89/123 (72%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 256 NIQKESTLHLVLXLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTN 435
NIQKESTLHLVL LRGG IEPSLR LA KYNC+K ICRKCYARL PRA+NCRK KCGH++
Sbjct: 60 NIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSS 119
Query: 436 NLR 444
LR
Sbjct: 120 ELR 122
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 77.4 bits (182), Expect = 2e-14
Identities = 45/79 (56%), Positives = 51/79 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 819
Query: 256 NIQKESTLHLVLXLRGGTI 312
NIQKESTLHLVL LRGG I
Sbjct: 820 NIQKESTLHLVLRLRGGDI 838
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 60 NIQKESTLHLVLRLRGG 76
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 136 NIQKESTLHLVLRLRGG 152
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 211
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 212 NIQKESTLHLVLRLRGG 228
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 287
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 288 NIQKESTLHLVLRLRGG 304
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 363
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 364 NIQKESTLHLVLRLRGG 380
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 439
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 440 NIQKESTLHLVLRLRGG 456
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 515
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 516 NIQKESTLHLVLRLRGG 532
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 591
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 592 NIQKESTLHLVLRLRGG 608
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 667
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 668 NIQKESTLHLVLRLRGG 684
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 743
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 744 NIQKESTLHLVLRLRGG 760
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 60 NIQKESTLHLVLRLRGG 76
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 136 NIQKESTLHLVLRLRGG 152
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 211
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 212 NIQKESTLHLVLRLRGG 228
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 287
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 288 NIQKESTLHLVLRLRGG 304
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 363
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 364 NIQKESTLHLVLRLRGG 380
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 381 MQIFVKTLIGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 439
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 440 NIQKESTLHLVLRLRGG 456
Score = 39.9 bits (89), Expect = 0.003
Identities = 20/26 (76%), Positives = 20/26 (76%)
Frame = +2
Query: 92 KPXRGXPITLEVEASDTXENVKAKIQ 169
K G ITLEVEASDT ENVKAKIQ
Sbjct: 462 KTLTGKTITLEVEASDTIENVKAKIQ 487
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 60 NIQKESTLHLVLRLRGG 76
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 77 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 135
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 136 NIQKESTLHLVLRLRGG 152
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 153 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 211
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 212 NIQKESTLHLVLRLRGG 228
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 229 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 287
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 288 NIQKESTLHLVLRLRGG 304
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 305 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 363
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 364 NIQKESTLHLVLRLRGG 380
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 381 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 439
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 440 NIQKESTLHLVLRLRGG 456
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 457 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 515
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 516 NIQKESTLHLVLRLRGG 532
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 533 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 591
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 592 NIQKESTLHLVLRLRGG 608
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 609 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 667
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 668 NIQKESTLHLVLRLRGG 684
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/77 (57%), Positives = 50/77 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 685 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 743
Query: 256 NIQKESTLHLVLXLRGG 306
NIQKESTLHLVL LRGG
Sbjct: 744 NIQKESTLHLVLRLRGG 760
Score = 76.2 bits (179), Expect = 4e-14
Identities = 44/79 (55%), Positives = 51/79 (64%)
Frame = +1
Query: 76 MQIFVKTLXGXAHYIGGGSFRHXRKCQS*NPSPRKVFLQXQQRLIFAGKQLEXGRTLSDY 255
MQIFVKTL G + + ++ ++ QQRLIFAGKQLE GRTLSDY
Sbjct: 761 MQIFVKTLTGKTITLEVEASDTIENVKA-KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 819
Query: 256 NIQKESTLHLVLXLRGGTI 312
NIQK+STLHLVL LRGG I
Sbjct: 820 NIQKQSTLHLVLRLRGGDI 838
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 50.0 bits (114), Expect = 3e-06
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +1
Query: 196 QQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLXLRGG 306
QQRLIFAGKQ+ +T +DY + S LHLVL LRGG
Sbjct: 40 QQRLIFAGKQMNDDKTAADYKVLGGSVLHLVLALRGG 76
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 39.9 bits (89), Expect = 0.003
Identities = 20/26 (76%), Positives = 20/26 (76%)
Frame = +2
Query: 92 KPXRGXPITLEVEASDTXENVKAKIQ 169
K G ITLEVEASDT ENVKAKIQ
Sbjct: 6 KTLTGKTITLEVEASDTIENVKAKIQ 31
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 37.1 bits (82), Expect = 0.024
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = +1
Query: 196 QQRLIFAGKQLEXGRTLSDYNIQKESTLHLV 288
QQRLIF QLE R L YNI+ E +HLV
Sbjct: 200 QQRLIFGRAQLENDRALFAYNIRDEDIIHLV 230
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 32.7 bits (71), Expect = 0.52
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = +1
Query: 205 LIFAGKQLEXGRTLSDYNIQKESTL 279
L F+GK+LE ++ DYNIQK ST+
Sbjct: 195 LSFSGKRLEDHCSIGDYNIQKSSTI 219
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 196 QQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLXLRGG 306
+QRL +AG+QLE SD I E+T+++ L L GG
Sbjct: 38 EQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 31.5 bits (68), Expect = 1.2
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +1
Query: 196 QQRLIFAGKQLEXGRTLSDYNIQKESTLHLVLXLRGG 306
+QRL +AG+QLE SD I E+T+++ L L GG
Sbjct: 38 EQRLCYAGRQLED----SDCGIDSEATIYVNLELLGG 70
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 29.5 bits (63), Expect = 4.8
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 364 CRKCYARLHPRATNCRKTKCGHT 432
CR CY H + R +CGHT
Sbjct: 63 CRVCYDEYHSSSNQARVLQCGHT 85
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 28.7 bits (61), Expect = 8.4
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 202 RLIFAGKQLEXGRTLSDYNIQKESTLHL 285
R++ K LE TL+ YNIQ+ STL L
Sbjct: 214 RMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,795,994
Number of Sequences: 27780
Number of extensions: 332245
Number of successful extensions: 684
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 569
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3224247522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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