Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_C12
         (1235 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    24   2.0  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   4.7  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   6.2  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   6.2  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   8.2  

>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 24.2 bits (50), Expect = 2.0
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = -2

Query: 862 FDKCHSHLRFNCDFNPKCITYLF 794
           FD  + H +   D    C+TY+F
Sbjct: 182 FDMFYQHHKIVLDMGKNCVTYVF 204


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 4.7
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = +2

Query: 686 LPPLPVGHSTTVTLKLVAPSTSGTHKSFFHLVTD 787
           L  L +GH++ +TL++   S  G   +  HL  D
Sbjct: 420 LASLNLGHNSQLTLEINGLSFQGLEYTLLHLNLD 453


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 579 RAPGSKLPVGPSD 541
           RAPG+K  VGP D
Sbjct: 26  RAPGAKKKVGPID 38


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 6.2
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3

Query: 579 RAPGSKLPVGPSD 541
           RAPG+K  VGP D
Sbjct: 26  RAPGAKKKVGPID 38


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 8.2
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 563 LEPGARFDQNWSIVNTGTEQW 625
           + PG  F  ++++ N+GT  W
Sbjct: 157 IHPGMTFRYHFNVHNSGTHFW 177


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,399
Number of Sequences: 336
Number of extensions: 3735
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 36171872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)