Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_C12
(1235 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069316-1|AAL39461.1| 303|Drosophila melanogaster LD03052p pro... 80 5e-15
AE014298-2564|AAO41692.1| 303|Drosophila melanogaster CG5445-PD... 80 5e-15
AE014298-2563|AAN09441.1| 303|Drosophila melanogaster CG5445-PC... 80 5e-15
AE014298-2562|AAF48724.1| 303|Drosophila melanogaster CG5445-PB... 80 5e-15
AE014298-2561|AAF48723.1| 303|Drosophila melanogaster CG5445-PA... 80 5e-15
>AY069316-1|AAL39461.1| 303|Drosophila melanogaster LD03052p
protein.
Length = 303
Score = 80.2 bits (189), Expect = 5e-15
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 1/160 (0%)
Frame = +2
Query: 344 LLLQFSCMHXTASXALIKQMQXLLGPXLNYNTASFFLXMXNWNLQAAICCYLXYTS-PKL 520
LL QFSCM T LI Q Q L+ +N +A F+L M NW+LQ A+ CYL + S L
Sbjct: 118 LLQQFSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYLDFCSLQSL 177
Query: 521 PSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVYLPPLP 700
PSM + + Q + + N GTE+WP C L P+ + +P L
Sbjct: 178 PSMKIVQEKQVNAQ-------QQAFQLQNDGTERWPNNCYLT----SPIQTQRINVPALR 226
Query: 701 VGHSTTVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTLWV 820
G + + ++ P+ T + L T G GD +W+
Sbjct: 227 PGETCDILADMM-PTQPPT---MWRLCTSNGWYFGDAIWM 262
>AE014298-2564|AAO41692.1| 303|Drosophila melanogaster CG5445-PD,
isoform D protein.
Length = 303
Score = 80.2 bits (189), Expect = 5e-15
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 1/160 (0%)
Frame = +2
Query: 344 LLLQFSCMHXTASXALIKQMQXLLGPXLNYNTASFFLXMXNWNLQAAICCYLXYTS-PKL 520
LL QFSCM T LI Q Q L+ +N +A F+L M NW+LQ A+ CYL + S L
Sbjct: 118 LLQQFSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYLDFCSLQSL 177
Query: 521 PSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVYLPPLP 700
PSM + + Q + + N GTE+WP C L P+ + +P L
Sbjct: 178 PSMKIVQEKQVNAQ-------QQAFQLQNDGTERWPNNCYLT----SPIQTQRINVPALR 226
Query: 701 VGHSTTVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTLWV 820
G + + ++ P+ T + L T G GD +W+
Sbjct: 227 PGETCDILADMM-PTQPPT---MWRLCTSNGWYFGDAIWM 262
>AE014298-2563|AAN09441.1| 303|Drosophila melanogaster CG5445-PC,
isoform C protein.
Length = 303
Score = 80.2 bits (189), Expect = 5e-15
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 1/160 (0%)
Frame = +2
Query: 344 LLLQFSCMHXTASXALIKQMQXLLGPXLNYNTASFFLXMXNWNLQAAICCYLXYTS-PKL 520
LL QFSCM T LI Q Q L+ +N +A F+L M NW+LQ A+ CYL + S L
Sbjct: 118 LLQQFSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYLDFCSLQSL 177
Query: 521 PSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVYLPPLP 700
PSM + + Q + + N GTE+WP C L P+ + +P L
Sbjct: 178 PSMKIVQEKQVNAQ-------QQAFQLQNDGTERWPNNCYLT----SPIQTQRINVPALR 226
Query: 701 VGHSTTVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTLWV 820
G + + ++ P+ T + L T G GD +W+
Sbjct: 227 PGETCDILADMM-PTQPPT---MWRLCTSNGWYFGDAIWM 262
>AE014298-2562|AAF48724.1| 303|Drosophila melanogaster CG5445-PB,
isoform B protein.
Length = 303
Score = 80.2 bits (189), Expect = 5e-15
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 1/160 (0%)
Frame = +2
Query: 344 LLLQFSCMHXTASXALIKQMQXLLGPXLNYNTASFFLXMXNWNLQAAICCYLXYTS-PKL 520
LL QFSCM T LI Q Q L+ +N +A F+L M NW+LQ A+ CYL + S L
Sbjct: 118 LLQQFSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYLDFCSLQSL 177
Query: 521 PSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVYLPPLP 700
PSM + + Q + + N GTE+WP C L P+ + +P L
Sbjct: 178 PSMKIVQEKQVNAQ-------QQAFQLQNDGTERWPNNCYLT----SPIQTQRINVPALR 226
Query: 701 VGHSTTVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTLWV 820
G + + ++ P+ T + L T G GD +W+
Sbjct: 227 PGETCDILADMM-PTQPPT---MWRLCTSNGWYFGDAIWM 262
>AE014298-2561|AAF48723.1| 303|Drosophila melanogaster CG5445-PA,
isoform A protein.
Length = 303
Score = 80.2 bits (189), Expect = 5e-15
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 1/160 (0%)
Frame = +2
Query: 344 LLLQFSCMHXTASXALIKQMQXLLGPXLNYNTASFFLXMXNWNLQAAICCYLXYTS-PKL 520
LL QFSCM T LI Q Q L+ +N +A F+L M NW+LQ A+ CYL + S L
Sbjct: 118 LLQQFSCMGTTDHEDLISQFQSLMNNQMNRESARFYLEMSNWSLQTAVGCYLDFCSLQSL 177
Query: 521 PSMSVKASEGPTGSLEPGARFDQNWSIVNTGTEQWPGCCRLIQAGGEPLGATPVYLPPLP 700
PSM + + Q + + N GTE+WP C L P+ + +P L
Sbjct: 178 PSMKIVQEKQVNAQ-------QQAFQLQNDGTERWPNNCYLT----SPIQTQRINVPALR 226
Query: 701 VGHSTTVTLKLVAPSTSGTHKSFFHLVTDKGEQIGDTLWV 820
G + + ++ P+ T + L T G GD +W+
Sbjct: 227 PGETCDILADMM-PTQPPT---MWRLCTSNGWYFGDAIWM 262
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,809,611
Number of Sequences: 53049
Number of extensions: 666537
Number of successful extensions: 1324
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1319
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6600886020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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