Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_C11
         (1183 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    26   0.74 
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   4.0  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   6.9  

>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 25.8 bits (54), Expect = 0.74
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = -3

Query: 401 VDDFRAGAVELGDEVRFGAVGVERAELAARVPEQHE 294
           + D   GA  +   +R   +G+ RA  A R+ E+HE
Sbjct: 418 IHDELLGADLVEHRIRHSQIGISRAMSALRILEKHE 453


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +3

Query: 132 MDSSGPRLYQQPTXKS--NRGIMLNAVEYCVFP 224
           MDS GP L+Q P  K   N GI+    E   +P
Sbjct: 347 MDSGGPVLWQNPRTKRLVNIGIISWGAECGKYP 379


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 752 KSIVTSQICSYPTSSPLFPPIY 687
           K+ V + +    T S +FPP+Y
Sbjct: 138 KAFVAAVLTRQDTQSVIFPPVY 159


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,620
Number of Sequences: 438
Number of extensions: 3931
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 40247334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)