Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_C07
(1219 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 40 0.004
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.18
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 34 0.18
Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical pr... 29 5.0
Z68009-4|CAA92006.1| 152|Caenorhabditis elegans Hypothetical pr... 29 6.7
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 29 6.7
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 29 6.7
U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific ... 29 8.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 8.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 8.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 8.8
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 39.9 bits (89), Expect = 0.004
Identities = 30/94 (31%), Positives = 31/94 (32%)
Frame = +3
Query: 432 GGGXGGFFXVXKXXXPXGXGGXXFGXXSVXPPXKXXAXGFGGGGGVXXXXXGGXGFXXXX 611
GGG GG G GG G + PP G GGGGG GG G
Sbjct: 26 GGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGC 85
Query: 612 GXXXXKXFXXXGXKRGXXPKRGGXGGFXXXAPPP 713
G G G GG GG PPP
Sbjct: 86 GGGG----GGCGGGGGGCGGGGGCGGGCAPPPPP 115
Score = 34.7 bits (76), Expect = 0.13
Identities = 27/86 (31%), Positives = 28/86 (32%)
Frame = +3
Query: 432 GGGXGGFFXVXKXXXPXGXGGXXFGXXSVXPPXKXXAXGFGGGGGVXXXXXGGXGFXXXX 611
GGG GG G GG G + PP G GGGGG GG G
Sbjct: 86 GGGGGG---CGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCG 142
Query: 612 GXXXXKXFXXXGXKRGXXPKRGGXGG 689
G G G GG GG
Sbjct: 143 GGGGGGCGGGGGGCGGGGGGCGGGGG 168
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 34.3 bits (75), Expect = 0.18
Identities = 28/91 (30%), Positives = 28/91 (30%), Gaps = 5/91 (5%)
Frame = +3
Query: 432 GGGXGGFFXVXKXXXPXGXG-----GXXFGXXSVXPPXKXXAXGFGGGGGVXXXXXGGXG 596
GGG GG P G G G G PP G GGGGG GG G
Sbjct: 39 GGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCG 98
Query: 597 FXXXXGXXXXKXFXXXGXKRGXXPKRGGXGG 689
G G G GG GG
Sbjct: 99 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGG 129
Score = 30.3 bits (65), Expect = 2.9
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +3
Query: 414 FFFFXXGGGXGGFFXVXKXXXPXGXGGXXFGXXSVXPPXKXXAXGFGGGGG 566
F F GGG GG G GG G PP G GGGGG
Sbjct: 20 FLFPSAGGGGGG------GGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGG 64
Score = 29.1 bits (62), Expect = 6.7
Identities = 23/87 (26%), Positives = 26/87 (29%), Gaps = 3/87 (3%)
Frame = +3
Query: 438 GXGGFFXVXKXXXPXGXGGXXFGXXSVXPPXKXXAXGFG---GGGGVXXXXXGGXGFXXX 608
G GG+ G GG G P G G GGGG GG G+
Sbjct: 177 GGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYATS 236
Query: 609 XGXXXXKXFXXXGXKRGXXPKRGGXGG 689
G + G G G GG
Sbjct: 237 GGGGSG-GYATGGSSGGGYSSGGSSGG 262
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 34.3 bits (75), Expect = 0.18
Identities = 28/91 (30%), Positives = 28/91 (30%), Gaps = 5/91 (5%)
Frame = +3
Query: 432 GGGXGGFFXVXKXXXPXGXG-----GXXFGXXSVXPPXKXXAXGFGGGGGVXXXXXGGXG 596
GGG GG P G G G G PP G GGGGG GG G
Sbjct: 39 GGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCG 98
Query: 597 FXXXXGXXXXKXFXXXGXKRGXXPKRGGXGG 689
G G G GG GG
Sbjct: 99 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGG 129
Score = 30.3 bits (65), Expect = 2.9
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +3
Query: 414 FFFFXXGGGXGGFFXVXKXXXPXGXGGXXFGXXSVXPPXKXXAXGFGGGGG 566
F F GGG GG G GG G PP G GGGGG
Sbjct: 20 FLFPSAGGGGGG------GGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGG 64
Score = 29.1 bits (62), Expect = 6.7
Identities = 23/87 (26%), Positives = 26/87 (29%), Gaps = 3/87 (3%)
Frame = +3
Query: 438 GXGGFFXVXKXXXPXGXGGXXFGXXSVXPPXKXXAXGFG---GGGGVXXXXXGGXGFXXX 608
G GG+ G GG G P G G GGGG GG G+
Sbjct: 177 GGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGGYATS 236
Query: 609 XGXXXXKXFXXXGXKRGXXPKRGGXGG 689
G + G G G GG
Sbjct: 237 GGGGSG-GYATGGSSGGGYSSGGSSGG 262
>Z70284-9|CAA94280.1| 290|Caenorhabditis elegans Hypothetical
protein K07F5.11 protein.
Length = 290
Score = 29.5 bits (63), Expect = 5.0
Identities = 18/69 (26%), Positives = 20/69 (28%)
Frame = +3
Query: 483 GXGGXXFGXXSVXPPXKXXAXGFGGGGGVXXXXXGGXGFXXXXGXXXXKXFXXXGXKRGX 662
G G PP + G GGGG G G G + G
Sbjct: 192 GAPGGGASALGAAPPAGSMSGGGGGGGATSGYFGVGQGVMGGGGAVGQSAYFGVGGGAAG 251
Query: 663 XPKRGGXGG 689
K GG GG
Sbjct: 252 GAKSGGGGG 260
>Z68009-4|CAA92006.1| 152|Caenorhabditis elegans Hypothetical
protein R09A8.4 protein.
Length = 152
Score = 29.1 bits (62), Expect = 6.7
Identities = 17/57 (29%), Positives = 20/57 (35%)
Frame = +2
Query: 641 KXXQKGXXPXKGGXGGXXPXGPPPXXXLKXXXXFLXGGXPXGXXKXPGFSPXKXPLG 811
K +KG +G G P GPP L F P G PG + P G
Sbjct: 59 KEGEKGAPGREGVRGEKGPSGPPGLPGLVGPKGFSGNSGPPGSPGEPGPEGEQGPAG 115
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 29.1 bits (62), Expect = 6.7
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 5/72 (6%)
Frame = +3
Query: 489 GGXXFGXXSVXPPXKXXAXGFGGGGGVXXXXXG-GXGFXXXXGXXXXKXFXXXG----XK 653
GG PP A G GGGGG G G G G + G
Sbjct: 271 GGGPSAFGGAPPPPSGSAMGGGGGGGATSAYFGVGSGAMGGGGAGAQSAYFGVGGGPVGG 330
Query: 654 RGXXPKRGGXGG 689
G K GG GG
Sbjct: 331 GGGGAKSGGGGG 342
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 29.1 bits (62), Expect = 6.7
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 5/72 (6%)
Frame = +3
Query: 489 GGXXFGXXSVXPPXKXXAXGFGGGGGVXXXXXG-GXGFXXXXGXXXXKXFXXXG----XK 653
GG PP A G GGGGG G G G G + G
Sbjct: 165 GGGPSAFGGAPPPPSGSAMGGGGGGGATSAYFGVGSGAMGGGGAGAQSAYFGVGGGPVGG 224
Query: 654 RGXXPKRGGXGG 689
G K GG GG
Sbjct: 225 GGGGAKSGGGGG 236
>U64609-1|AAB04598.1| 405|Caenorhabditis elegans Sperm-specific
family, class qprotein 2 protein.
Length = 405
Score = 28.7 bits (61), Expect = 8.8
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +3
Query: 435 GGXGGFFXVXKXXXPXGXGGXXFGXXSVXPPXKXXAXGFGGGGG 566
G +F V G G G + PP G GGGGG
Sbjct: 15 GAQSAYFGVGGGPAGGGGGASKVGGGAAPPPGTSVYMGAGGGGG 58
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.7 bits (61), Expect = 8.8
Identities = 26/116 (22%), Positives = 32/116 (27%), Gaps = 9/116 (7%)
Frame = -2
Query: 726 FKXXXGGGPXGKXPPXPPFXGFXPFWXXXXKXFXP----XXPPXXGXTXXPPXXXXKXXX 559
F+ P G PP PP G P P PP G PP
Sbjct: 225 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Query: 558 XXXXXXXXXXXGXKXXXPQKXNP-----XXPXXGXFXKPXKTPXPPPXXXKKKKXP 406
P + +P P G P T PPP +K++ P
Sbjct: 285 AGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 340
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.7 bits (61), Expect = 8.8
Identities = 26/116 (22%), Positives = 32/116 (27%), Gaps = 9/116 (7%)
Frame = -2
Query: 726 FKXXXGGGPXGKXPPXPPFXGFXPFWXXXXKXFXP----XXPPXXGXTXXPPXXXXKXXX 559
F+ P G PP PP G P P PP G PP
Sbjct: 246 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Query: 558 XXXXXXXXXXXGXKXXXPQKXNP-----XXPXXGXFXKPXKTPXPPPXXXKKKKXP 406
P + +P P G P T PPP +K++ P
Sbjct: 306 AGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 361
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.7 bits (61), Expect = 8.8
Identities = 26/116 (22%), Positives = 32/116 (27%), Gaps = 9/116 (7%)
Frame = -2
Query: 726 FKXXXGGGPXGKXPPXPPFXGFXPFWXXXXKXFXP----XXPPXXGXTXXPPXXXXKXXX 559
F+ P G PP PP G P P PP G PP
Sbjct: 231 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Query: 558 XXXXXXXXXXXGXKXXXPQKXNP-----XXPXXGXFXKPXKTPXPPPXXXKKKKXP 406
P + +P P G P T PPP +K++ P
Sbjct: 291 AGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAP 346
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,220,775
Number of Sequences: 27780
Number of extensions: 219568
Number of successful extensions: 550
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3359895476
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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