Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP26_F_C06
(1322 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1136 + 24218601-24218734,24218769-24219906 36 0.054
02_05_0686 - 30900748-30902167,30903442-30904742 36 0.071
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 34 0.22
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.67
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 33 0.67
03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776 32 1.2
04_04_1125 + 31085106-31085714 31 2.0
09_02_0543 + 10427321-10428315,10428440-10429154 30 4.7
11_04_0415 - 17395988-17396161,17397349-17397444,17397489-173980... 29 8.2
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 8.2
05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420 29 8.2
05_05_0374 + 24482085-24482418,24483294-24483571 29 8.2
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 36.3 bits (80), Expect = 0.054
Identities = 32/111 (28%), Positives = 32/111 (28%), Gaps = 1/111 (0%)
Frame = -2
Query: 955 PGXGXXXPPPPGGXGXPXXXGXXPXPPXXXPXXXXXGXAXXXXRXXGGPAPAXGPGXXXE 776
PG G P GG P G PP P G A GG A P
Sbjct: 92 PGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGA--PRRVLG 149
Query: 775 XXGGGXPRGEXPGXXRXRXGXXXPEXGGRKXGXXRR-XXXXRXNAPPPAPG 626
GGG PG R P GG G R P APG
Sbjct: 150 GGGGGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPG 200
Score = 32.3 bits (70), Expect = 0.88
Identities = 23/71 (32%), Positives = 23/71 (32%)
Frame = -2
Query: 952 GXGXXXPPPPGGXGXPXXXGXXPXPPXXXPXXXXXGXAXXXXRXXGGPAPAXGPGXXXEX 773
G G PP GG G G PP G A GGP A G G
Sbjct: 153 GGGALARPPGGGRG-----GALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGG 207
Query: 772 XGGGXPRGEXP 740
GGG G P
Sbjct: 208 LGGGGGEGGAP 218
Score = 31.9 bits (69), Expect = 1.2
Identities = 49/193 (25%), Positives = 50/193 (25%)
Frame = +3
Query: 486 GGGXXPXLXXXRXAXRXWGGVXWXXPTPGXRXXAXXRXGXAGGRXXXPGAGGGAFXRXXX 665
GGG P L GG P PG G A R G GGGA R
Sbjct: 113 GGGGPPSLPPGAG-----GGGGARPPAPGGGGG-----GGAPRRVLGGGGGGGALARPPG 162
Query: 666 XRRXXPXFRPPXSGXXXPXRXRXXPGXSPRGXPPPXXSXXXPGPXAGAGPPXXLXXXXAX 845
R RPP G PG +P G PG G G
Sbjct: 163 GGRGGALGRPPGGGGGG-----GGPGRAPGGGGGGGGPGRAPGGGGGGGGLGGGGGEGGA 217
Query: 846 PXXXXXGXXXGGXGXXPXXXGXPXPPGGGGXXXPXPGXXXXXXXXGXXXXXXGGGXXXXX 1025
P G GG G G GGGG G GGG
Sbjct: 218 P-ERVIGGGGGGGGALKCVVG-----GGGGGGGALKRAAGSGGGGGALECEIGGGGGGGG 271
Query: 1026 XXXXXXXXGXXGG 1064
G GG
Sbjct: 272 TDRNKGGGGGGGG 284
Score = 29.9 bits (64), Expect = 4.7
Identities = 26/91 (28%), Positives = 26/91 (28%)
Frame = +3
Query: 738 PGXSPRGXPPPXXSXXXPGPXAGAGPPXXLXXXXAXPXXXXXGXXXGGXGXXPXXXGXPX 917
P R P P P G G P L A P GG G P P
Sbjct: 72 PDPEARTTPRPLPIKLLGLPPGGGGAPGPLGGGGARP------PGGGGGGGPPSL--PPG 123
Query: 918 PPGGGGXXXPXPGXXXXXXXXGXXXXXXGGG 1010
GGGG P PG GGG
Sbjct: 124 AGGGGGARPPAPGGGGGGGAPRRVLGGGGGG 154
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 35.9 bits (79), Expect = 0.071
Identities = 20/73 (27%), Positives = 20/73 (27%)
Frame = -3
Query: 1011 PPPPXXXXXXPXXXXXXXXPXKGXXXPPPXGGXXXXPXXGXGPXXXXXXPRXXXXXAPXX 832
PPPP P PPP G P G P P P
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGG 372
Query: 831 XKGXXGAPPPXXG 793
KG PPP G
Sbjct: 373 KKGGPPPPPPKGG 385
Score = 35.1 bits (77), Expect = 0.12
Identities = 22/82 (26%), Positives = 24/82 (29%), Gaps = 1/82 (1%)
Frame = +3
Query: 693 PPXSGXXXPXRXRXXPGXSPRGXPPPXX-SXXXPGPXAGAGPPXXLXXXXAXPXXXXXGX 869
PP P P P+ PPP P P A PP + P G
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGG 372
Query: 870 XXGGXGXXPXXXGXPXPPGGGG 935
GG P G PP G
Sbjct: 373 KKGGPPPPPPKGGASRPPAAPG 394
Score = 29.1 bits (62), Expect = 8.2
Identities = 16/63 (25%), Positives = 16/63 (25%)
Frame = -2
Query: 1093 PPXXXXXXXXPPXXPXXXXXXXXXXXXXPPPXXXXXXPXXXXXXXXPGXGXXXPPPPGGX 914
PP PP P PPP P G PPP GG
Sbjct: 327 PPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGA 386
Query: 913 GXP 905
P
Sbjct: 387 SRP 389
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 34.3 bits (75), Expect = 0.22
Identities = 23/78 (29%), Positives = 23/78 (29%), Gaps = 5/78 (6%)
Frame = -2
Query: 1009 PPPXXXXXXPXXXXXXXXP-----GXGXXXPPPPGGXGXPXXXGXXPXPPXXXPXXXXXG 845
PPP P P G G PPPP P G P PP G
Sbjct: 322 PPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGG 381
Query: 844 XAXXXXRXXGGPAPAXGP 791
GGP A GP
Sbjct: 382 GGPPPPALPGGPR-ARGP 398
Score = 30.7 bits (66), Expect = 2.7
Identities = 28/103 (27%), Positives = 29/103 (28%), Gaps = 11/103 (10%)
Frame = +3
Query: 681 PXFRPPXSGXXXPXRXRXXPGXSPR-GXPPPXXSXXXPGPXA----GAGPPXXLXXXXAX 845
P PP +G P P G PP PG A GA PP
Sbjct: 273 PAAPPPPAGPPPPAPPPLPPSHHHHHGHHPPPPHPLPPGAGAGAGTGAPPPPPAHPAAPA 332
Query: 846 PXXXXXGXXXGGXG------XXPXXXGXPXPPGGGGXXXPXPG 956
P G G P P PPG G P PG
Sbjct: 333 PPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPG 375
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 32.7 bits (71), Expect = 0.67
Identities = 22/81 (27%), Positives = 23/81 (28%), Gaps = 2/81 (2%)
Frame = -1
Query: 617 PAPGXPXXXXRXPAXPRGGXXPXNPPPXXR--GXSRXXEXRXXPXPPXXSXXAPQTPTXS 444
P P P P P P PPP R G S P P + P P
Sbjct: 694 PPPLPPANRTNGPGVPSAPPPPPPPPPANRSNGPSAPAPPLPPPLPAAANKRNPPAPPPP 753
Query: 443 PXXVGXXXGARXXXPXPXPGP 381
P G A P P P
Sbjct: 754 PLMTGKKAPAPPPPPPQAPKP 774
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 32.7 bits (71), Expect = 0.67
Identities = 20/73 (27%), Positives = 20/73 (27%)
Frame = -3
Query: 1011 PPPPXXXXXXPXXXXXXXXPXKGXXXPPPXGGXXXXPXXGXGPXXXXXXPRXXXXXAPXX 832
PPPP P G P GG P G P AP
Sbjct: 1150 PPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPM 1209
Query: 831 XKGXXGAPPPXXG 793
G G PPP G
Sbjct: 1210 PPGVPGGPPPPPG 1222
Score = 31.9 bits (69), Expect = 1.2
Identities = 24/76 (31%), Positives = 24/76 (31%), Gaps = 9/76 (11%)
Frame = +3
Query: 756 GXPPPXXSXXXPGPXA--------GAGPPXXLXXXXAXPXXXXXGXXX-GGXGXXPXXXG 908
G PPP GP A G PP A P G GG P
Sbjct: 1147 GVPPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPA 1206
Query: 909 XPXPPGGGGXXXPXPG 956
P PPG G P PG
Sbjct: 1207 PPMPPGVPGGPPPPPG 1222
Score = 31.1 bits (67), Expect = 2.0
Identities = 24/84 (28%), Positives = 24/84 (28%), Gaps = 3/84 (3%)
Frame = +3
Query: 693 PPXSGXXXPXRXRXXPGXSPRGXPPPXXSXXX---PGPXAGAGPPXXLXXXXAXPXXXXX 863
PP G P P G PPP P P G G P
Sbjct: 1152 PPVGGLGGPPAP-PPPAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMP 1210
Query: 864 GXXXGGXGXXPXXXGXPXPPGGGG 935
GG P G P PPGG G
Sbjct: 1211 PGVPGGPPPPPGGRGLPAPPGGRG 1234
>03_03_0160 + 14957139-14957603,14958054-14958113,14959012-14959776
Length = 429
Score = 31.9 bits (69), Expect = 1.2
Identities = 15/46 (32%), Positives = 18/46 (39%)
Frame = +3
Query: 681 PXFRPPXSGXXXPXRXRXXPGXSPRGXPPPXXSXXXPGPXAGAGPP 818
P R P G + P +PRG PPP S P G+ P
Sbjct: 178 PQIRRPAQGPGFYMQRPPTPPPTPRGFPPPLPSPGAGAPRGGSATP 223
>04_04_1125 + 31085106-31085714
Length = 202
Score = 31.1 bits (67), Expect = 2.0
Identities = 17/59 (28%), Positives = 18/59 (30%)
Frame = -1
Query: 617 PAPGXPXXXXRXPAXPRGGXXPXNPPPXXRGXSRXXEXRXXPXPPXXSXXAPQTPTXSP 441
P P P PA P P PPP P P + P TPT P
Sbjct: 41 PPPCQPPPPTPTPATPTTPPTPWTPPPATPTPPTPTPWTPTPATPPPTPATPATPTTPP 99
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 29.9 bits (64), Expect = 4.7
Identities = 16/58 (27%), Positives = 18/58 (31%)
Frame = -1
Query: 554 PXNPPPXXRGXSRXXEXRXXPXPPXXSXXAPQTPTXSPXXVGXXXGARXXXPXPXPGP 381
P P P + P PP P PT +P A P P PGP
Sbjct: 15 PPRPTPAPQATPPPAIPESGPPPPPAPDMPPPPPTPAPQSSPAPPPAPDMTPPPGPGP 72
>11_04_0415 -
17395988-17396161,17397349-17397444,17397489-17398026,
17398106-17398422
Length = 374
Score = 29.1 bits (62), Expect = 8.2
Identities = 19/59 (32%), Positives = 20/59 (33%)
Frame = -2
Query: 847 GXAXXXXRXXGGPAPAXGPGXXXEXXGGGXPRGEXPGXXRXRXGXXXPEXGGRKXGXXR 671
G R GG P G GGG PRG G R G P G + G R
Sbjct: 10 GGGGGGPRGFGGGGPRGFGGGGPRGFGGGGPRGFGGGGPRG-FGGSKPRRGNGELGCGR 67
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.1 bits (62), Expect = 8.2
Identities = 28/117 (23%), Positives = 31/117 (26%), Gaps = 6/117 (5%)
Frame = -1
Query: 815 GPRPRXXAXXXXXXXRGGXPPGGXARXPPXPXGXXXPGXXGXKXGXXPXXXXXXXXXXXX 636
GP P G PP A PP P G P G P
Sbjct: 29 GPPPPQQPAYGHMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQM 88
Query: 635 XXRXXXPAP------GXPXXXXRXPAXPRGGXXPXNPPPXXRGXSRXXEXRXXPXPP 483
+ P P P P P P PPP + R E + P PP
Sbjct: 89 YYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPR--EAQLAPPPP 143
>05_07_0102 + 27700395-27700426,27701034-27702087,27703205-27703420
Length = 433
Score = 29.1 bits (62), Expect = 8.2
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -2
Query: 847 GXAXXXXRXXGGPAPAXGPGXXXEXXGGGXPRGEXPGXXRXRXG 716
G R GG P G G GGG PRG R G
Sbjct: 18 GGGGGGPRGCGGGGPRSGGGGGPRGGGGGGPRGSGSSKPRRGDG 61
>05_05_0374 + 24482085-24482418,24483294-24483571
Length = 203
Score = 29.1 bits (62), Expect = 8.2
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +3
Query: 267 GGRXXXXEXGGAXGSHRVTPFGGXWXXPXPPXXPXXVSWSXGR 395
GGR E G + RV G W PP P W GR
Sbjct: 112 GGRKCDVEVSG-DDAMRVVDVSGLWRAAPPPPPPDGRDWRAGR 153
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.153 0.517
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,058,283
Number of Sequences: 37544
Number of extensions: 481241
Number of successful extensions: 1276
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1124
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4143716112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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