Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_C05
         (1209 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    46   9e-07
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    46   9e-07
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    25   1.3  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              24   3.1  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    23   5.4  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 45.6 bits (103), Expect = 9e-07
 Identities = 57/241 (23%), Positives = 92/241 (38%), Gaps = 15/241 (6%)
 Frame = +3

Query: 300 PKYFAXXXXXXXXXXXXTHTAVVPLDLVKCRLQV--------DAEKYKNVVNGFKVSVRE 455
           P  FA            + T V P++ VK  LQV        + ++YK +++ F    +E
Sbjct: 7   PVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKE 66

Query: 456 EGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAASASAE 635
           +G     +G     I Y       F F + +K  + G +D  T +  R FV   AS  A 
Sbjct: 67  QGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQF-LRYFVGNLASGGAA 125

Query: 636 FIADIA-LSPMEAAKVRIQTMPGFASTLRE------AWPKMVKNEGYGTFYKGLVPLWGR 794
               +  + P++ A+ R+    G A   RE         K+ K +G    Y+G       
Sbjct: 126 GATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQG 185

Query: 795 QIPYTMMKFACFERTLELLYQYVVPKPREQCTKGEQLVVTFAAGYIAGVFCAIVSHPADT 974
            I Y    F  ++    +L     P P     K    ++++    +      IVS+P DT
Sbjct: 186 IIIYRAAYFGFYDTARGML-----PDP-----KKTPFLISWGIAQVVTTVAGIVSYPFDT 235

Query: 975 V 977
           V
Sbjct: 236 V 236


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 45.6 bits (103), Expect = 9e-07
 Identities = 57/241 (23%), Positives = 92/241 (38%), Gaps = 15/241 (6%)
 Frame = +3

Query: 300 PKYFAXXXXXXXXXXXXTHTAVVPLDLVKCRLQV--------DAEKYKNVVNGFKVSVRE 455
           P  FA            + T V P++ VK  LQV        + ++YK +++ F    +E
Sbjct: 7   PVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCFVRIPKE 66

Query: 456 EGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAASASAE 635
           +G     +G     I Y       F F + +K  + G +D  T +  R FV   AS  A 
Sbjct: 67  QGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQF-LRYFVGNLASGGAA 125

Query: 636 FIADIA-LSPMEAAKVRIQTMPGFASTLRE------AWPKMVKNEGYGTFYKGLVPLWGR 794
               +  + P++ A+ R+    G A   RE         K+ K +G    Y+G       
Sbjct: 126 GATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLYRGFGVSVQG 185

Query: 795 QIPYTMMKFACFERTLELLYQYVVPKPREQCTKGEQLVVTFAAGYIAGVFCAIVSHPADT 974
            I Y    F  ++    +L     P P     K    ++++    +      IVS+P DT
Sbjct: 186 IIIYRAAYFGFYDTARGML-----PDP-----KKTPFLISWGIAQVVTTVAGIVSYPFDT 235

Query: 975 V 977
           V
Sbjct: 236 V 236


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 388 HFTRSRGTTAVWVRPHDRTP 329
           HF  S G TA+W+ P +R+P
Sbjct: 58  HFIES-GITAIWLSPINRSP 76


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +1

Query: 916 LQLVTLPVCSALSSPIQPIRLCPNST 993
           L+  T P+C A       ++ CP  T
Sbjct: 70  LRAYTCPICGACGDIAHTVKYCPKGT 95


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 743 LDHLRPRLAEGARETRHGLD 684
           L+HLR  +AEG  + ++ LD
Sbjct: 435 LNHLRANVAEGRNQRKNVLD 454


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 305,099
Number of Sequences: 438
Number of extensions: 6644
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 41331843
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)