Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP26_F_C04
         (1203 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...   101   1e-23
AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochr...    27   0.37 
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    25   1.5  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    25   1.5  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    25   1.5  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    24   2.6  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    24   2.6  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    23   4.6  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   6.0  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    23   6.0  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   6.0  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score =  101 bits (242), Expect = 1e-23
 Identities = 64/174 (36%), Positives = 95/174 (54%), Gaps = 6/174 (3%)
 Frame = +3

Query: 477 TALEGTVCEPTLL-GIKDMGFVTMTEIQAKAIPPLLEGRDLVGAAKTGSGKTLAFLIPSI 653
           T+ E +   P LL  +K  G+   T IQ  AIP +L GRDL+  A+TGSGKT AF++P I
Sbjct: 158 TSFETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQTGSGKTAAFMLPII 217

Query: 654 DLIYKLKFKPRNGTG-----VIILSPTRELSMQTFGVLMELMKYHHHTYGLVMGGANRST 818
             +   K  P          V+I+SPTREL++Q      +          ++ GG + + 
Sbjct: 218 HNLLSDKNPPNTENNCAQPVVVIMSPTRELAIQIADQGKKFAYNSTVKVAVIYGGTSTNH 277

Query: 819 EAQKLSKGINILVATPGRLLDHLQNTPXFWYKNLQCLVIDEXDRILEXGFEEEV 980
           +  ++  G +ILVATPGRL D + N     + +L+  V+DE DR+L+ GF  +V
Sbjct: 278 QRGRILGGCHILVATPGRLKDFV-NRGNVSFNSLKYFVLDEADRMLDMGFLGDV 330


>AF264720-1|AAF75272.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q1 protein.
          Length = 126

 Score = 26.6 bits (56), Expect = 0.37
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = -3

Query: 745 PNVCIDNSLVGDKMMTPVPF-LGLNFSLYIRSIDGIKNASVFPEPVLAAPTRSLPSN 578
           P+V   +  +G  ++T   + L    +  I   D  +NA ++P+P    P R LP N
Sbjct: 60  PSVHFISRTLGQDLITTGGYTLPKESNAIIHIYDVHRNADIYPDPEKLDPDRFLPEN 116


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -3

Query: 745 PNVCIDNSLVGDKMMTPVPF-LGLNFSLYIRSIDGIKNASVFPEPVLAAPTRSLPSN 578
           P+V   + + G ++ T   + +  +  + ++  D   N +VFP+P    P R LP N
Sbjct: 360 PSVPFISRVSGSEIQTKTGYTIPKDCMVNLQIYDMHHNPNVFPDPEKFDPDRFLPEN 416


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = -3

Query: 745 PNVCIDNSLVGDKMMTPVPF-LGLNFSLYIRSIDGIKNASVFPEPVLAAPTRSLPSN 578
           P+V   +  +G+ M+T   + L     L +   D   N  ++PEP    P R LP N
Sbjct: 60  PSVHYISRELGEDMVTTTGYKLRKGTILQLHIYDLHYNPVIYPEPEKFDPDRFLPEN 116


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 24.6 bits (51), Expect = 1.5
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -3

Query: 745 PNVCIDNSLVGDKMMTPVPF-LGLNFSLYIRSIDGIKNASVFPEPVLAAPTRSLPSN 578
           P+V   + + G ++ T   + +  +  + ++  D   N +VFP+P    P R LP N
Sbjct: 360 PSVPFISRVSGSEIQTKTGYTIPKDCMVNLQIYDMHHNPNVFPDPEKFDPDRFLPEN 416


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 637 NASVFPEPVLAAPTRSLPSNK 575
           N   FPEP    P R LP N+
Sbjct: 95  NEKYFPEPEKFDPNRYLPENQ 115


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = -3

Query: 745 PNVCIDNSLVGDKMMTPVPFLGLNFSLYIRSI-DGIKNASVFPEPVLAAPTRSLPSN 578
           P+V + +  +G+ + T   +L    ++ I  I D   N  ++P+P    P R LP N
Sbjct: 60  PSVHLISRALGEDVRTQKGYLIPKDTITIIHIYDLHHNPDIYPDPEKFDPDRFLPEN 116


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = -3

Query: 667 LYIRSIDGIKNASVFPEPVLAAPTRSLPSN 578
           +++   D   N  V+P+P    P R LP N
Sbjct: 86  VHLHIYDMHHNPQVYPDPEKFDPDRFLPEN 115


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 637 NASVFPEPVLAAPTRSLPSN 578
           N +++P+P    P R LP N
Sbjct: 413 NPAIYPDPEKFDPDRFLPEN 432


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = -3

Query: 667 LYIRSIDGIKNASVFPEPVLAAPTRSLP 584
           L+I   D  +NA ++P+ +   P R LP
Sbjct: 86  LHIHIFDLHRNAEIYPDLLKFDPDRFLP 113


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 637 NASVFPEPVLAAPTRSLPSN 578
           N +++P+P    P R LP N
Sbjct: 413 NPAIYPDPEKFDPDRFLPEN 432


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,140
Number of Sequences: 336
Number of extensions: 4048
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 59
effective length of database: 102,761
effective search space used: 35041501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)